RNA–Protein interactions for RNA: ENST00000581057.2

TRAPPC8-208, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-208ENST00000581057 AVPP01185 164 aa12.34□□□□□ -0.43
TRAPPC8-208ENST00000581057 TSEN34Q9BSV6 310 aaKnown RBP12.34□□□□□ -0.43
TRAPPC8-208ENST00000581057 SWI5Q1ZZU3 235 aa12.33□□□□□ -0.44
TRAPPC8-208ENST00000581057 LINC00528Q8N1L1 170 aa12.33□□□□□ -0.44
TRAPPC8-208ENST00000581057 XAGE2Q96GT9 111 aa12.33□□□□□ -0.44
TRAPPC8-208ENST00000581057 ESYT1Q9BSJ8 1104 aa12.33□□□□□ -0.44
TRAPPC8-208ENST00000581057 WASLO00401 505 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC8-208ENST00000581057 PRMT3O60678 531 aa12.32□□□□□ -0.44
TRAPPC8-208ENST00000581057 BMP2P12643 396 aa12.32□□□□□ -0.44
TRAPPC8-208ENST00000581057 BMP1P13497 986 aa12.32□□□□□ -0.44
TRAPPC8-208ENST00000581057 CLN3Q13286 438 aa12.32□□□□□ -0.44
TRAPPC8-208ENST00000581057 TLR1Q15399 786 aa12.32□□□□□ -0.44
TRAPPC8-208ENST00000581057 PRIMPOLQ96LW4 560 aa12.32□□□□□ -0.44
TRAPPC8-208ENST00000581057 INSM2Q96T92 566 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC8-208ENST00000581057 IRX2Q9BZI1 471 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC8-208ENST00000581057 M0R2N6 131 aa12.31□□□□□ -0.44
TRAPPC8-208ENST00000581057 AXIN1O15169 862 aa12.31□□□□□ -0.44
TRAPPC8-208ENST00000581057 LAPTM4AQ15012 233 aa12.31□□□□□ -0.44
TRAPPC8-208ENST00000581057 AEBP1Q8IUX7 1158 aa12.31□□□□□ -0.44
TRAPPC8-208ENST00000581057 POLMQ9NP87 494 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC8-208ENST00000581057 SMTNP53814 917 aa12.3□□□□□ -0.44
TRAPPC8-208ENST00000581057 MRPL14Q6P1L8 145 aaKnown RBP12.3□□□□□ -0.44
TRAPPC8-208ENST00000581057 GAS2L2Q8NHY3 880 aa12.3□□□□□ -0.44
TRAPPC8-208ENST00000581057 CLP1Q92989 425 aaKnown RBP12.3□□□□□ -0.44
TRAPPC8-208ENST00000581057 SLAIN2Q9P270 581 aa12.3□□□□□ -0.44
TRAPPC8-208ENST00000581057 CENPCQ03188 943 aa12.29□□□□□ -0.44
TRAPPC8-208ENST00000581057 CTC1Q2NKJ3 1217 aa12.29□□□□□ -0.44
TRAPPC8-208ENST00000581057 TBCELQ5QJ74 424 aa12.29□□□□□ -0.44
TRAPPC8-208ENST00000581057 PURBQ96QR8 312 aaKnown RBP12.29□□□□□ -0.44
TRAPPC8-208ENST00000581057 A6NJY4 79 aa12.28□□□□□ -0.44
TRAPPC8-208ENST00000581057 ST8SIA5O15466 376 aa12.28□□□□□ -0.44
TRAPPC8-208ENST00000581057 ATP2B4P23634 1241 aa12.28□□□□□ -0.44
TRAPPC8-208ENST00000581057 SCARF1Q14162 830 aa12.28□□□□□ -0.44
TRAPPC8-208ENST00000581057 SLC4A9Q96Q91 983 aa12.28□□□□□ -0.44
TRAPPC8-208ENST00000581057 SLC27A3Q5K4L6 730 aa12.27□□□□□ -0.45
TRAPPC8-208ENST00000581057 SCG3Q8WXD2 468 aaKnown RBP12.27□□□□□ -0.45
TRAPPC8-208ENST00000581057 TSPAN10Q9H1Z9 355 aaPredicted RBP12.27□□□□□ -0.45
TRAPPC8-208ENST00000581057 SPINT1O43278 529 aa12.26□□□□□ -0.45
TRAPPC8-208ENST00000581057 CTSOP43234 321 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC8-208ENST00000581057 SMCPP49901 116 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC8-208ENST00000581057 CHMP7Q8WUX9 453 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC8-208ENST00000581057 ZSCAN10Q96SZ4 725 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC8-208ENST00000581057 GTF2E1P29083 439 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC8-208ENST00000581057 EPHA4P54764 986 aa12.25□□□□□ -0.45
TRAPPC8-208ENST00000581057 TMEM214Q6NUQ4 689 aaKnown RBP12.25□□□□□ -0.45
TRAPPC8-208ENST00000581057 TRIM46Q7Z4K8 759 aa12.25□□□□□ -0.45
TRAPPC8-208ENST00000581057 SCHIP1Q9P0W5 487 aaPredicted RBP12.25□□□□□ -0.45
TRAPPC8-208ENST00000581057 HRH3Q9Y5N1 445 aa12.25□□□□□ -0.45
TRAPPC8-208ENST00000581057 B4GALNT3Q6L9W6 998 aa12.24□□□□□ -0.45
TRAPPC8-208ENST00000581057 SLC9A9Q8IVB4 645 aa12.24□□□□□ -0.45
TRAPPC8-208ENST00000581057 USP3Q9Y6I4 520 aa12.24□□□□□ -0.45
TRAPPC8-208ENST00000581057 ATAD2Q6PL18 1390 aa12.23□□□□□ -0.45
TRAPPC8-208ENST00000581057 BRD1O95696 1058 aa12.23□□□□□ -0.45
TRAPPC8-208ENST00000581057 MTFR1Q15390 333 aa12.23□□□□□ -0.45
TRAPPC8-208ENST00000581057 FHDC1Q9C0D6 1143 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC8-208ENST00000581057 AAASQ9NRG9 546 aa12.23□□□□□ -0.45
TRAPPC8-208ENST00000581057 PPP1R12BO60237 982 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC8-208ENST00000581057 SSFA2P28290 1259 aa12.22□□□□□ -0.45
TRAPPC8-208ENST00000581057 SCNN1AP37088 669 aa12.22□□□□□ -0.45
TRAPPC8-208ENST00000581057 FOXD4L5Q5VV16 416 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC8-208ENST00000581057 CRIPAKQ8N1N5 446 aa12.22□□□□□ -0.45
TRAPPC8-208ENST00000581057 ZFP42Q96MM3 310 aa12.22□□□□□ -0.45
TRAPPC8-208ENST00000581057 MKNK1Q9BUB5 465 aa12.22□□□□□ -0.45
TRAPPC8-208ENST00000581057 CXXC1Q9P0U4 656 aaPredicted RBP12.22□□□□□ -0.45
TRAPPC8-208ENST00000581057 DACH1Q9UI36 760 aa12.22□□□□□ -0.45
TRAPPC8-208ENST00000581057 FIGNL2A6NMB9 653 aa12.21□□□□□ -0.45
TRAPPC8-208ENST00000581057 CDK2AP1O14519 115 aa12.21□□□□□ -0.45
TRAPPC8-208ENST00000581057 WEE1P30291 646 aa12.21□□□□□ -0.45
TRAPPC8-208ENST00000581057 RNF144AP50876 292 aaPredicted RBP12.21□□□□□ -0.45
TRAPPC8-208ENST00000581057 OCLNQ16625 522 aa12.21□□□□□ -0.45
TRAPPC8-208ENST00000581057 KCTD17Q8N5Z5 321 aa12.21□□□□□ -0.45
TRAPPC8-208ENST00000581057 CABP1Q9NZU7 370 aa12.21□□□□□ -0.45
TRAPPC8-208ENST00000581057 TTLL8A6PVC2 850 aa12.2□□□□□ -0.46
TRAPPC8-208ENST00000581057 FOXK2Q01167 660 aa12.2□□□□□ -0.46
TRAPPC8-208ENST00000581057 PHLDB3Q6NSJ2 640 aa12.2□□□□□ -0.46
TRAPPC8-208ENST00000581057 PRICKLE2Q7Z3G6 844 aa12.2□□□□□ -0.46
TRAPPC8-208ENST00000581057 ATP13A2Q9NQ11 1180 aa12.2□□□□□ -0.46
TRAPPC8-208ENST00000581057 C21orf2O43822 256 aa12.19□□□□□ -0.46
TRAPPC8-208ENST00000581057 IGFBP4P22692 258 aa12.19□□□□□ -0.46
TRAPPC8-208ENST00000581057 GPC1P35052 558 aa12.19□□□□□ -0.46
TRAPPC8-208ENST00000581057 Q6ZNB5 142 aa12.19□□□□□ -0.46
TRAPPC8-208ENST00000581057 NBPF15Q8N660 670 aa12.19□□□□□ -0.46
TRAPPC8-208ENST00000581057 GRIP2Q9C0E4 1043 aa12.19□□□□□ -0.46
TRAPPC8-208ENST00000581057 CHMP3Q9Y3E7 222 aa12.19□□□□□ -0.46
TRAPPC8-208ENST00000581057 PARP3Q9Y6F1 533 aa12.19□□□□□ -0.46
TRAPPC8-208ENST00000581057 FKBP5Q13451 457 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC8-208ENST00000581057 GNASQ5JWF2 1037 aa12.18□□□□□ -0.46
TRAPPC8-208ENST00000581057 PPARGC1BQ86YN6 1023 aaKnown RBP12.18□□□□□ -0.46
TRAPPC8-208ENST00000581057 RNF217Q8TC41 542 aa12.18□□□□□ -0.46
TRAPPC8-208ENST00000581057 VTI1AQ96AJ9 217 aa12.18□□□□□ -0.46
TRAPPC8-208ENST00000581057 ZNF232Q9UNY5 417 aa12.18□□□□□ -0.46
TRAPPC8-208ENST00000581057 IQSEC3Q9UPP2 1182 aaPredicted RBP12.18□□□□□ -0.46
TRAPPC8-208ENST00000581057 PHKA2P46019 1235 aa12.17□□□□□ -0.46
TRAPPC8-208ENST00000581057 PSMA6P60900 246 aaKnown RBP12.16□□□□□ -0.46
TRAPPC8-208ENST00000581057 POU4F2Q12837 409 aa12.16□□□□□ -0.46
TRAPPC8-208ENST00000581057 TRIM26Q12899 539 aaPredicted RBP12.16□□□□□ -0.46
TRAPPC8-208ENST00000581057 LYSMD3Q7Z3D4 306 aa12.16□□□□□ -0.46
TRAPPC8-208ENST00000581057 RHBDD1Q8TEB9 315 aa12.16□□□□□ -0.46
TRAPPC8-208ENST00000581057 NIFKQ9BYG3 293 aaKnown RBP12.16□□□□□ -0.46
TRAPPC8-208ENST00000581057 SOS2Q07890 1332 aaPredicted RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms