RNA–Protein interactions for RNA: ENST00000580799.2

GGA3-210, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-210ENST00000580799 KDRP35968 1356 aa14.16□□□□□ -0.14
GGA3-210ENST00000580799 KIF13BQ9NQT8 1826 aa14.15□□□□□ -0.14
GGA3-210ENST00000580799 ERVV-2B6SEH9 535 aa14.15□□□□□ -0.14
GGA3-210ENST00000580799 HSP90AB1P08238 724 aaKnown RBP14.15□□□□□ -0.14
GGA3-210ENST00000580799 DCAF5Q96JK2 942 aa14.15□□□□□ -0.14
GGA3-210ENST00000580799 COL5A3P25940 1745 aaPredicted RBP14.15□□□□□ -0.14
GGA3-210ENST00000580799 CICQ96RK0 1608 aaPredicted RBP14.15□□□□□ -0.14
GGA3-210ENST00000580799 TNNT2P45379 298 aaPredicted RBP14.14□□□□□ -0.15
GGA3-210ENST00000580799 SMIM5Q71RC9 77 aa14.14□□□□□ -0.15
GGA3-210ENST00000580799 RC3H1Q5TC82 1133 aaKnown RBP14.13□□□□□ -0.15
GGA3-210ENST00000580799 NLGN1Q8N2Q7 840 aa14.13□□□□□ -0.15
GGA3-210ENST00000580799 POLR3GLQ9BT43 218 aa14.13□□□□□ -0.15
GGA3-210ENST00000580799 RTCBQ9Y3I0 505 aaKnown RBP14.13□□□□□ -0.15
GGA3-210ENST00000580799 MMP10P09238 476 aa14.12□□□□□ -0.15
GGA3-210ENST00000580799 ADRA2BP18089 450 aa14.12□□□□□ -0.15
GGA3-210ENST00000580799 EIF4G2P78344 907 aaKnown RBP eCLIP14.12□□□□□ -0.15
GGA3-210ENST00000580799 AMOTQ4VCS5 1084 aa14.12□□□□□ -0.15
GGA3-210ENST00000580799 PLEKHO1Q53GL0 409 aaPredicted RBP14.12□□□□□ -0.15
GGA3-210ENST00000580799 TRAPPC3LQ5T215 181 aa14.12□□□□□ -0.15
GGA3-210ENST00000580799 KIAA1551Q9HCM1 1747 aa14.12□□□□□ -0.15
GGA3-210ENST00000580799 TGFB2P61812 414 aa14.11□□□□□ -0.15
GGA3-210ENST00000580799 PXDNLA1KZ92 1463 aa14.11□□□□□ -0.15
GGA3-210ENST00000580799 CNTNAP4Q9C0A0 1308 aa14.11□□□□□ -0.15
GGA3-210ENST00000580799 C4AP0C0L4 1744 aa14.1□□□□□ -0.15
GGA3-210ENST00000580799 KDM6AO15550 1401 aaPredicted RBP14.1□□□□□ -0.15
GGA3-210ENST00000580799 RBM42Q9BTD8 480 aaKnown RBP14.1□□□□□ -0.15
GGA3-210ENST00000580799 PANK3Q9H999 370 aa14.1□□□□□ -0.15
GGA3-210ENST00000580799 C10orf71Q711Q0 1435 aa14.09□□□□□ -0.15
GGA3-210ENST00000580799 RPS6KA4O75676 772 aa14.09□□□□□ -0.15
GGA3-210ENST00000580799 CABP4P57796 275 aa14.09□□□□□ -0.15
GGA3-210ENST00000580799 ZNF530Q6P9A1 599 aaPredicted RBP14.09□□□□□ -0.15
GGA3-210ENST00000580799 SLC4A9Q96Q91 983 aa14.09□□□□□ -0.15
GGA3-210ENST00000580799 N4BP2Q86UW6 1770 aaPredicted RBP14.09□□□□□ -0.15
GGA3-210ENST00000580799 RFC4P35249 363 aa14.08□□□□□ -0.16
GGA3-210ENST00000580799 C1orf141Q5JVX7 400 aa14.08□□□□□ -0.16
GGA3-210ENST00000580799 ZNF526Q8TF50 670 aaPredicted RBP14.08□□□□□ -0.16
GGA3-210ENST00000580799 ARHGEF1Q92888 912 aaKnown RBP14.08□□□□□ -0.16
GGA3-210ENST00000580799 WWC3Q9ULE0 1092 aa14.08□□□□□ -0.16
GGA3-210ENST00000580799 HSPA5P11021 654 aaKnown RBP14.07□□□□□ -0.16
GGA3-210ENST00000580799 GYS1P13807 737 aa14.07□□□□□ -0.16
GGA3-210ENST00000580799 HSPA6P17066 643 aa14.07□□□□□ -0.16
GGA3-210ENST00000580799 MTHFSP49914 203 aa14.07□□□□□ -0.16
GGA3-210ENST00000580799 MORC1Q86VD1 984 aa14.07□□□□□ -0.16
GGA3-210ENST00000580799 PCGF6Q9BYE7 350 aa14.07□□□□□ -0.16
GGA3-210ENST00000580799 CCDC87Q9NVE4 849 aa14.07□□□□□ -0.16
GGA3-210ENST00000580799 BRCA1P38398 1863 aaKnown RBP14.06□□□□□ -0.16
GGA3-210ENST00000580799 PARP3Q9Y6F1 533 aa14.06□□□□□ -0.16
GGA3-210ENST00000580799 TJP1Q07157 1748 aa14.06□□□□□ -0.16
GGA3-210ENST00000580799 SCN11AQ9UI33 1791 aa14.06□□□□□ -0.16
GGA3-210ENST00000580799 MYH14Q7Z406 1995 aaKnown RBP14.05□□□□□ -0.16
GGA3-210ENST00000580799 CEP350Q5VT06 3117 aa14.05□□□□□ -0.16
GGA3-210ENST00000580799 AEBP1Q8IUX7 1158 aa14.05□□□□□ -0.16
GGA3-210ENST00000580799 BCS1LQ9Y276 419 aa14.05□□□□□ -0.16
GGA3-210ENST00000580799 A0A0G2JLW4 131 aa14.04□□□□□ -0.16
GGA3-210ENST00000580799 PTCD1O75127 700 aaKnown RBP14.04□□□□□ -0.16
GGA3-210ENST00000580799 NFATC2IPQ8NCF5 419 aa14.04□□□□□ -0.16
GGA3-210ENST00000580799 KNSTRNQ9Y448 316 aa14.04□□□□□ -0.16
GGA3-210ENST00000580799 ARFGEF1Q9Y6D6 1849 aa14.04□□□□□ -0.16
GGA3-210ENST00000580799 KIF3CO14782 793 aa14.03□□□□□ -0.16
GGA3-210ENST00000580799 CRKLP46109 303 aaKnown RBP14.03□□□□□ -0.16
GGA3-210ENST00000580799 SULT6B1Q6IMI4 303 aa14.03□□□□□ -0.16
GGA3-210ENST00000580799 USP42Q9H9J4 1324 aaKnown RBP14.02□□□□□ -0.17
GGA3-210ENST00000580799 FCHSD2O94868 740 aa14.02□□□□□ -0.17
GGA3-210ENST00000580799 DPEP1P16444 411 aa14.02□□□□□ -0.17
GGA3-210ENST00000580799 ADAMTS7Q9UKP4 1686 aa14.01□□□□□ -0.17
GGA3-210ENST00000580799 IL13P35225 146 aa14.01□□□□□ -0.17
GGA3-210ENST00000580799 IFFO2Q5TF58 517 aa14.01□□□□□ -0.17
GGA3-210ENST00000580799 ARHGAP27Q6ZUM4 889 aa14.01□□□□□ -0.17
GGA3-210ENST00000580799 MRC1P22897 1456 aa14□□□□□ -0.17
GGA3-210ENST00000580799 TOMM70O94826 608 aa14□□□□□ -0.17
GGA3-210ENST00000580799 AKAP4Q5JQC9 854 aa14□□□□□ -0.17
GGA3-210ENST00000580799 PIM2Q9P1W9 311 aa14□□□□□ -0.17
GGA3-210ENST00000580799 KCNA3P22001 575 aa13.99□□□□□ -0.17
GGA3-210ENST00000580799 VIRMAQ69YN4 1812 aaKnown RBP13.99□□□□□ -0.17
GGA3-210ENST00000580799 APLP1P51693 650 aa13.98□□□□□ -0.17
GGA3-210ENST00000580799 FKBP8Q14318 412 aa13.98□□□□□ -0.17
GGA3-210ENST00000580799 DALRD3Q5D0E6 543 aaKnown RBP13.98□□□□□ -0.17
GGA3-210ENST00000580799 AMER1Q5JTC6 1135 aaPredicted RBP13.98□□□□□ -0.17
GGA3-210ENST00000580799 INTS5Q6P9B9 1019 aaKnown RBP13.98□□□□□ -0.17
GGA3-210ENST00000580799 SLC52A2Q9HAB3 445 aa13.98□□□□□ -0.17
GGA3-210ENST00000580799 SRP68Q9UHB9 627 aaKnown RBP13.98□□□□□ -0.17
GGA3-210ENST00000580799 ZPR1O75312 459 aa13.97□□□□□ -0.17
GGA3-210ENST00000580799 DDR1Q08345 913 aa13.97□□□□□ -0.17
GGA3-210ENST00000580799 TM4SF1P30408 202 aa13.96□□□□□ -0.17
GGA3-210ENST00000580799 CCER1Q8TC90 406 aaPredicted RBP13.96□□□□□ -0.17
GGA3-210ENST00000580799 KCPQ6ZWJ8 1503 aa13.95□□□□□ -0.18
GGA3-210ENST00000580799 SOS1Q07889 1333 aaPredicted RBP13.95□□□□□ -0.18
GGA3-210ENST00000580799 POLRMTO00411 1230 aaKnown RBP13.95□□□□□ -0.18
GGA3-210ENST00000580799 CYP19A1P11511 503 aaPredicted RBP13.95□□□□□ -0.18
GGA3-210ENST00000580799 C9orf131Q5VYM1 1079 aa13.95□□□□□ -0.18
GGA3-210ENST00000580799 DNAJC10Q8IXB1 793 aa13.95□□□□□ -0.18
GGA3-210ENST00000580799 UBR2Q8IWV8 1755 aa13.95□□□□□ -0.18
GGA3-210ENST00000580799 NRXN2Q9P2S2 1712 aa13.95□□□□□ -0.18
GGA3-210ENST00000580799 KDM2BQ8NHM5 1336 aa13.94□□□□□ -0.18
GGA3-210ENST00000580799 DLEC1Q9Y238 1755 aa13.94□□□□□ -0.18
GGA3-210ENST00000580799 RNMTO43148 476 aaKnown RBP13.94□□□□□ -0.18
GGA3-210ENST00000580799 VSIG10Q8N0Z9 540 aa13.94□□□□□ -0.18
GGA3-210ENST00000580799 LGR6Q9HBX8 967 aa13.94□□□□□ -0.18
GGA3-210ENST00000580799 NMRK2Q9NPI5 230 aa13.94□□□□□ -0.18
GGA3-210ENST00000580799 TNRC6CQ9HCJ0 1690 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms