RNA–Protein interactions for RNA: ENST00000581047.2

RN7SL557P-201, Transcript of RNA, 7SL, cytoplasmic 557, pseudogene, humanhuman

BASIC

Gene RN7SL557P, Length 286 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL557P-201ENST00000581047 SLC52A2Q9HAB3 445 aa12.44□□□□□ -0.42
RN7SL557P-201ENST00000581047 NUP188Q5SRE5 1749 aa12.44□□□□□ -0.42
RN7SL557P-201ENST00000581047 CABP4P57796 275 aa12.43□□□□□ -0.42
RN7SL557P-201ENST00000581047 TEFQ10587 303 aa12.43□□□□□ -0.42
RN7SL557P-201ENST00000581047 SF3B2Q13435 895 aaKnown RBP12.43□□□□□ -0.42
RN7SL557P-201ENST00000581047 CCDC27Q2M243 656 aa12.43□□□□□ -0.42
RN7SL557P-201ENST00000581047 TRIM35Q9UPQ4 493 aa12.43□□□□□ -0.42
RN7SL557P-201ENST00000581047 RRP7AQ9Y3A4 280 aaKnown RBP12.43□□□□□ -0.42
RN7SL557P-201ENST00000581047 COL5A3P25940 1745 aaPredicted RBP12.42□□□□□ -0.42
RN7SL557P-201ENST00000581047 C5P01031 1676 aa12.42□□□□□ -0.42
RN7SL557P-201ENST00000581047 BAG6P46379 1132 aa12.42□□□□□ -0.42
RN7SL557P-201ENST00000581047 NEUROD2Q15784 382 aa12.42□□□□□ -0.42
RN7SL557P-201ENST00000581047 MCM10Q7L590 875 aa12.42□□□□□ -0.42
RN7SL557P-201ENST00000581047 PTF1AQ7RTS3 328 aa12.42□□□□□ -0.42
RN7SL557P-201ENST00000581047 PIGBQ92521 554 aa12.42□□□□□ -0.42
RN7SL557P-201ENST00000581047 LAMB4A4D0S4 1761 aa12.42□□□□□ -0.42
RN7SL557P-201ENST00000581047 TJP1Q07157 1748 aa12.42□□□□□ -0.42
RN7SL557P-201ENST00000581047 PLSCR1O15162 318 aa12.41□□□□□ -0.42
RN7SL557P-201ENST00000581047 APBA3O96018 575 aa12.41□□□□□ -0.42
RN7SL557P-201ENST00000581047 DCTN1Q14203 1278 aa12.41□□□□□ -0.42
RN7SL557P-201ENST00000581047 NFATC2IPQ8NCF5 419 aa12.41□□□□□ -0.42
RN7SL557P-201ENST00000581047 KCPQ6ZWJ8 1503 aa12.41□□□□□ -0.42
RN7SL557P-201ENST00000581047 EP400Q96L91 3159 aa12.4□□□□□ -0.42
RN7SL557P-201ENST00000581047 SMARCC1Q92922 1105 aaPredicted RBP12.4□□□□□ -0.42
RN7SL557P-201ENST00000581047 PALLDQ8WX93 1383 aa12.4□□□□□ -0.42
RN7SL557P-201ENST00000581047 CALD1Q05682 793 aaKnown RBP12.39□□□□□ -0.43
RN7SL557P-201ENST00000581047 THUMPD2Q9BTF0 503 aaKnown RBP12.39□□□□□ -0.43
RN7SL557P-201ENST00000581047 ATG3Q9NT62 314 aa12.39□□□□□ -0.43
RN7SL557P-201ENST00000581047 BABAM1Q9NWV8 329 aa12.39□□□□□ -0.43
RN7SL557P-201ENST00000581047 QSER1Q2KHR3 1735 aa12.39□□□□□ -0.43
RN7SL557P-201ENST00000581047 TAF7Q15545 349 aaPredicted RBP12.38□□□□□ -0.43
RN7SL557P-201ENST00000581047 WWC1Q8IX03 1113 aa12.38□□□□□ -0.43
RN7SL557P-201ENST00000581047 ASAP1Q9ULH1 1129 aa12.38□□□□□ -0.43
RN7SL557P-201ENST00000581047 TUBGCP6Q96RT7 1819 aa12.37□□□□□ -0.43
RN7SL557P-201ENST00000581047 BTBD11A6QL63 1104 aa12.37□□□□□ -0.43
RN7SL557P-201ENST00000581047 CAMKK2Q96RR4 588 aa12.37□□□□□ -0.43
RN7SL557P-201ENST00000581047 C4BP0C0L5 1744 aa12.37□□□□□ -0.43
RN7SL557P-201ENST00000581047 IL16Q14005 1332 aa12.37□□□□□ -0.43
RN7SL557P-201ENST00000581047 ZNF521Q96K83 1311 aa12.37□□□□□ -0.43
RN7SL557P-201ENST00000581047 EN1Q05925 392 aaPredicted RBP12.36□□□□□ -0.43
RN7SL557P-201ENST00000581047 SLC27A3Q5K4L6 730 aa12.36□□□□□ -0.43
RN7SL557P-201ENST00000581047 ZNF790Q6PG37 636 aa12.36□□□□□ -0.43
RN7SL557P-201ENST00000581047 DEFB132Q7Z7B7 95 aa12.36□□□□□ -0.43
RN7SL557P-201ENST00000581047 TTC5Q8N0Z6 440 aa12.36□□□□□ -0.43
RN7SL557P-201ENST00000581047 MYH14Q7Z406 1995 aaKnown RBP12.36□□□□□ -0.43
RN7SL557P-201ENST00000581047 UBR3Q6ZT12 1888 aa12.36□□□□□ -0.43
RN7SL557P-201ENST00000581047 HMGB2P26583 209 aaKnown RBP12.35□□□□□ -0.43
RN7SL557P-201ENST00000581047 SLC39A6Q13433 755 aa12.35□□□□□ -0.43
RN7SL557P-201ENST00000581047 TXNRD1Q16881 649 aa12.35□□□□□ -0.43
RN7SL557P-201ENST00000581047 WDR63Q8IWG1 891 aa12.35□□□□□ -0.43
RN7SL557P-201ENST00000581047 CFAP44Q96MT7 982 aa12.35□□□□□ -0.43
RN7SL557P-201ENST00000581047 IFT57Q9NWB7 429 aa12.35□□□□□ -0.43
RN7SL557P-201ENST00000581047 SENP3-EIF4A1A0A087X0R7 540 aa12.34□□□□□ -0.43
RN7SL557P-201ENST00000581047 LOC102724428A0A0B4J2F2 783 aa12.34□□□□□ -0.43
RN7SL557P-201ENST00000581047 CHL1O00533 1208 aa12.34□□□□□ -0.43
RN7SL557P-201ENST00000581047 ZNF853P0CG23 659 aa12.34□□□□□ -0.43
RN7SL557P-201ENST00000581047 SIK1P57059 783 aa12.34□□□□□ -0.43
RN7SL557P-201ENST00000581047 GNAI1P63096 354 aa12.34□□□□□ -0.43
RN7SL557P-201ENST00000581047 EZH2Q15910 746 aaKnown RBP12.34□□□□□ -0.43
RN7SL557P-201ENST00000581047 TSPYL4Q9UJ04 414 aa12.34□□□□□ -0.43
RN7SL557P-201ENST00000581047 CACNA1FO60840 1977 aa12.34□□□□□ -0.43
RN7SL557P-201ENST00000581047 HEG1Q9ULI3 1381 aa12.33□□□□□ -0.44
RN7SL557P-201ENST00000581047 VSIG10Q8N0Z9 540 aa12.33□□□□□ -0.44
RN7SL557P-201ENST00000581047 PROM2Q8N271 834 aa12.33□□□□□ -0.44
RN7SL557P-201ENST00000581047 FMNL2Q96PY5 1086 aa12.33□□□□□ -0.44
RN7SL557P-201ENST00000581047 CCNL1Q9UK58 526 aaPredicted RBP12.33□□□□□ -0.44
RN7SL557P-201ENST00000581047 SALL2Q9Y467 1007 aaPredicted RBP12.33□□□□□ -0.44
RN7SL557P-201ENST00000581047 KCNQ3O43525 872 aa12.32□□□□□ -0.44
RN7SL557P-201ENST00000581047 HNRNPUQ00839 825 aaKnown RBP eCLIP12.32□□□□□ -0.44
RN7SL557P-201ENST00000581047 ZNF496Q96IT1 587 aaPredicted RBP12.32□□□□□ -0.44
RN7SL557P-201ENST00000581047 RBM42Q9BTD8 480 aaKnown RBP12.32□□□□□ -0.44
RN7SL557P-201ENST00000581047 PTCD1O75127 700 aaKnown RBP12.31□□□□□ -0.44
RN7SL557P-201ENST00000581047 ATP6V1AP38606 617 aa12.31□□□□□ -0.44
RN7SL557P-201ENST00000581047 EIF4A1P60842 406 aaKnown RBP12.31□□□□□ -0.44
RN7SL557P-201ENST00000581047 SLC4A9Q96Q91 983 aa12.31□□□□□ -0.44
RN7SL557P-201ENST00000581047 MBIPQ9NS73 344 aa12.31□□□□□ -0.44
RN7SL557P-201ENST00000581047 LRRC4BQ9NT99 713 aa12.31□□□□□ -0.44
RN7SL557P-201ENST00000581047 MIS18AQ9NYP9 233 aa12.31□□□□□ -0.44
RN7SL557P-201ENST00000581047 LAS1LQ9Y4W2 734 aaKnown RBP12.31□□□□□ -0.44
RN7SL557P-201ENST00000581047 ZBED9Q6R2W3 1325 aa12.31□□□□□ -0.44
RN7SL557P-201ENST00000581047 C4AP0C0L4 1744 aa12.31□□□□□ -0.44
RN7SL557P-201ENST00000581047 ITPK1Q13572 414 aa12.3□□□□□ -0.44
RN7SL557P-201ENST00000581047 TEX13AQ9BXU3 409 aaPredicted RBP12.3□□□□□ -0.44
RN7SL557P-201ENST00000581047 CNTNAP4Q9C0A0 1308 aa12.3□□□□□ -0.44
RN7SL557P-201ENST00000581047 SNRPA1P09661 255 aaKnown RBP12.29□□□□□ -0.44
RN7SL557P-201ENST00000581047 GOLGA2Q08379 1002 aa12.29□□□□□ -0.44
RN7SL557P-201ENST00000581047 MYH16Q9H6N6 1097 aa12.29□□□□□ -0.44
RN7SL557P-201ENST00000581047 FANCIQ9NVI1 1328 aa12.29□□□□□ -0.44
RN7SL557P-201ENST00000581047 CASZ1Q86V15 1759 aa12.28□□□□□ -0.44
RN7SL557P-201ENST00000581047 E9PSI1 815 aa12.28□□□□□ -0.44
RN7SL557P-201ENST00000581047 GIGYF1O75420 1035 aaPredicted RBP12.28□□□□□ -0.44
RN7SL557P-201ENST00000581047 HOXB7P09629 217 aa12.28□□□□□ -0.44
RN7SL557P-201ENST00000581047 KCNQ4P56696 695 aa12.28□□□□□ -0.44
RN7SL557P-201ENST00000581047 DNAJC10Q8IXB1 793 aa12.28□□□□□ -0.44
RN7SL557P-201ENST00000581047 LINC00116Q8NCU8 138 aa12.28□□□□□ -0.44
RN7SL557P-201ENST00000581047 SOS1Q07889 1333 aaPredicted RBP12.28□□□□□ -0.44
RN7SL557P-201ENST00000581047 TSR2Q969E8 191 aaKnown RBP12.27□□□□□ -0.45
RN7SL557P-201ENST00000581047 SPINK5Q9NQ38 1064 aaPredicted RBP12.27□□□□□ -0.45
RN7SL557P-201ENST00000581047 BCORQ6W2J9 1755 aa12.27□□□□□ -0.45
RN7SL557P-201ENST00000581047 STARD3NLO95772 234 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms