RNA–Protein interactions for RNA: ENST00000581250.5

PPP4R1-219, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-219ENST00000581250 U2AF1Q01081 240 aaKnown RBP eCLIP15.94■□□□□ 0.14
PPP4R1-219ENST00000581250 RBM42Q9BTD8 480 aaKnown RBP15.94■□□□□ 0.14
PPP4R1-219ENST00000581250 MTFR1LQ9H019 292 aa15.94■□□□□ 0.14
PPP4R1-219ENST00000581250 LGR6Q9HBX8 967 aa15.94■□□□□ 0.14
PPP4R1-219ENST00000581250 NUDCQ9Y266 331 aa15.94■□□□□ 0.14
PPP4R1-219ENST00000581250 MRC1P22897 1456 aa15.94■□□□□ 0.14
PPP4R1-219ENST00000581250 ADAMTS7Q9UKP4 1686 aa15.94■□□□□ 0.14
PPP4R1-219ENST00000581250 ATP6V1AP38606 617 aa15.93■□□□□ 0.14
PPP4R1-219ENST00000581250 PTGER2P43116 358 aa15.93■□□□□ 0.14
PPP4R1-219ENST00000581250 ITPK1Q13572 414 aa15.93■□□□□ 0.14
PPP4R1-219ENST00000581250 NFATC2IPQ8NCF5 419 aa15.93■□□□□ 0.14
PPP4R1-219ENST00000581250 LINC00116Q8NCU8 138 aa15.93■□□□□ 0.14
PPP4R1-219ENST00000581250 AK7Q96M32 723 aa15.93■□□□□ 0.14
PPP4R1-219ENST00000581250 RSPH6AQ9H0K4 717 aa15.93■□□□□ 0.14
PPP4R1-219ENST00000581250 COL5A3P25940 1745 aaPredicted RBP15.93■□□□□ 0.14
PPP4R1-219ENST00000581250 MAP3K5Q99683 1374 aa15.92■□□□□ 0.14
PPP4R1-219ENST00000581250 RNMTO43148 476 aaKnown RBP15.92■□□□□ 0.14
PPP4R1-219ENST00000581250 SMIM5Q71RC9 77 aa15.92■□□□□ 0.14
PPP4R1-219ENST00000581250 PTCD1O75127 700 aaKnown RBP15.91■□□□□ 0.14
PPP4R1-219ENST00000581250 PHF14O94880 888 aa15.91■□□□□ 0.14
PPP4R1-219ENST00000581250 AMIGO3Q86WK7 504 aa15.91■□□□□ 0.14
PPP4R1-219ENST00000581250 PHACTR3Q96KR7 559 aa15.91■□□□□ 0.14
PPP4R1-219ENST00000581250 ZNF831Q5JPB2 1677 aa15.9■□□□□ 0.14
PPP4R1-219ENST00000581250 MSL1Q68DK7 614 aa15.9■□□□□ 0.14
PPP4R1-219ENST00000581250 COL23A1Q86Y22 540 aaPredicted RBP15.9■□□□□ 0.14
PPP4R1-219ENST00000581250 GAS2L2Q8NHY3 880 aa15.9■□□□□ 0.14
PPP4R1-219ENST00000581250 SLC4A9Q96Q91 983 aa15.9■□□□□ 0.14
PPP4R1-219ENST00000581250 SLC52A2Q9HAB3 445 aa15.9■□□□□ 0.14
PPP4R1-219ENST00000581250 TJP1Q07157 1748 aa15.9■□□□□ 0.14
PPP4R1-219ENST00000581250 COL24A1Q17RW2 1714 aa15.88■□□□□ 0.13
PPP4R1-219ENST00000581250 SIPA1L3O60292 1781 aaPredicted RBP15.88■□□□□ 0.13
PPP4R1-219ENST00000581250 GNPATO15228 680 aa15.88■□□□□ 0.13
PPP4R1-219ENST00000581250 SLC39A6Q13433 755 aa15.88■□□□□ 0.13
PPP4R1-219ENST00000581250 RALBP1Q15311 655 aa15.88■□□□□ 0.13
PPP4R1-219ENST00000581250 SGIP1Q9BQI5 828 aa15.88■□□□□ 0.13
PPP4R1-219ENST00000581250 MYH14Q7Z406 1995 aaKnown RBP15.87■□□□□ 0.13
PPP4R1-219ENST00000581250 GNAT3A8MTJ3 354 aa15.87■□□□□ 0.13
PPP4R1-219ENST00000581250 SLC16A10Q8TF71 515 aa15.87■□□□□ 0.13
PPP4R1-219ENST00000581250 UBR2Q8IWV8 1755 aa15.86■□□□□ 0.13
PPP4R1-219ENST00000581250 KCPQ6ZWJ8 1503 aa15.86■□□□□ 0.13
PPP4R1-219ENST00000581250 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.86■□□□□ 0.13
PPP4R1-219ENST00000581250 CICQ96RK0 1608 aaPredicted RBP15.86■□□□□ 0.13
PPP4R1-219ENST00000581250 DLG5Q8TDM6 1919 aa15.86■□□□□ 0.13
PPP4R1-219ENST00000581250 FCHSD2O94868 740 aa15.85■□□□□ 0.13
PPP4R1-219ENST00000581250 HMGB2P26583 209 aaKnown RBP15.85■□□□□ 0.13
PPP4R1-219ENST00000581250 KLHL34Q8N239 644 aa15.85■□□□□ 0.13
PPP4R1-219ENST00000581250 IL17REQ8NFR9 667 aa15.85■□□□□ 0.13
PPP4R1-219ENST00000581250 ARXQ96QS3 562 aa15.85■□□□□ 0.13
PPP4R1-219ENST00000581250 FHDC1Q9C0D6 1143 aaPredicted RBP15.85■□□□□ 0.13
PPP4R1-219ENST00000581250 MYBBP1AQ9BQG0 1328 aaKnown RBP15.85■□□□□ 0.13
PPP4R1-219ENST00000581250 SSFA2P28290 1259 aa15.84■□□□□ 0.13
PPP4R1-219ENST00000581250 POLD1P28340 1107 aa15.84■□□□□ 0.13
PPP4R1-219ENST00000581250 TEFQ10587 303 aa15.84■□□□□ 0.13
PPP4R1-219ENST00000581250 FLAD1Q8NFF5 587 aa15.84■□□□□ 0.13
PPP4R1-219ENST00000581250 C4AP0C0L4 1744 aa15.84■□□□□ 0.13
PPP4R1-219ENST00000581250 CRKLP46109 303 aaKnown RBP15.82■□□□□ 0.12
PPP4R1-219ENST00000581250 MCM10Q7L590 875 aa15.82■□□□□ 0.12
PPP4R1-219ENST00000581250 CNTNAP4Q9C0A0 1308 aa15.82■□□□□ 0.12
PPP4R1-219ENST00000581250 DCTN1Q14203 1278 aa15.81■□□□□ 0.12
PPP4R1-219ENST00000581250 DNAJC10Q8IXB1 793 aa15.81■□□□□ 0.12
PPP4R1-219ENST00000581250 CEMIPQ8WUJ3 1361 aa15.81■□□□□ 0.12
PPP4R1-219ENST00000581250 RTCBQ9Y3I0 505 aaKnown RBP15.81■□□□□ 0.12
PPP4R1-219ENST00000581250 NEFMP07197 916 aa15.8■□□□□ 0.12
PPP4R1-219ENST00000581250 TTC5Q8N0Z6 440 aa15.8■□□□□ 0.12
PPP4R1-219ENST00000581250 RTF1Q92541 710 aaKnown RBP15.8■□□□□ 0.12
PPP4R1-219ENST00000581250 SYT17Q9BSW7 474 aa15.8■□□□□ 0.12
PPP4R1-219ENST00000581250 PRKRIP1Q9H875 184 aaPredicted RBP15.8■□□□□ 0.12
PPP4R1-219ENST00000581250 MAPK8IP3Q9UPT6 1336 aa15.79■□□□□ 0.12
PPP4R1-219ENST00000581250 RC3H1Q5TC82 1133 aaKnown RBP15.79■□□□□ 0.12
PPP4R1-219ENST00000581250 PLEKHF1Q96S99 279 aa15.78■□□□□ 0.12
PPP4R1-219ENST00000581250 ZNF316A6NFI3 1004 aaPredicted RBP15.77■□□□□ 0.12
PPP4R1-219ENST00000581250 BTBD11A6QL63 1104 aa15.77■□□□□ 0.12
PPP4R1-219ENST00000581250 KCNQ3O43525 872 aa15.77■□□□□ 0.12
PPP4R1-219ENST00000581250 RPS6KA4O75676 772 aa15.77■□□□□ 0.12
PPP4R1-219ENST00000581250 TRAPPC3LQ5T215 181 aa15.77■□□□□ 0.12
PPP4R1-219ENST00000581250 ZNF790Q6PG37 636 aa15.77■□□□□ 0.12
PPP4R1-219ENST00000581250 ARHGEF1Q92888 912 aaKnown RBP15.77■□□□□ 0.12
PPP4R1-219ENST00000581250 ZNF496Q96IT1 587 aaPredicted RBP15.77■□□□□ 0.12
PPP4R1-219ENST00000581250 CCDC87Q9NVE4 849 aa15.77■□□□□ 0.12
PPP4R1-219ENST00000581250 NFE2L2Q16236 605 aa15.76■□□□□ 0.11
PPP4R1-219ENST00000581250 INTS5Q6P9B9 1019 aaKnown RBP15.76■□□□□ 0.11
PPP4R1-219ENST00000581250 HEG1Q9ULI3 1381 aa15.75■□□□□ 0.11
PPP4R1-219ENST00000581250 CYP19A1P11511 503 aaPredicted RBP15.75■□□□□ 0.11
PPP4R1-219ENST00000581250 ADRA2BP18089 450 aa15.75■□□□□ 0.11
PPP4R1-219ENST00000581250 RFC4P35249 363 aa15.75■□□□□ 0.11
PPP4R1-219ENST00000581250 WDR43Q15061 677 aaKnown RBP eCLIP15.75■□□□□ 0.11
PPP4R1-219ENST00000581250 CCDC146Q8IYE0 955 aa15.75■□□□□ 0.11
PPP4R1-219ENST00000581250 NLGN2Q8NFZ4 835 aa15.75■□□□□ 0.11
PPP4R1-219ENST00000581250 THUMPD2Q9BTF0 503 aaKnown RBP15.75■□□□□ 0.11
PPP4R1-219ENST00000581250 SRP68Q9UHB9 627 aaKnown RBP15.75■□□□□ 0.11
PPP4R1-219ENST00000581250 ZBTB1Q9Y2K1 713 aa15.75■□□□□ 0.11
PPP4R1-219ENST00000581250 GOLGB1Q14789 3259 aaKnown RBP15.75■□□□□ 0.11
PPP4R1-219ENST00000581250 SOS1Q07889 1333 aaPredicted RBP15.73■□□□□ 0.11
PPP4R1-219ENST00000581250 KDM3BQ7LBC6 1761 aa15.73■□□□□ 0.11
PPP4R1-219ENST00000581250 HTATSF1O43719 755 aaKnown RBP15.73■□□□□ 0.11
PPP4R1-219ENST00000581250 MMP10P09238 476 aa15.73■□□□□ 0.11
PPP4R1-219ENST00000581250 VSIG10Q8N0Z9 540 aa15.73■□□□□ 0.11
PPP4R1-219ENST00000581250 FMNL2Q96PY5 1086 aa15.73■□□□□ 0.11
PPP4R1-219ENST00000581250 PNNQ9H307 717 aaKnown RBP15.73■□□□□ 0.11
PPP4R1-219ENST00000581250 COL15A1P39059 1388 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms