RNA–Protein interactions for RNA: ENST00000580508.1

RBFOX3-204, Transcript of RNA binding fox-1 homolog 3, humanhuman

TSL 2

Gene RBFOX3, Length 260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3-204ENST00000580508 KDRP35968 1356 aa29.64■■■□□ 2.33
RBFOX3-204ENST00000580508 ATP6V1AP38606 617 aa29.62■■■□□ 2.33
RBFOX3-204ENST00000580508 ERVV-2B6SEH9 535 aa29.6■■■□□ 2.33
RBFOX3-204ENST00000580508 GNPATO15228 680 aa29.59■■■□□ 2.33
RBFOX3-204ENST00000580508 COL5A3P25940 1745 aaPredicted RBP29.59■■■□□ 2.33
RBFOX3-204ENST00000580508 KDM6AO15550 1401 aaPredicted RBP29.58■■■□□ 2.33
RBFOX3-204ENST00000580508 DCAF5Q96JK2 942 aa29.58■■■□□ 2.33
RBFOX3-204ENST00000580508 SLC4A9Q96Q91 983 aa29.58■■■□□ 2.33
RBFOX3-204ENST00000580508 HSP90AB1P08238 724 aaKnown RBP29.57■■■□□ 2.32
RBFOX3-204ENST00000580508 PLEKHO1Q53GL0 409 aaPredicted RBP29.57■■■□□ 2.32
RBFOX3-204ENST00000580508 KIF13BQ9NQT8 1826 aa29.55■■■□□ 2.32
RBFOX3-204ENST00000580508 GIGYF1O75420 1035 aaPredicted RBP29.54■■■□□ 2.32
RBFOX3-204ENST00000580508 AMOTQ4VCS5 1084 aa29.54■■■□□ 2.32
RBFOX3-204ENST00000580508 MORC1Q86VD1 984 aa29.54■■■□□ 2.32
RBFOX3-204ENST00000580508 ZNF530Q6P9A1 599 aaPredicted RBP29.53■■■□□ 2.32
RBFOX3-204ENST00000580508 AEBP1Q8IUX7 1158 aa29.53■■■□□ 2.32
RBFOX3-204ENST00000580508 MYH14Q7Z406 1995 aaKnown RBP29.52■■■□□ 2.32
RBFOX3-204ENST00000580508 SENP3-EIF4A1A0A087X0R7 540 aa29.51■■■□□ 2.31
RBFOX3-204ENST00000580508 RC3H1Q5TC82 1133 aaKnown RBP29.51■■■□□ 2.31
RBFOX3-204ENST00000580508 KIAA1551Q9HCM1 1747 aa29.51■■■□□ 2.31
RBFOX3-204ENST00000580508 ADCY9O60503 1353 aa29.51■■■□□ 2.31
RBFOX3-204ENST00000580508 ATP10DQ9P241 1426 aa29.5■■■□□ 2.31
RBFOX3-204ENST00000580508 CNTNAP4Q9C0A0 1308 aa29.49■■■□□ 2.31
RBFOX3-204ENST00000580508 CCER1Q8TC90 406 aaPredicted RBP29.49■■■□□ 2.31
RBFOX3-204ENST00000580508 RBM42Q9BTD8 480 aaKnown RBP29.49■■■□□ 2.31
RBFOX3-204ENST00000580508 RTCBQ9Y3I0 505 aaKnown RBP29.49■■■□□ 2.31
RBFOX3-204ENST00000580508 MMP10P09238 476 aa29.48■■■□□ 2.31
RBFOX3-204ENST00000580508 SCN11AQ9UI33 1791 aa29.48■■■□□ 2.31
RBFOX3-204ENST00000580508 CICQ96RK0 1608 aaPredicted RBP29.47■■■□□ 2.31
RBFOX3-204ENST00000580508 ADRA2BP18089 450 aa29.47■■■□□ 2.31
RBFOX3-204ENST00000580508 IL13P35225 146 aa29.47■■■□□ 2.31
RBFOX3-204ENST00000580508 CABP4P57796 275 aa29.47■■■□□ 2.31
RBFOX3-204ENST00000580508 TRAPPC3LQ5T215 181 aa29.47■■■□□ 2.31
RBFOX3-204ENST00000580508 KNSTRNQ9Y448 316 aa29.47■■■□□ 2.31
RBFOX3-204ENST00000580508 C4AP0C0L4 1744 aa29.46■■■□□ 2.31
RBFOX3-204ENST00000580508 MTHFSP49914 203 aa29.46■■■□□ 2.31
RBFOX3-204ENST00000580508 AMER1Q5JTC6 1135 aaPredicted RBP29.46■■■□□ 2.31
RBFOX3-204ENST00000580508 SULT6B1Q6IMI4 303 aa29.45■■■□□ 2.31
RBFOX3-204ENST00000580508 ARHGEF1Q92888 912 aaKnown RBP29.45■■■□□ 2.31
RBFOX3-204ENST00000580508 RPS6KA4O75676 772 aa29.44■■■□□ 2.3
RBFOX3-204ENST00000580508 C1orf141Q5JVX7 400 aa29.44■■■□□ 2.3
RBFOX3-204ENST00000580508 NLGN1Q8N2Q7 840 aa29.44■■■□□ 2.3
RBFOX3-204ENST00000580508 PXDNLA1KZ92 1463 aa29.43■■■□□ 2.3
RBFOX3-204ENST00000580508 TJP1Q07157 1748 aa29.42■■■□□ 2.3
RBFOX3-204ENST00000580508 N4BP2Q86UW6 1770 aaPredicted RBP29.42■■■□□ 2.3
RBFOX3-204ENST00000580508 WWC3Q9ULE0 1092 aa29.42■■■□□ 2.3
RBFOX3-204ENST00000580508 GYS1P13807 737 aa29.41■■■□□ 2.3
RBFOX3-204ENST00000580508 C10orf71Q711Q0 1435 aa29.41■■■□□ 2.3
RBFOX3-204ENST00000580508 NFATC2IPQ8NCF5 419 aa29.41■■■□□ 2.3
RBFOX3-204ENST00000580508 KIF7Q2M1P5 1343 aa29.4■■■□□ 2.3
RBFOX3-204ENST00000580508 VIRMAQ69YN4 1812 aaKnown RBP29.38■■■□□ 2.29
RBFOX3-204ENST00000580508 BRCA1P38398 1863 aaKnown RBP29.38■■■□□ 2.29
RBFOX3-204ENST00000580508 PTCD1O75127 700 aaKnown RBP29.38■■■□□ 2.29
RBFOX3-204ENST00000580508 TGFB2P61812 414 aa29.38■■■□□ 2.29
RBFOX3-204ENST00000580508 RFC4P35249 363 aa29.37■■■□□ 2.29
RBFOX3-204ENST00000580508 GPBP1L1Q9HC44 474 aaPredicted RBP29.36■■■□□ 2.29
RBFOX3-204ENST00000580508 ADAMTS7Q9UKP4 1686 aa29.35■■■□□ 2.29
RBFOX3-204ENST00000580508 CRKLP46109 303 aaKnown RBP29.35■■■□□ 2.29
RBFOX3-204ENST00000580508 AKAP4Q5JQC9 854 aa29.35■■■□□ 2.29
RBFOX3-204ENST00000580508 PER1O15534 1290 aaPredicted RBP29.34■■■□□ 2.29
RBFOX3-204ENST00000580508 MRC1P22897 1456 aa29.34■■■□□ 2.29
RBFOX3-204ENST00000580508 CCDC87Q9NVE4 849 aa29.32■■■□□ 2.28
RBFOX3-204ENST00000580508 A0A0G2JLW4 131 aa29.31■■■□□ 2.28
RBFOX3-204ENST00000580508 SLC52A2Q9HAB3 445 aa29.31■■■□□ 2.28
RBFOX3-204ENST00000580508 USP42Q9H9J4 1324 aaKnown RBP29.3■■■□□ 2.28
RBFOX3-204ENST00000580508 LGR6Q9HBX8 967 aa29.3■■■□□ 2.28
RBFOX3-204ENST00000580508 PARP3Q9Y6F1 533 aa29.3■■■□□ 2.28
RBFOX3-204ENST00000580508 CEP350Q5VT06 3117 aa29.29■■■□□ 2.28
RBFOX3-204ENST00000580508 INTS5Q6P9B9 1019 aaKnown RBP29.29■■■□□ 2.28
RBFOX3-204ENST00000580508 ZNF526Q8TF50 670 aaPredicted RBP29.29■■■□□ 2.28
RBFOX3-204ENST00000580508 DPEP1P16444 411 aa29.28■■■□□ 2.28
RBFOX3-204ENST00000580508 SRP68Q9UHB9 627 aaKnown RBP29.28■■■□□ 2.28
RBFOX3-204ENST00000580508 ARFGEF1Q9Y6D6 1849 aa29.28■■■□□ 2.28
RBFOX3-204ENST00000580508 BCS1LQ9Y276 419 aa29.27■■■□□ 2.28
RBFOX3-204ENST00000580508 RNMTO43148 476 aaKnown RBP29.26■■■□□ 2.27
RBFOX3-204ENST00000580508 HMOX1P09601 288 aa29.26■■■□□ 2.27
RBFOX3-204ENST00000580508 KCNA3P22001 575 aa29.26■■■□□ 2.27
RBFOX3-204ENST00000580508 FKBP8Q14318 412 aa29.26■■■□□ 2.27
RBFOX3-204ENST00000580508 KCPQ6ZWJ8 1503 aa29.25■■■□□ 2.27
RBFOX3-204ENST00000580508 DNAJC10Q8IXB1 793 aa29.25■■■□□ 2.27
RBFOX3-204ENST00000580508 DDR1Q08345 913 aa29.24■■■□□ 2.27
RBFOX3-204ENST00000580508 DIAPH1O60610 1272 aaKnown RBP29.23■■■□□ 2.27
RBFOX3-204ENST00000580508 MTHFSDQ2M296 383 aaKnown RBP29.23■■■□□ 2.27
RBFOX3-204ENST00000580508 UBR2Q8IWV8 1755 aa29.23■■■□□ 2.27
RBFOX3-204ENST00000580508 COL3A1P02461 1466 aaPredicted RBP29.23■■■□□ 2.27
RBFOX3-204ENST00000580508 KIF3CO14782 793 aa29.22■■■□□ 2.27
RBFOX3-204ENST00000580508 NPC1L1Q9UHC9 1359 aa29.22■■■□□ 2.27
RBFOX3-204ENST00000580508 SOS1Q07889 1333 aaPredicted RBP29.21■■■□□ 2.27
RBFOX3-204ENST00000580508 CYP19A1P11511 503 aaPredicted RBP29.21■■■□□ 2.27
RBFOX3-204ENST00000580508 TM4SF1P30408 202 aa29.21■■■□□ 2.27
RBFOX3-204ENST00000580508 SLC39A6Q13433 755 aa29.21■■■□□ 2.27
RBFOX3-204ENST00000580508 CC2D1BQ5T0F9 858 aaKnown RBP29.21■■■□□ 2.27
RBFOX3-204ENST00000580508 FCHSD2O94868 740 aa29.2■■■□□ 2.26
RBFOX3-204ENST00000580508 POLRMTO00411 1230 aaKnown RBP29.18■■■□□ 2.26
RBFOX3-204ENST00000580508 HSPA6P17066 643 aa29.18■■■□□ 2.26
RBFOX3-204ENST00000580508 ARHGAP27Q6ZUM4 889 aa29.18■■■□□ 2.26
RBFOX3-204ENST00000580508 AFDNP55196 1824 aaKnown RBP29.17■■■□□ 2.26
RBFOX3-204ENST00000580508 USPL1Q5W0Q7 1092 aa29.16■■■□□ 2.26
RBFOX3-204ENST00000580508 VSIG10Q8N0Z9 540 aa29.16■■■□□ 2.26
RBFOX3-204ENST00000580508 PIM2Q9P1W9 311 aa29.16■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms