RNA–Protein interactions for RNA: ENST00000581187.1

MIR4253-201, Transcript of microRNA 4253, humanhuman

BASIC

Gene MIR4253, Length 68 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR4253-201ENST00000581187 ATG3Q9NT62 314 aa13.13□□□□□ -0.31
MIR4253-201ENST00000581187 RTCBQ9Y3I0 505 aaKnown RBP13.13□□□□□ -0.31
MIR4253-201ENST00000581187 IGSF1Q8N6C5 1336 aa13.13□□□□□ -0.31
MIR4253-201ENST00000581187 ITGB4P16144 1822 aa13.12□□□□□ -0.31
MIR4253-201ENST00000581187 RC3H1Q5TC82 1133 aaKnown RBP13.12□□□□□ -0.31
MIR4253-201ENST00000581187 NLGN1Q8N2Q7 840 aa13.12□□□□□ -0.31
MIR4253-201ENST00000581187 LINC00116Q8NCU8 138 aa13.12□□□□□ -0.31
MIR4253-201ENST00000581187 RBM42Q9BTD8 480 aaKnown RBP13.12□□□□□ -0.31
MIR4253-201ENST00000581187 C4BP0C0L5 1744 aa13.12□□□□□ -0.31
MIR4253-201ENST00000581187 ADRA2BP18089 450 aa13.11□□□□□ -0.31
MIR4253-201ENST00000581187 MTHFSP49914 203 aa13.11□□□□□ -0.31
MIR4253-201ENST00000581187 ITPK1Q13572 414 aa13.11□□□□□ -0.31
MIR4253-201ENST00000581187 ZNF530Q6P9A1 599 aaPredicted RBP13.11□□□□□ -0.31
MIR4253-201ENST00000581187 TAF1LQ8IZX4 1826 aa13.11□□□□□ -0.31
MIR4253-201ENST00000581187 ANKRD26Q9UPS8 1709 aa13.1□□□□□ -0.31
MIR4253-201ENST00000581187 RFC4P35249 363 aa13.09□□□□□ -0.31
MIR4253-201ENST00000581187 TGFB2P61812 414 aa13.09□□□□□ -0.31
MIR4253-201ENST00000581187 GPBP1L1Q9HC44 474 aaPredicted RBP13.09□□□□□ -0.31
MIR4253-201ENST00000581187 TOGARAM1Q9Y4F4 1720 aa13.08□□□□□ -0.32
MIR4253-201ENST00000581187 RPS6KA4O75676 772 aa13.08□□□□□ -0.32
MIR4253-201ENST00000581187 MMP10P09238 476 aa13.08□□□□□ -0.32
MIR4253-201ENST00000581187 AMIGO3Q86WK7 504 aa13.08□□□□□ -0.32
MIR4253-201ENST00000581187 SULT6B1Q6IMI4 303 aa13.07□□□□□ -0.32
MIR4253-201ENST00000581187 SMIM5Q71RC9 77 aa13.07□□□□□ -0.32
MIR4253-201ENST00000581187 ARHGEF1Q92888 912 aaKnown RBP13.07□□□□□ -0.32
MIR4253-201ENST00000581187 CCDC87Q9NVE4 849 aa13.07□□□□□ -0.32
MIR4253-201ENST00000581187 PARP3Q9Y6F1 533 aa13.07□□□□□ -0.32
MIR4253-201ENST00000581187 CNTNAP4Q9C0A0 1308 aa13.07□□□□□ -0.32
MIR4253-201ENST00000581187 NFATC2IPQ8NCF5 419 aa13.06□□□□□ -0.32
MIR4253-201ENST00000581187 UBR3Q6ZT12 1888 aa13.06□□□□□ -0.32
MIR4253-201ENST00000581187 PTCD1O75127 700 aaKnown RBP13.05□□□□□ -0.32
MIR4253-201ENST00000581187 ATP10DQ9P241 1426 aa13.05□□□□□ -0.32
MIR4253-201ENST00000581187 IL13P35225 146 aa13.04□□□□□ -0.32
MIR4253-201ENST00000581187 AKAP4Q5JQC9 854 aa13.04□□□□□ -0.32
MIR4253-201ENST00000581187 AEBP1Q8IUX7 1158 aa13.03□□□□□ -0.32
MIR4253-201ENST00000581187 SLC4A9Q96Q91 983 aa13.03□□□□□ -0.32
MIR4253-201ENST00000581187 KDRP35968 1356 aa13.03□□□□□ -0.32
MIR4253-201ENST00000581187 GYS1P13807 737 aa13.02□□□□□ -0.33
MIR4253-201ENST00000581187 CRKLP46109 303 aaKnown RBP13.02□□□□□ -0.33
MIR4253-201ENST00000581187 WWC3Q9ULE0 1092 aa13.02□□□□□ -0.33
MIR4253-201ENST00000581187 BCS1LQ9Y276 419 aa13.02□□□□□ -0.33
MIR4253-201ENST00000581187 ZNF831Q5JPB2 1677 aa13.02□□□□□ -0.33
MIR4253-201ENST00000581187 A0A0G2JLW4 131 aa13.01□□□□□ -0.33
MIR4253-201ENST00000581187 AMER1Q5JTC6 1135 aaPredicted RBP13.01□□□□□ -0.33
MIR4253-201ENST00000581187 ZNF526Q8TF50 670 aaPredicted RBP13.01□□□□□ -0.33
MIR4253-201ENST00000581187 KDM6AO15550 1401 aaPredicted RBP13□□□□□ -0.33
MIR4253-201ENST00000581187 DIAPH1O60610 1272 aaKnown RBP13□□□□□ -0.33
MIR4253-201ENST00000581187 ZPR1O75312 459 aa13□□□□□ -0.33
MIR4253-201ENST00000581187 FCHSD2O94868 740 aa13□□□□□ -0.33
MIR4253-201ENST00000581187 ARHGAP27Q6ZUM4 889 aa13□□□□□ -0.33
MIR4253-201ENST00000581187 SLC52A2Q9HAB3 445 aa13□□□□□ -0.33
MIR4253-201ENST00000581187 PIM2Q9P1W9 311 aa12.99□□□□□ -0.33
MIR4253-201ENST00000581187 ADCY9O60503 1353 aa12.98□□□□□ -0.33
MIR4253-201ENST00000581187 RNMTO43148 476 aaKnown RBP12.98□□□□□ -0.33
MIR4253-201ENST00000581187 DPEP1P16444 411 aa12.98□□□□□ -0.33
MIR4253-201ENST00000581187 KIF7Q2M1P5 1343 aa12.97□□□□□ -0.33
MIR4253-201ENST00000581187 USP42Q9H9J4 1324 aaKnown RBP12.97□□□□□ -0.33
MIR4253-201ENST00000581187 HMOX1P09601 288 aa12.97□□□□□ -0.33
MIR4253-201ENST00000581187 HSPA6P17066 643 aa12.97□□□□□ -0.33
MIR4253-201ENST00000581187 VSIG10Q8N0Z9 540 aa12.97□□□□□ -0.33
MIR4253-201ENST00000581187 LGR6Q9HBX8 967 aa12.97□□□□□ -0.33
MIR4253-201ENST00000581187 UTRNP46939 3433 aa12.97□□□□□ -0.33
MIR4253-201ENST00000581187 PXDNLA1KZ92 1463 aa12.97□□□□□ -0.33
MIR4253-201ENST00000581187 C10orf71Q711Q0 1435 aa12.96□□□□□ -0.33
MIR4253-201ENST00000581187 PER1O15534 1290 aaPredicted RBP12.96□□□□□ -0.33
MIR4253-201ENST00000581187 DALRD3Q5D0E6 543 aaKnown RBP12.96□□□□□ -0.33
MIR4253-201ENST00000581187 CC2D1BQ5T0F9 858 aaKnown RBP12.96□□□□□ -0.33
MIR4253-201ENST00000581187 INTS5Q6P9B9 1019 aaKnown RBP12.96□□□□□ -0.33
MIR4253-201ENST00000581187 CICQ96RK0 1608 aaPredicted RBP12.95□□□□□ -0.34
MIR4253-201ENST00000581187 STARD3NLO95772 234 aa12.95□□□□□ -0.34
MIR4253-201ENST00000581187 FKBP8Q14318 412 aa12.95□□□□□ -0.34
MIR4253-201ENST00000581187 MTHFSDQ2M296 383 aaKnown RBP12.95□□□□□ -0.34
MIR4253-201ENST00000581187 DNAJC10Q8IXB1 793 aa12.95□□□□□ -0.34
MIR4253-201ENST00000581187 TTC5Q8N0Z6 440 aa12.95□□□□□ -0.34
MIR4253-201ENST00000581187 TEX13AQ9BXU3 409 aaPredicted RBP12.95□□□□□ -0.34
MIR4253-201ENST00000581187 SRP68Q9UHB9 627 aaKnown RBP12.95□□□□□ -0.34
MIR4253-201ENST00000581187 TOMM70O94826 608 aa12.94□□□□□ -0.34
MIR4253-201ENST00000581187 CYP19A1P11511 503 aaPredicted RBP12.94□□□□□ -0.34
MIR4253-201ENST00000581187 TM4SF1P30408 202 aa12.94□□□□□ -0.34
MIR4253-201ENST00000581187 NPM2Q86SE8 214 aaKnown RBP12.94□□□□□ -0.34
MIR4253-201ENST00000581187 GAS2L2Q8NHY3 880 aa12.94□□□□□ -0.34
MIR4253-201ENST00000581187 NARFQ9UHQ1 456 aa12.94□□□□□ -0.34
MIR4253-201ENST00000581187 C4AP0C0L4 1744 aa12.93□□□□□ -0.34
MIR4253-201ENST00000581187 COL5A3P25940 1745 aaPredicted RBP12.93□□□□□ -0.34
MIR4253-201ENST00000581187 A0A087WZG4 1122 aa12.93□□□□□ -0.34
MIR4253-201ENST00000581187 KIF3CO14782 793 aa12.93□□□□□ -0.34
MIR4253-201ENST00000581187 U2SURPO15042 1029 aaKnown RBP12.93□□□□□ -0.34
MIR4253-201ENST00000581187 KCNA3P22001 575 aa12.93□□□□□ -0.34
MIR4253-201ENST00000581187 TEFQ10587 303 aa12.93□□□□□ -0.34
MIR4253-201ENST00000581187 SLC39A6Q13433 755 aa12.93□□□□□ -0.34
MIR4253-201ENST00000581187 USPL1Q5W0Q7 1092 aa12.93□□□□□ -0.34
MIR4253-201ENST00000581187 C16orf71Q8IYS4 520 aaPredicted RBP12.93□□□□□ -0.34
MIR4253-201ENST00000581187 CFAP53Q96M91 514 aa12.93□□□□□ -0.34
MIR4253-201ENST00000581187 NPC1L1Q9UHC9 1359 aa12.93□□□□□ -0.34
MIR4253-201ENST00000581187 KIF13BQ9NQT8 1826 aa12.92□□□□□ -0.34
MIR4253-201ENST00000581187 SOS1Q07889 1333 aaPredicted RBP12.92□□□□□ -0.34
MIR4253-201ENST00000581187 GNAT3A8MTJ3 354 aa12.92□□□□□ -0.34
MIR4253-201ENST00000581187 POLRMTO00411 1230 aaKnown RBP12.92□□□□□ -0.34
MIR4253-201ENST00000581187 C9orf131Q5VYM1 1079 aa12.92□□□□□ -0.34
MIR4253-201ENST00000581187 SCN11AQ9UI33 1791 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms