RNA–Protein interactions for RNA: ENST00000581298.5

SNX11-208, Transcript of sorting nexin 11, humanhuman

TSL 5

Gene SNX11, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-208ENST00000581298 QSER1Q2KHR3 1735 aa9.73□□□□□ -0.85
SNX11-208ENST00000581298 COL3A1P02461 1466 aaPredicted RBP9.73□□□□□ -0.85
SNX11-208ENST00000581298 SULT6B1Q6IMI4 303 aa9.73□□□□□ -0.85
SNX11-208ENST00000581298 MPRIPQ6WCQ1 1025 aa9.73□□□□□ -0.85
SNX11-208ENST00000581298 AEBP1Q8IUX7 1158 aa9.73□□□□□ -0.85
SNX11-208ENST00000581298 SYT17Q9BSW7 474 aa9.73□□□□□ -0.85
SNX11-208ENST00000581298 COL24A1Q17RW2 1714 aa9.73□□□□□ -0.85
SNX11-208ENST00000581298 TOGARAM1Q9Y4F4 1720 aa9.73□□□□□ -0.85
SNX11-208ENST00000581298 ATG3Q9NT62 314 aa9.72□□□□□ -0.85
SNX11-208ENST00000581298 KDM6AO15550 1401 aaPredicted RBP9.72□□□□□ -0.85
SNX11-208ENST00000581298 ITGB4P16144 1822 aa9.71□□□□□ -0.85
SNX11-208ENST00000581298 LOC102724428A0A0B4J2F2 783 aa9.71□□□□□ -0.86
SNX11-208ENST00000581298 DIAPH1O60610 1272 aaKnown RBP9.71□□□□□ -0.86
SNX11-208ENST00000581298 ZBTB7AO95365 584 aa9.71□□□□□ -0.86
SNX11-208ENST00000581298 SIK1P57059 783 aa9.71□□□□□ -0.86
SNX11-208ENST00000581298 AKAP4Q5JQC9 854 aa9.71□□□□□ -0.86
SNX11-208ENST00000581298 CC2D1BQ5T0F9 858 aaKnown RBP9.71□□□□□ -0.86
SNX11-208ENST00000581298 FLAD1Q8NFF5 587 aa9.71□□□□□ -0.86
SNX11-208ENST00000581298 TMOD3Q9NYL9 352 aa9.71□□□□□ -0.86
SNX11-208ENST00000581298 KCNQ4P56696 695 aa9.7□□□□□ -0.86
SNX11-208ENST00000581298 ZNF530Q6P9A1 599 aaPredicted RBP9.7□□□□□ -0.86
SNX11-208ENST00000581298 ASAP1Q9ULH1 1129 aa9.7□□□□□ -0.86
SNX11-208ENST00000581298 ZNF831Q5JPB2 1677 aa9.69□□□□□ -0.86
SNX11-208ENST00000581298 COL13A1Q5TAT6 717 aaPredicted RBP9.69□□□□□ -0.86
SNX11-208ENST00000581298 RC3H1Q5TC82 1133 aaKnown RBP9.69□□□□□ -0.86
SNX11-208ENST00000581298 COL23A1Q86Y22 540 aaPredicted RBP9.69□□□□□ -0.86
SNX11-208ENST00000581298 SLC4A9Q96Q91 983 aa9.69□□□□□ -0.86
SNX11-208ENST00000581298 FHDC1Q9C0D6 1143 aaPredicted RBP9.69□□□□□ -0.86
SNX11-208ENST00000581298 TFCP2L1Q9NZI6 479 aa9.69□□□□□ -0.86
SNX11-208ENST00000581298 ATF5Q9Y2D1 282 aaPredicted RBP9.69□□□□□ -0.86
SNX11-208ENST00000581298 PPP2R1AP30153 589 aa9.68□□□□□ -0.86
SNX11-208ENST00000581298 ITPK1Q13572 414 aa9.68□□□□□ -0.86
SNX11-208ENST00000581298 ARXQ96QS3 562 aa9.68□□□□□ -0.86
SNX11-208ENST00000581298 ADAMTS7Q9UKP4 1686 aa9.67□□□□□ -0.86
SNX11-208ENST00000581298 MRC1P22897 1456 aa9.67□□□□□ -0.86
SNX11-208ENST00000581298 RNMTO43148 476 aaKnown RBP9.67□□□□□ -0.86
SNX11-208ENST00000581298 SSFA2P28290 1259 aa9.67□□□□□ -0.86
SNX11-208ENST00000581298 MTHFSDQ2M296 383 aaKnown RBP9.67□□□□□ -0.86
SNX11-208ENST00000581298 C1orf141Q5JVX7 400 aa9.67□□□□□ -0.86
SNX11-208ENST00000581298 TNS4Q8IZW8 715 aa9.67□□□□□ -0.86
SNX11-208ENST00000581298 LINC00116Q8NCU8 138 aa9.67□□□□□ -0.86
SNX11-208ENST00000581298 TAF1LQ8IZX4 1826 aa9.67□□□□□ -0.86
SNX11-208ENST00000581298 CNTNAP4Q9C0A0 1308 aa9.66□□□□□ -0.86
SNX11-208ENST00000581298 CABP4P57796 275 aa9.66□□□□□ -0.86
SNX11-208ENST00000581298 AMIGO3Q86WK7 504 aa9.66□□□□□ -0.86
SNX11-208ENST00000581298 NFATC2IPQ8NCF5 419 aa9.66□□□□□ -0.86
SNX11-208ENST00000581298 SLC52A2Q9HAB3 445 aa9.66□□□□□ -0.86
SNX11-208ENST00000581298 TUBGCP6Q96RT7 1819 aa9.66□□□□□ -0.86
SNX11-208ENST00000581298 C4BP0C0L5 1744 aa9.65□□□□□ -0.86
SNX11-208ENST00000581298 C5P01031 1676 aa9.65□□□□□ -0.86
SNX11-208ENST00000581298 CICQ96RK0 1608 aaPredicted RBP9.65□□□□□ -0.86
SNX11-208ENST00000581298 FCHSD2O94868 740 aa9.65□□□□□ -0.86
SNX11-208ENST00000581298 HMOX1P09601 288 aa9.65□□□□□ -0.86
SNX11-208ENST00000581298 ATP6V1AP38606 617 aa9.65□□□□□ -0.86
SNX11-208ENST00000581298 GAS2L2Q8NHY3 880 aa9.65□□□□□ -0.86
SNX11-208ENST00000581298 CFAP53Q96M91 514 aa9.65□□□□□ -0.86
SNX11-208ENST00000581298 RSPH6AQ9H0K4 717 aa9.65□□□□□ -0.86
SNX11-208ENST00000581298 LGR6Q9HBX8 967 aa9.65□□□□□ -0.86
SNX11-208ENST00000581298 CEMIPQ8WUJ3 1361 aa9.64□□□□□ -0.87
SNX11-208ENST00000581298 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.64□□□□□ -0.87
SNX11-208ENST00000581298 RPS6KA4O75676 772 aa9.64□□□□□ -0.87
SNX11-208ENST00000581298 POLD1P28340 1107 aa9.64□□□□□ -0.87
SNX11-208ENST00000581298 GPR162Q16538 588 aa9.64□□□□□ -0.87
SNX11-208ENST00000581298 VSIG10Q8N0Z9 540 aa9.64□□□□□ -0.87
SNX11-208ENST00000581298 AK7Q96M32 723 aa9.64□□□□□ -0.87
SNX11-208ENST00000581298 NUDCQ9Y266 331 aa9.64□□□□□ -0.87
SNX11-208ENST00000581298 UBR3Q6ZT12 1888 aa9.64□□□□□ -0.87
SNX11-208ENST00000581298 DNAJC5GQ8N7S2 189 aa9.63□□□□□ -0.87
SNX11-208ENST00000581298 IL17REQ8NFR9 667 aa9.63□□□□□ -0.87
SNX11-208ENST00000581298 ZNF219Q9P2Y4 722 aaPredicted RBP9.63□□□□□ -0.87
SNX11-208ENST00000581298 SCN11AQ9UI33 1791 aa9.63□□□□□ -0.87
SNX11-208ENST00000581298 GNAT3A8MTJ3 354 aa9.62□□□□□ -0.87
SNX11-208ENST00000581298 HTATSF1O43719 755 aaKnown RBP9.62□□□□□ -0.87
SNX11-208ENST00000581298 APLP1P51693 650 aa9.62□□□□□ -0.87
SNX11-208ENST00000581298 RALBP1Q15311 655 aa9.62□□□□□ -0.87
SNX11-208ENST00000581298 PHACTR3Q96KR7 559 aa9.62□□□□□ -0.87
SNX11-208ENST00000581298 CD2APQ9Y5K6 639 aa9.62□□□□□ -0.87
SNX11-208ENST00000581298 U2SURPO15042 1029 aaKnown RBP9.61□□□□□ -0.87
SNX11-208ENST00000581298 INTS5Q6P9B9 1019 aaKnown RBP9.61□□□□□ -0.87
SNX11-208ENST00000581298 RTCBQ9Y3I0 505 aaKnown RBP9.61□□□□□ -0.87
SNX11-208ENST00000581298 MYH14Q7Z406 1995 aaKnown RBP9.61□□□□□ -0.87
SNX11-208ENST00000581298 GNPATO15228 680 aa9.6□□□□□ -0.87
SNX11-208ENST00000581298 CYP19A1P11511 503 aaPredicted RBP9.6□□□□□ -0.87
SNX11-208ENST00000581298 PRKAR2BP31323 418 aa9.6□□□□□ -0.87
SNX11-208ENST00000581298 TRAPPC3LQ5T215 181 aa9.6□□□□□ -0.87
SNX11-208ENST00000581298 ARHGEF1Q92888 912 aaKnown RBP9.6□□□□□ -0.87
SNX11-208ENST00000581298 PLEKHF1Q96S99 279 aa9.6□□□□□ -0.87
SNX11-208ENST00000581298 RBM42Q9BTD8 480 aaKnown RBP9.6□□□□□ -0.87
SNX11-208ENST00000581298 GPBP1L1Q9HC44 474 aaPredicted RBP9.6□□□□□ -0.87
SNX11-208ENST00000581298 KCPQ6ZWJ8 1503 aa9.6□□□□□ -0.87
SNX11-208ENST00000581298 COL5A3P25940 1745 aaPredicted RBP9.59□□□□□ -0.87
SNX11-208ENST00000581298 ABCB7O75027 752 aa9.59□□□□□ -0.87
SNX11-208ENST00000581298 PTCD1O75127 700 aaKnown RBP9.59□□□□□ -0.87
SNX11-208ENST00000581298 GYS1P13807 737 aa9.59□□□□□ -0.87
SNX11-208ENST00000581298 CRKLP46109 303 aaKnown RBP9.59□□□□□ -0.87
SNX11-208ENST00000581298 NLGN1Q8N2Q7 840 aa9.59□□□□□ -0.87
SNX11-208ENST00000581298 ATP10DQ9P241 1426 aa9.58□□□□□ -0.88
SNX11-208ENST00000581298 U2AF1L5P0DN76 240 aaPredicted RBP9.58□□□□□ -0.88
SNX11-208ENST00000581298 U2AF1Q01081 240 aaKnown RBP eCLIP9.58□□□□□ -0.88
SNX11-208ENST00000581298 SLC39A6Q13433 755 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms