RNA–Protein interactions for RNA: ENST00000580569.1

RFFL-207, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene RFFL, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-207ENST00000580569 RCAN3Q9UKA8 241 aa10.38□□□□□ -0.75
RFFL-207ENST00000580569 PCDHB8Q9UN66 801 aa10.38□□□□□ -0.75
RFFL-207ENST00000580569 PCDHB13Q9Y5F0 798 aa10.38□□□□□ -0.75
RFFL-207ENST00000580569 PPIP5K1Q6PFW1 1433 aa10.38□□□□□ -0.75
RFFL-207ENST00000580569 RGPD5Q99666 1765 aa10.37□□□□□ -0.75
RFFL-207ENST00000580569 PPP1R37O75864 691 aa10.37□□□□□ -0.75
RFFL-207ENST00000580569 RRP1P56182 461 aaKnown RBP10.37□□□□□ -0.75
RFFL-207ENST00000580569 SLFN5Q08AF3 891 aa10.37□□□□□ -0.75
RFFL-207ENST00000580569 EDC4Q6P2E9 1401 aaKnown RBP10.37□□□□□ -0.75
RFFL-207ENST00000580569 NUDT16Q96DE0 195 aaKnown RBP10.37□□□□□ -0.75
RFFL-207ENST00000580569 RBM42Q9BTD8 480 aaKnown RBP10.37□□□□□ -0.75
RFFL-207ENST00000580569 PDGFDQ9GZP0 370 aaPredicted RBP10.37□□□□□ -0.75
RFFL-207ENST00000580569 TSPYL2Q9H2G4 693 aaPredicted RBP10.37□□□□□ -0.75
RFFL-207ENST00000580569 USP54Q70EL1 1684 aa10.37□□□□□ -0.75
RFFL-207ENST00000580569 AATKQ6ZMQ8 1374 aa10.37□□□□□ -0.75
RFFL-207ENST00000580569 MAP3K5Q99683 1374 aa10.37□□□□□ -0.75
RFFL-207ENST00000580569 KAT6BQ8WYB5 2073 aa10.37□□□□□ -0.75
RFFL-207ENST00000580569 QSER1Q2KHR3 1735 aa10.36□□□□□ -0.75
RFFL-207ENST00000580569 APAF1O14727 1248 aa10.36□□□□□ -0.75
RFFL-207ENST00000580569 HDGFL2Q7Z4V5 671 aaPredicted RBP10.36□□□□□ -0.75
RFFL-207ENST00000580569 CCDC146Q8IYE0 955 aa10.36□□□□□ -0.75
RFFL-207ENST00000580569 GGNBP2Q9H3C7 697 aa10.36□□□□□ -0.75
RFFL-207ENST00000580569 PLEKHG3A1L390 1219 aa10.35□□□□□ -0.75
RFFL-207ENST00000580569 ZBTB7AO95365 584 aa10.35□□□□□ -0.75
RFFL-207ENST00000580569 FHDC1Q9C0D6 1143 aaPredicted RBP10.35□□□□□ -0.75
RFFL-207ENST00000580569 ACEP12821 1306 aa10.34□□□□□ -0.75
RFFL-207ENST00000580569 PAPPAQ13219 1627 aa10.34□□□□□ -0.75
RFFL-207ENST00000580569 GCP02774 474 aa10.34□□□□□ -0.75
RFFL-207ENST00000580569 TNNT2P45379 298 aaPredicted RBP10.34□□□□□ -0.75
RFFL-207ENST00000580569 GOLGA2Q08379 1002 aa10.34□□□□□ -0.75
RFFL-207ENST00000580569 PELP1Q8IZL8 1130 aaKnown RBP10.34□□□□□ -0.75
RFFL-207ENST00000580569 ABTB2Q8N961 1025 aa10.34□□□□□ -0.75
RFFL-207ENST00000580569 RUNDC1Q96C34 613 aa10.34□□□□□ -0.75
RFFL-207ENST00000580569 MTFR1LQ9H019 292 aa10.34□□□□□ -0.75
RFFL-207ENST00000580569 CCDC61Q9Y6R9 512 aa10.34□□□□□ -0.75
RFFL-207ENST00000580569 NHSQ6T4R5 1651 aa10.34□□□□□ -0.75
RFFL-207ENST00000580569 SLIT3O75094 1523 aa10.33□□□□□ -0.76
RFFL-207ENST00000580569 ZMYND10O75800 440 aa10.33□□□□□ -0.76
RFFL-207ENST00000580569 PSEN1P49768 467 aa10.33□□□□□ -0.76
RFFL-207ENST00000580569 SLC15A2Q16348 729 aa10.33□□□□□ -0.76
RFFL-207ENST00000580569 DDB1Q16531 1140 aa10.33□□□□□ -0.76
RFFL-207ENST00000580569 CCDC27Q2M243 656 aa10.33□□□□□ -0.76
RFFL-207ENST00000580569 NUTM2GQ5VZR2 741 aa10.33□□□□□ -0.76
RFFL-207ENST00000580569 CFAP53Q96M91 514 aa10.33□□□□□ -0.76
RFFL-207ENST00000580569 SHANK3Q9BYB0 1731 aa10.33□□□□□ -0.76
RFFL-207ENST00000580569 PTF1AQ7RTS3 328 aa10.32□□□□□ -0.76
RFFL-207ENST00000580569 WWC1Q8IX03 1113 aa10.32□□□□□ -0.76
RFFL-207ENST00000580569 PLEKHF1Q96S99 279 aa10.32□□□□□ -0.76
RFFL-207ENST00000580569 CDCA7Q9BWT1 371 aaPredicted RBP10.32□□□□□ -0.76
RFFL-207ENST00000580569 STK32BQ9NY57 414 aa10.32□□□□□ -0.76
RFFL-207ENST00000580569 BTAF1O14981 1849 aa10.31□□□□□ -0.76
RFFL-207ENST00000580569 TXNRD1Q16881 649 aa10.31□□□□□ -0.76
RFFL-207ENST00000580569 B4GALNT3Q6L9W6 998 aa10.31□□□□□ -0.76
RFFL-207ENST00000580569 PIK3C2AO00443 1686 aa10.31□□□□□ -0.76
RFFL-207ENST00000580569 MARCH10Q8NA82 808 aaPredicted RBP10.3□□□□□ -0.76
RFFL-207ENST00000580569 POLKQ9UBT6 870 aa10.3□□□□□ -0.76
RFFL-207ENST00000580569 TUBGCP6Q96RT7 1819 aa10.29□□□□□ -0.76
RFFL-207ENST00000580569 E9PSI1 815 aa10.29□□□□□ -0.76
RFFL-207ENST00000580569 GIGYF1O75420 1035 aaPredicted RBP10.29□□□□□ -0.76
RFFL-207ENST00000580569 CACNB1Q02641 598 aaPredicted RBP10.29□□□□□ -0.76
RFFL-207ENST00000580569 WDR63Q8IWG1 891 aa10.29□□□□□ -0.76
RFFL-207ENST00000580569 USP6P35125 1406 aa10.29□□□□□ -0.76
RFFL-207ENST00000580569 WDR17Q8IZU2 1322 aa10.29□□□□□ -0.76
RFFL-207ENST00000580569 TOM1L2Q6ZVM7 507 aa10.28□□□□□ -0.76
RFFL-207ENST00000580569 NME9Q86XW9 330 aa10.28□□□□□ -0.76
RFFL-207ENST00000580569 FBXO22Q8NEZ5 403 aa10.28□□□□□ -0.76
RFFL-207ENST00000580569 EXOC6Q8TAG9 804 aa10.28□□□□□ -0.76
RFFL-207ENST00000580569 PITPNM1O00562 1244 aa10.27□□□□□ -0.77
RFFL-207ENST00000580569 FBLN1P23142 703 aa10.27□□□□□ -0.77
RFFL-207ENST00000580569 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.27□□□□□ -0.77
RFFL-207ENST00000580569 TTC21BQ7Z4L5 1316 aa10.27□□□□□ -0.77
RFFL-207ENST00000580569 ABCC6O95255 1503 aa10.27□□□□□ -0.77
RFFL-207ENST00000580569 USP31Q70CQ4 1352 aa10.26□□□□□ -0.77
RFFL-207ENST00000580569 DIAPH1O60610 1272 aaKnown RBP10.26□□□□□ -0.77
RFFL-207ENST00000580569 U2AF1L5P0DN76 240 aaPredicted RBP10.26□□□□□ -0.77
RFFL-207ENST00000580569 NLRP6P59044 892 aa10.26□□□□□ -0.77
RFFL-207ENST00000580569 U2AF1Q01081 240 aaKnown RBP eCLIP10.26□□□□□ -0.77
RFFL-207ENST00000580569 SMYD5Q6GMV2 418 aa10.26□□□□□ -0.77
RFFL-207ENST00000580569 EFCAB3Q8N7B9 438 aa10.26□□□□□ -0.77
RFFL-207ENST00000580569 ZNF579Q8NAF0 562 aaKnown RBP10.26□□□□□ -0.77
RFFL-207ENST00000580569 CARD10Q9BWT7 1032 aa10.26□□□□□ -0.77
RFFL-207ENST00000580569 TNS2Q63HR2 1409 aa10.25□□□□□ -0.77
RFFL-207ENST00000580569 PLIN1O60240 522 aa10.25□□□□□ -0.77
RFFL-207ENST00000580569 IL13P35225 146 aa10.25□□□□□ -0.77
RFFL-207ENST00000580569 TMPOP42166 694 aaKnown RBP10.25□□□□□ -0.77
RFFL-207ENST00000580569 GPR162Q16538 588 aa10.25□□□□□ -0.77
RFFL-207ENST00000580569 SLC16A10Q8TF71 515 aa10.25□□□□□ -0.77
RFFL-207ENST00000580569 RSPH6AQ9H0K4 717 aa10.25□□□□□ -0.77
RFFL-207ENST00000580569 TRIM35Q9UPQ4 493 aa10.25□□□□□ -0.77
RFFL-207ENST00000580569 AXIN2Q9Y2T1 843 aa10.25□□□□□ -0.77
RFFL-207ENST00000580569 RRP7AQ9Y3A4 280 aaKnown RBP10.25□□□□□ -0.77
RFFL-207ENST00000580569 LTN1O94822 1766 aa10.24□□□□□ -0.77
RFFL-207ENST00000580569 EXOC5O00471 708 aa10.24□□□□□ -0.77
RFFL-207ENST00000580569 C20orf194Q5TEA3 1177 aa10.24□□□□□ -0.77
RFFL-207ENST00000580569 CHADLQ6NUI6 762 aa10.24□□□□□ -0.77
RFFL-207ENST00000580569 CRBNQ96SW2 442 aa10.24□□□□□ -0.77
RFFL-207ENST00000580569 LY75O60449 1722 aa10.24□□□□□ -0.77
RFFL-207ENST00000580569 FCHSD2O94868 740 aa10.23□□□□□ -0.77
RFFL-207ENST00000580569 ARHGEF25Q86VW2 580 aa10.23□□□□□ -0.77
RFFL-207ENST00000580569 COG3Q96JB2 828 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms