RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.59□□□□□ -0.07
RFFL-209ENST00000581265 TOMM70O94826 608 aa14.59□□□□□ -0.07
RFFL-209ENST00000581265 PANK3Q9H999 370 aa14.59□□□□□ -0.07
RFFL-209ENST00000581265 ASAP1Q9ULH1 1129 aa14.59□□□□□ -0.07
RFFL-209ENST00000581265 TAF1LQ8IZX4 1826 aa14.59□□□□□ -0.07
RFFL-209ENST00000581265 HSPA5P11021 654 aaKnown RBP14.58□□□□□ -0.08
RFFL-209ENST00000581265 SSFA2P28290 1259 aa14.58□□□□□ -0.08
RFFL-209ENST00000581265 PRELPP51888 382 aa14.58□□□□□ -0.08
RFFL-209ENST00000581265 C16orf71Q8IYS4 520 aaPredicted RBP14.57□□□□□ -0.08
RFFL-209ENST00000581265 LINC00116Q8NCU8 138 aa14.57□□□□□ -0.08
RFFL-209ENST00000581265 ATG3Q9NT62 314 aa14.57□□□□□ -0.08
RFFL-209ENST00000581265 IGSF1Q8N6C5 1336 aa14.57□□□□□ -0.08
RFFL-209ENST00000581265 C4BP0C0L5 1744 aa14.57□□□□□ -0.08
RFFL-209ENST00000581265 ERVV-2B6SEH9 535 aa14.56□□□□□ -0.08
RFFL-209ENST00000581265 PHF14O94880 888 aa14.56□□□□□ -0.08
RFFL-209ENST00000581265 ATP6V1AP38606 617 aa14.56□□□□□ -0.08
RFFL-209ENST00000581265 ITPK1Q13572 414 aa14.56□□□□□ -0.08
RFFL-209ENST00000581265 SMIM5Q71RC9 77 aa14.56□□□□□ -0.08
RFFL-209ENST00000581265 HSP90AB1P08238 724 aaKnown RBP14.55□□□□□ -0.08
RFFL-209ENST00000581265 DCAF5Q96JK2 942 aa14.55□□□□□ -0.08
RFFL-209ENST00000581265 GOLGB1Q14789 3259 aaKnown RBP14.54□□□□□ -0.08
RFFL-209ENST00000581265 GNPATO15228 680 aa14.54□□□□□ -0.08
RFFL-209ENST00000581265 PLEKHO1Q53GL0 409 aaPredicted RBP14.54□□□□□ -0.08
RFFL-209ENST00000581265 KLRG1Q96E93 195 aa14.54□□□□□ -0.08
RFFL-209ENST00000581265 UBR3Q6ZT12 1888 aa14.53□□□□□ -0.08
RFFL-209ENST00000581265 AMOTQ4VCS5 1084 aa14.53□□□□□ -0.08
RFFL-209ENST00000581265 MORC1Q86VD1 984 aa14.53□□□□□ -0.08
RFFL-209ENST00000581265 SLC4A9Q96Q91 983 aa14.52□□□□□ -0.09
RFFL-209ENST00000581265 TRAPPC3LQ5T215 181 aa14.51□□□□□ -0.09
RFFL-209ENST00000581265 RC3H1Q5TC82 1133 aaKnown RBP14.51□□□□□ -0.09
RFFL-209ENST00000581265 KDRP35968 1356 aa14.5□□□□□ -0.09
RFFL-209ENST00000581265 CABP4P57796 275 aa14.5□□□□□ -0.09
RFFL-209ENST00000581265 HTRA3P83110 453 aa14.5□□□□□ -0.09
RFFL-209ENST00000581265 ZNF530Q6P9A1 599 aaPredicted RBP14.5□□□□□ -0.09
RFFL-209ENST00000581265 NLGN1Q8N2Q7 840 aa14.5□□□□□ -0.09
RFFL-209ENST00000581265 CCER1Q8TC90 406 aaPredicted RBP14.5□□□□□ -0.09
RFFL-209ENST00000581265 RBM42Q9BTD8 480 aaKnown RBP14.5□□□□□ -0.09
RFFL-209ENST00000581265 RTCBQ9Y3I0 505 aaKnown RBP14.5□□□□□ -0.09
RFFL-209ENST00000581265 KNSTRNQ9Y448 316 aa14.5□□□□□ -0.09
RFFL-209ENST00000581265 ADRA2BP18089 450 aa14.49□□□□□ -0.09
RFFL-209ENST00000581265 MTHFSP49914 203 aa14.49□□□□□ -0.09
RFFL-209ENST00000581265 AEBP1Q8IUX7 1158 aa14.49□□□□□ -0.09
RFFL-209ENST00000581265 JMYQ8N9B5 988 aa14.49□□□□□ -0.09
RFFL-209ENST00000581265 RBM46Q8TBY0 533 aaKnown RBP14.49□□□□□ -0.09
RFFL-209ENST00000581265 NMRK2Q9NPI5 230 aa14.49□□□□□ -0.09
RFFL-209ENST00000581265 RPS6KA4O75676 772 aa14.48□□□□□ -0.09
RFFL-209ENST00000581265 MMP10P09238 476 aa14.48□□□□□ -0.09
RFFL-209ENST00000581265 IL13P35225 146 aa14.48□□□□□ -0.09
RFFL-209ENST00000581265 SULT6B1Q6IMI4 303 aa14.48□□□□□ -0.09
RFFL-209ENST00000581265 ARHGAP27Q6ZUM4 889 aa14.48□□□□□ -0.09
RFFL-209ENST00000581265 ARHGEF1Q92888 912 aaKnown RBP14.48□□□□□ -0.09
RFFL-209ENST00000581265 KDM6AO15550 1401 aaPredicted RBP14.48□□□□□ -0.09
RFFL-209ENST00000581265 CNTNAP4Q9C0A0 1308 aa14.47□□□□□ -0.09
RFFL-209ENST00000581265 AMER1Q5JTC6 1135 aaPredicted RBP14.47□□□□□ -0.09
RFFL-209ENST00000581265 C1orf141Q5JVX7 400 aa14.47□□□□□ -0.09
RFFL-209ENST00000581265 NFATC2IPQ8NCF5 419 aa14.47□□□□□ -0.09
RFFL-209ENST00000581265 TGFB2P61812 414 aa14.46□□□□□ -0.09
RFFL-209ENST00000581265 FSTL1Q12841 308 aa14.46□□□□□ -0.09
RFFL-209ENST00000581265 BCS1LQ9Y276 419 aa14.46□□□□□ -0.09
RFFL-209ENST00000581265 WDR90Q96KV7 1748 aa14.46□□□□□ -0.1
RFFL-209ENST00000581265 ZNF831Q5JPB2 1677 aa14.46□□□□□ -0.1
RFFL-209ENST00000581265 RFC4P35249 363 aa14.45□□□□□ -0.1
RFFL-209ENST00000581265 PTCD1O75127 700 aaKnown RBP14.44□□□□□ -0.1
RFFL-209ENST00000581265 GYS1P13807 737 aa14.44□□□□□ -0.1
RFFL-209ENST00000581265 PER1O15534 1290 aaPredicted RBP14.43□□□□□ -0.1
RFFL-209ENST00000581265 KDM2BQ8NHM5 1336 aa14.42□□□□□ -0.1
RFFL-209ENST00000581265 CRKLP46109 303 aaKnown RBP14.42□□□□□ -0.1
RFFL-209ENST00000581265 AKAP4Q5JQC9 854 aa14.42□□□□□ -0.1
RFFL-209ENST00000581265 KIF7Q2M1P5 1343 aa14.41□□□□□ -0.1
RFFL-209ENST00000581265 A0A0G2JLW4 131 aa14.41□□□□□ -0.1
RFFL-209ENST00000581265 FCHSD2O94868 740 aa14.41□□□□□ -0.1
RFFL-209ENST00000581265 HSPA1AP0DMV8 641 aaKnown RBP14.41□□□□□ -0.1
RFFL-209ENST00000581265 HSPA1BP0DMV9 641 aaKnown RBP14.41□□□□□ -0.1
RFFL-209ENST00000581265 CCDC87Q9NVE4 849 aa14.41□□□□□ -0.1
RFFL-209ENST00000581265 PARP3Q9Y6F1 533 aa14.41□□□□□ -0.1
RFFL-209ENST00000581265 MYH14Q7Z406 1995 aaKnown RBP14.41□□□□□ -0.1
RFFL-209ENST00000581265 PXDNLA1KZ92 1463 aa14.4□□□□□ -0.1
RFFL-209ENST00000581265 C9orf131Q5VYM1 1079 aa14.4□□□□□ -0.1
RFFL-209ENST00000581265 INTS5Q6P9B9 1019 aaKnown RBP14.4□□□□□ -0.1
RFFL-209ENST00000581265 SLC52A2Q9HAB3 445 aa14.4□□□□□ -0.1
RFFL-209ENST00000581265 COL5A3P25940 1745 aaPredicted RBP14.4□□□□□ -0.1
RFFL-209ENST00000581265 C10orf71Q711Q0 1435 aa14.4□□□□□ -0.1
RFFL-209ENST00000581265 DPEP1P16444 411 aa14.39□□□□□ -0.11
RFFL-209ENST00000581265 SMC1BQ8NDV3 1235 aa14.39□□□□□ -0.11
RFFL-209ENST00000581265 RRAGCQ9HB90 399 aa14.39□□□□□ -0.11
RFFL-209ENST00000581265 LGR6Q9HBX8 967 aa14.39□□□□□ -0.11
RFFL-209ENST00000581265 KIF13BQ9NQT8 1826 aa14.38□□□□□ -0.11
RFFL-209ENST00000581265 CICQ96RK0 1608 aaPredicted RBP14.38□□□□□ -0.11
RFFL-209ENST00000581265 KCNA3P22001 575 aa14.38□□□□□ -0.11
RFFL-209ENST00000581265 SRP68Q9UHB9 627 aaKnown RBP14.38□□□□□ -0.11
RFFL-209ENST00000581265 USP42Q9H9J4 1324 aaKnown RBP14.38□□□□□ -0.11
RFFL-209ENST00000581265 RNMTO43148 476 aaKnown RBP14.37□□□□□ -0.11
RFFL-209ENST00000581265 DIAPH1O60610 1272 aaKnown RBP14.37□□□□□ -0.11
RFFL-209ENST00000581265 HMOX1P09601 288 aa14.37□□□□□ -0.11
RFFL-209ENST00000581265 FKBP8Q14318 412 aa14.37□□□□□ -0.11
RFFL-209ENST00000581265 SLC34A2O95436 690 aa14.36□□□□□ -0.11
RFFL-209ENST00000581265 TM4SF1P30408 202 aa14.36□□□□□ -0.11
RFFL-209ENST00000581265 MTHFSDQ2M296 383 aaKnown RBP14.36□□□□□ -0.11
RFFL-209ENST00000581265 DNAJC10Q8IXB1 793 aa14.36□□□□□ -0.11
RFFL-209ENST00000581265 C4AP0C0L4 1744 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms