RNA–Protein interactions for RNA: ENST00000580741.5

LINC00271-207, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 596 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-207ENST00000580741 ATP6V1AP38606 617 aa36.01■■■■□ 3.36
LINC00271-207ENST00000580741 COL23A1Q86Y22 540 aaPredicted RBP36.01■■■■□ 3.36
LINC00271-207ENST00000580741 LGR6Q9HBX8 967 aa36.01■■■■□ 3.36
LINC00271-207ENST00000580741 AK7Q96M32 723 aa36■■■■□ 3.35
LINC00271-207ENST00000580741 RBM42Q9BTD8 480 aaKnown RBP36■■■■□ 3.35
LINC00271-207ENST00000580741 SLC16A10Q8TF71 515 aa35.99■■■■□ 3.35
LINC00271-207ENST00000580741 SCN11AQ9UI33 1791 aa35.98■■■■□ 3.35
LINC00271-207ENST00000580741 SMIM5Q71RC9 77 aa35.98■■■■□ 3.35
LINC00271-207ENST00000580741 AMIGO3Q86WK7 504 aa35.98■■■■□ 3.35
LINC00271-207ENST00000580741 SLC4A9Q96Q91 983 aa35.98■■■■□ 3.35
LINC00271-207ENST00000580741 NUDCQ9Y266 331 aa35.98■■■■□ 3.35
LINC00271-207ENST00000580741 RNMTO43148 476 aaKnown RBP35.97■■■■□ 3.35
LINC00271-207ENST00000580741 HMGB2P26583 209 aaKnown RBP35.96■■■■□ 3.35
LINC00271-207ENST00000580741 U2AF1L5P0DN76 240 aaPredicted RBP35.95■■■■□ 3.35
LINC00271-207ENST00000580741 PRKAR2BP31323 418 aa35.95■■■■□ 3.35
LINC00271-207ENST00000580741 U2AF1Q01081 240 aaKnown RBP eCLIP35.95■■■■□ 3.35
LINC00271-207ENST00000580741 RSPH6AQ9H0K4 717 aa35.95■■■■□ 3.35
LINC00271-207ENST00000580741 PHF14O94880 888 aa35.93■■■■□ 3.34
LINC00271-207ENST00000580741 SLC52A2Q9HAB3 445 aa35.93■■■■□ 3.34
LINC00271-207ENST00000580741 PTCD1O75127 700 aaKnown RBP35.92■■■■□ 3.34
LINC00271-207ENST00000580741 ARXQ96QS3 562 aa35.92■■■■□ 3.34
LINC00271-207ENST00000580741 MSL1Q68DK7 614 aa35.91■■■■□ 3.34
LINC00271-207ENST00000580741 GAS2L2Q8NHY3 880 aa35.91■■■■□ 3.34
LINC00271-207ENST00000580741 PHACTR3Q96KR7 559 aa35.91■■■■□ 3.34
LINC00271-207ENST00000580741 FHDC1Q9C0D6 1143 aaPredicted RBP35.9■■■■□ 3.34
LINC00271-207ENST00000580741 MRC1P22897 1456 aa35.9■■■■□ 3.34
LINC00271-207ENST00000580741 FLAD1Q8NFF5 587 aa35.89■■■■□ 3.34
LINC00271-207ENST00000580741 MAP3K5Q99683 1374 aa35.89■■■■□ 3.34
LINC00271-207ENST00000580741 UBR3Q6ZT12 1888 aa35.88■■■■□ 3.33
LINC00271-207ENST00000580741 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP35.88■■■■□ 3.33
LINC00271-207ENST00000580741 GNPATO15228 680 aa35.88■■■■□ 3.33
LINC00271-207ENST00000580741 POLD1P28340 1107 aa35.88■■■■□ 3.33
LINC00271-207ENST00000580741 ADAMTS7Q9UKP4 1686 aa35.87■■■■□ 3.33
LINC00271-207ENST00000580741 VIRMAQ69YN4 1812 aaKnown RBP35.86■■■■□ 3.33
LINC00271-207ENST00000580741 ZEB1P37275 1124 aaPredicted RBP35.86■■■■□ 3.33
LINC00271-207ENST00000580741 SLC39A6Q13433 755 aa35.85■■■■□ 3.33
LINC00271-207ENST00000580741 COL24A1Q17RW2 1714 aa35.84■■■■□ 3.33
LINC00271-207ENST00000580741 GNAT3A8MTJ3 354 aa35.84■■■■□ 3.33
LINC00271-207ENST00000580741 SSFA2P28290 1259 aa35.83■■■■□ 3.33
LINC00271-207ENST00000580741 SYT17Q9BSW7 474 aa35.83■■■■□ 3.33
LINC00271-207ENST00000580741 ZNF831Q5JPB2 1677 aa35.83■■■■□ 3.33
LINC00271-207ENST00000580741 IL17REQ8NFR9 667 aa35.82■■■■□ 3.32
LINC00271-207ENST00000580741 FCHSD2O94868 740 aa35.81■■■■□ 3.32
LINC00271-207ENST00000580741 RALBP1Q15311 655 aa35.81■■■■□ 3.32
LINC00271-207ENST00000580741 KLHL34Q8N239 644 aa35.81■■■■□ 3.32
LINC00271-207ENST00000580741 COL5A3P25940 1745 aaPredicted RBP35.8■■■■□ 3.32
LINC00271-207ENST00000580741 CNTNAP4Q9C0A0 1308 aa35.78■■■■□ 3.32
LINC00271-207ENST00000580741 TEFQ10587 303 aa35.76■■■■□ 3.32
LINC00271-207ENST00000580741 RC3H1Q5TC82 1133 aaKnown RBP35.76■■■■□ 3.32
LINC00271-207ENST00000580741 RTCBQ9Y3I0 505 aaKnown RBP35.76■■■■□ 3.32
LINC00271-207ENST00000580741 TJP1Q07157 1748 aa35.76■■■■□ 3.31
LINC00271-207ENST00000580741 KCPQ6ZWJ8 1503 aa35.74■■■■□ 3.31
LINC00271-207ENST00000580741 DNAJC10Q8IXB1 793 aa35.74■■■■□ 3.31
LINC00271-207ENST00000580741 CRKLP46109 303 aaKnown RBP35.73■■■■□ 3.31
LINC00271-207ENST00000580741 MYH14Q7Z406 1995 aaKnown RBP35.73■■■■□ 3.31
LINC00271-207ENST00000580741 RPS6KA4O75676 772 aa35.71■■■■□ 3.31
LINC00271-207ENST00000580741 TRAPPC3LQ5T215 181 aa35.71■■■■□ 3.31
LINC00271-207ENST00000580741 CEMIPQ8WUJ3 1361 aa35.71■■■■□ 3.31
LINC00271-207ENST00000580741 MYBBP1AQ9BQG0 1328 aaKnown RBP35.7■■■■□ 3.31
LINC00271-207ENST00000580741 CICQ96RK0 1608 aaPredicted RBP35.69■■■■□ 3.3
LINC00271-207ENST00000580741 MCM10Q7L590 875 aa35.68■■■■□ 3.3
LINC00271-207ENST00000580741 TTC5Q8N0Z6 440 aa35.68■■■■□ 3.3
LINC00271-207ENST00000580741 ARHGEF1Q92888 912 aaKnown RBP35.68■■■■□ 3.3
LINC00271-207ENST00000580741 DCAF8L1A6NGE4 600 aa35.67■■■■□ 3.3
LINC00271-207ENST00000580741 RTF1Q92541 710 aaKnown RBP35.67■■■■□ 3.3
LINC00271-207ENST00000580741 SIPA1L3O60292 1781 aaPredicted RBP35.66■■■■□ 3.3
LINC00271-207ENST00000580741 DCTN1Q14203 1278 aa35.66■■■■□ 3.3
LINC00271-207ENST00000580741 INTS5Q6P9B9 1019 aaKnown RBP35.66■■■■□ 3.3
LINC00271-207ENST00000580741 ADRA2BP18089 450 aa35.65■■■■□ 3.3
LINC00271-207ENST00000580741 NLGN2Q8NFZ4 835 aa35.65■■■■□ 3.3
LINC00271-207ENST00000580741 PLEKHF1Q96S99 279 aa35.65■■■■□ 3.3
LINC00271-207ENST00000580741 UBR2Q8IWV8 1755 aa35.64■■■■□ 3.3
LINC00271-207ENST00000580741 ZNF790Q6PG37 636 aa35.64■■■■□ 3.3
LINC00271-207ENST00000580741 NEFMP07197 916 aa35.63■■■■□ 3.29
LINC00271-207ENST00000580741 CYP19A1P11511 503 aaPredicted RBP35.63■■■■□ 3.29
LINC00271-207ENST00000580741 ZNF496Q96IT1 587 aaPredicted RBP35.63■■■■□ 3.29
LINC00271-207ENST00000580741 CCDC87Q9NVE4 849 aa35.63■■■■□ 3.29
LINC00271-207ENST00000580741 RFC4P35249 363 aa35.62■■■■□ 3.29
LINC00271-207ENST00000580741 BTBD11A6QL63 1104 aa35.61■■■■□ 3.29
LINC00271-207ENST00000580741 KCNQ3O43525 872 aa35.61■■■■□ 3.29
LINC00271-207ENST00000580741 VSIG10Q8N0Z9 540 aa35.61■■■■□ 3.29
LINC00271-207ENST00000580741 PRKRIP1Q9H875 184 aaPredicted RBP35.59■■■■□ 3.29
LINC00271-207ENST00000580741 C4AP0C0L4 1744 aa35.59■■■■□ 3.29
LINC00271-207ENST00000580741 GYS1P13807 737 aa35.58■■■■□ 3.29
LINC00271-207ENST00000580741 SRP68Q9UHB9 627 aaKnown RBP35.58■■■■□ 3.29
LINC00271-207ENST00000580741 UTRNP46939 3433 aa35.57■■■■□ 3.29
LINC00271-207ENST00000580741 HEG1Q9ULI3 1381 aa35.57■■■■□ 3.28
LINC00271-207ENST00000580741 HTATSF1O43719 755 aaKnown RBP35.57■■■■□ 3.28
LINC00271-207ENST00000580741 MMP10P09238 476 aa35.57■■■■□ 3.28
LINC00271-207ENST00000580741 ZBTB1Q9Y2K1 713 aa35.57■■■■□ 3.28
LINC00271-207ENST00000580741 MAPK8IP3Q9UPT6 1336 aa35.57■■■■□ 3.28
LINC00271-207ENST00000580741 NFE2L2Q16236 605 aa35.56■■■■□ 3.28
LINC00271-207ENST00000580741 SOS1Q07889 1333 aaPredicted RBP35.56■■■■□ 3.28
LINC00271-207ENST00000580741 FMNL2Q96PY5 1086 aa35.54■■■■□ 3.28
LINC00271-207ENST00000580741 PNNQ9H307 717 aaKnown RBP35.54■■■■□ 3.28
LINC00271-207ENST00000580741 PELP1Q8IZL8 1130 aaKnown RBP35.53■■■■□ 3.28
LINC00271-207ENST00000580741 NLGN1Q8N2Q7 840 aa35.53■■■■□ 3.28
LINC00271-207ENST00000580741 USP42Q9H9J4 1324 aaKnown RBP35.53■■■■□ 3.28
LINC00271-207ENST00000580741 CD2APQ9Y5K6 639 aa35.52■■■■□ 3.28
LINC00271-207ENST00000580741 DLG5Q8TDM6 1919 aa35.51■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms