RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 SIK1P57059 783 aa33.54■■■□□ 2.96
CDC42EP4-205ENST00000580315 SMIM5Q71RC9 77 aa33.54■■■□□ 2.96
CDC42EP4-205ENST00000580315 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.53■■■□□ 2.96
CDC42EP4-205ENST00000580315 PHF14O94880 888 aa33.53■■■□□ 2.96
CDC42EP4-205ENST00000580315 TMOD3Q9NYL9 352 aa33.53■■■□□ 2.96
CDC42EP4-205ENST00000580315 IFNL2Q8IZJ0 200 aa33.52■■■□□ 2.96
CDC42EP4-205ENST00000580315 DIAPH1O60610 1272 aaKnown RBP33.51■■■□□ 2.95
CDC42EP4-205ENST00000580315 PLEKHO1Q53GL0 409 aaPredicted RBP33.51■■■□□ 2.95
CDC42EP4-205ENST00000580315 SULT6B1Q6IMI4 303 aa33.51■■■□□ 2.95
CDC42EP4-205ENST00000580315 LINC00116Q8NCU8 138 aa33.51■■■□□ 2.95
CDC42EP4-205ENST00000580315 PHKG2P15735 406 aa33.5■■■□□ 2.95
CDC42EP4-205ENST00000580315 AEBP1Q8IUX7 1158 aa33.5■■■□□ 2.95
CDC42EP4-205ENST00000580315 ASAP1Q9ULH1 1129 aa33.5■■■□□ 2.95
CDC42EP4-205ENST00000580315 SSFA2P28290 1259 aa33.49■■■□□ 2.95
CDC42EP4-205ENST00000580315 AMOTQ4VCS5 1084 aa33.49■■■□□ 2.95
CDC42EP4-205ENST00000580315 UBR3Q6ZT12 1888 aa33.48■■■□□ 2.95
CDC42EP4-205ENST00000580315 KDRP35968 1356 aa33.47■■■□□ 2.95
CDC42EP4-205ENST00000580315 ITPK1Q13572 414 aa33.46■■■□□ 2.95
CDC42EP4-205ENST00000580315 ATP6V1AP38606 617 aa33.44■■■□□ 2.94
CDC42EP4-205ENST00000580315 CFAP53Q96M91 514 aa33.44■■■□□ 2.94
CDC42EP4-205ENST00000580315 GNPATO15228 680 aa33.43■■■□□ 2.94
CDC42EP4-205ENST00000580315 ATG3Q9NT62 314 aa33.43■■■□□ 2.94
CDC42EP4-205ENST00000580315 HSP90AB1P08238 724 aaKnown RBP33.42■■■□□ 2.94
CDC42EP4-205ENST00000580315 ZNF530Q6P9A1 599 aaPredicted RBP33.42■■■□□ 2.94
CDC42EP4-205ENST00000580315 ATP10DQ9P241 1426 aa33.4■■■□□ 2.94
CDC42EP4-205ENST00000580315 HMOX1P09601 288 aa33.39■■■□□ 2.94
CDC42EP4-205ENST00000580315 PPP2R1AP30153 589 aa33.39■■■□□ 2.94
CDC42EP4-205ENST00000580315 C1orf141Q5JVX7 400 aa33.39■■■□□ 2.94
CDC42EP4-205ENST00000580315 COL3A1P02461 1466 aaPredicted RBP33.37■■■□□ 2.93
CDC42EP4-205ENST00000580315 U2SURPO15042 1029 aaKnown RBP33.37■■■□□ 2.93
CDC42EP4-205ENST00000580315 DCAF5Q96JK2 942 aa33.37■■■□□ 2.93
CDC42EP4-205ENST00000580315 WWC3Q9ULE0 1092 aa33.36■■■□□ 2.93
CDC42EP4-205ENST00000580315 ERVV-2B6SEH9 535 aa33.35■■■□□ 2.93
CDC42EP4-205ENST00000580315 CEP350Q5VT06 3117 aa33.34■■■□□ 2.93
CDC42EP4-205ENST00000580315 SLC4A9Q96Q91 983 aa33.33■■■□□ 2.93
CDC42EP4-205ENST00000580315 ADCY9O60503 1353 aa33.33■■■□□ 2.93
CDC42EP4-205ENST00000580315 DDX10Q13206 875 aaKnown RBP33.32■■■□□ 2.92
CDC42EP4-205ENST00000580315 NUDCQ9Y266 331 aa33.32■■■□□ 2.92
CDC42EP4-205ENST00000580315 MMP10P09238 476 aa33.31■■■□□ 2.92
CDC42EP4-205ENST00000580315 GPBP1L1Q9HC44 474 aaPredicted RBP33.31■■■□□ 2.92
CDC42EP4-205ENST00000580315 RBM42Q9BTD8 480 aaKnown RBP33.3■■■□□ 2.92
CDC42EP4-205ENST00000580315 RTCBQ9Y3I0 505 aaKnown RBP33.3■■■□□ 2.92
CDC42EP4-205ENST00000580315 TRAPPC3LQ5T215 181 aa33.29■■■□□ 2.92
CDC42EP4-205ENST00000580315 AKAP4Q5JQC9 854 aa33.27■■■□□ 2.92
CDC42EP4-205ENST00000580315 CABP4P57796 275 aa33.26■■■□□ 2.91
CDC42EP4-205ENST00000580315 RC3H1Q5TC82 1133 aaKnown RBP33.26■■■□□ 2.91
CDC42EP4-205ENST00000580315 NLGN1Q8N2Q7 840 aa33.25■■■□□ 2.91
CDC42EP4-205ENST00000580315 ZNF526Q8TF50 670 aaPredicted RBP33.25■■■□□ 2.91
CDC42EP4-205ENST00000580315 KDM6AO15550 1401 aaPredicted RBP33.25■■■□□ 2.91
CDC42EP4-205ENST00000580315 ARHGEF1Q92888 912 aaKnown RBP33.24■■■□□ 2.91
CDC42EP4-205ENST00000580315 CNTNAP4Q9C0A0 1308 aa33.24■■■□□ 2.91
CDC42EP4-205ENST00000580315 ZNF831Q5JPB2 1677 aa33.23■■■□□ 2.91
CDC42EP4-205ENST00000580315 ADRA2BP18089 450 aa33.23■■■□□ 2.91
CDC42EP4-205ENST00000580315 RALBP1Q15311 655 aa33.22■■■□□ 2.91
CDC42EP4-205ENST00000580315 MTHFSDQ2M296 383 aaKnown RBP33.22■■■□□ 2.91
CDC42EP4-205ENST00000580315 RPS6KA4O75676 772 aa33.21■■■□□ 2.91
CDC42EP4-205ENST00000580315 PXDNLA1KZ92 1463 aa33.2■■■□□ 2.91
CDC42EP4-205ENST00000580315 U2AF1L5P0DN76 240 aaPredicted RBP33.2■■■□□ 2.91
CDC42EP4-205ENST00000580315 TGFB2P61812 414 aa33.2■■■□□ 2.91
CDC42EP4-205ENST00000580315 U2AF1Q01081 240 aaKnown RBP eCLIP33.2■■■□□ 2.91
CDC42EP4-205ENST00000580315 CICQ96RK0 1608 aaPredicted RBP33.18■■■□□ 2.9
CDC42EP4-205ENST00000580315 GYS1P13807 737 aa33.18■■■□□ 2.9
CDC42EP4-205ENST00000580315 RFC4P35249 363 aa33.18■■■□□ 2.9
CDC42EP4-205ENST00000580315 GAS2L2Q8NHY3 880 aa33.18■■■□□ 2.9
CDC42EP4-205ENST00000580315 COL5A3P25940 1745 aaPredicted RBP33.16■■■□□ 2.9
CDC42EP4-205ENST00000580315 A0A0G2JLW4 131 aa33.16■■■□□ 2.9
CDC42EP4-205ENST00000580315 PTCD1O75127 700 aaKnown RBP33.16■■■□□ 2.9
CDC42EP4-205ENST00000580315 NFATC2IPQ8NCF5 419 aa33.16■■■□□ 2.9
CDC42EP4-205ENST00000580315 C10orf71Q711Q0 1435 aa33.16■■■□□ 2.9
CDC42EP4-205ENST00000580315 KIF13BQ9NQT8 1826 aa33.16■■■□□ 2.9
CDC42EP4-205ENST00000580315 PRKAR2BP31323 418 aa33.15■■■□□ 2.9
CDC42EP4-205ENST00000580315 RSPH6AQ9H0K4 717 aa33.15■■■□□ 2.9
CDC42EP4-205ENST00000580315 RNMTO43148 476 aaKnown RBP33.13■■■□□ 2.89
CDC42EP4-205ENST00000580315 FCHSD2O94868 740 aa33.13■■■□□ 2.89
CDC42EP4-205ENST00000580315 CCDC87Q9NVE4 849 aa33.13■■■□□ 2.89
CDC42EP4-205ENST00000580315 BCS1LQ9Y276 419 aa33.13■■■□□ 2.89
CDC42EP4-205ENST00000580315 KIAA1551Q9HCM1 1747 aa33.12■■■□□ 2.89
CDC42EP4-205ENST00000580315 LGR6Q9HBX8 967 aa33.12■■■□□ 2.89
CDC42EP4-205ENST00000580315 PARP3Q9Y6F1 533 aa33.12■■■□□ 2.89
CDC42EP4-205ENST00000580315 CRKLP46109 303 aaKnown RBP33.11■■■□□ 2.89
CDC42EP4-205ENST00000580315 SLC52A2Q9HAB3 445 aa33.11■■■□□ 2.89
CDC42EP4-205ENST00000580315 DPEP1P16444 411 aa33.1■■■□□ 2.89
CDC42EP4-205ENST00000580315 HSPA6P17066 643 aa33.1■■■□□ 2.89
CDC42EP4-205ENST00000580315 MYH14Q7Z406 1995 aaKnown RBP33.1■■■□□ 2.89
CDC42EP4-205ENST00000580315 N4BP2Q86UW6 1770 aaPredicted RBP33.09■■■□□ 2.89
CDC42EP4-205ENST00000580315 C4AP0C0L4 1744 aa33.09■■■□□ 2.89
CDC42EP4-205ENST00000580315 GNAT3A8MTJ3 354 aa33.09■■■□□ 2.89
CDC42EP4-205ENST00000580315 KIF3CO14782 793 aa33.08■■■□□ 2.89
CDC42EP4-205ENST00000580315 PHACTR3Q96KR7 559 aa33.08■■■□□ 2.89
CDC42EP4-205ENST00000580315 SRP68Q9UHB9 627 aaKnown RBP33.06■■■□□ 2.88
CDC42EP4-205ENST00000580315 SCN11AQ9UI33 1791 aa33.06■■■□□ 2.88
CDC42EP4-205ENST00000580315 MYBBP1AQ9BQG0 1328 aaKnown RBP33.05■■■□□ 2.88
CDC42EP4-205ENST00000580315 ARHGAP27Q6ZUM4 889 aa33.05■■■□□ 2.88
CDC42EP4-205ENST00000580315 MRC1P22897 1456 aa33.05■■■□□ 2.88
CDC42EP4-205ENST00000580315 NEFMP07197 916 aa33.04■■■□□ 2.88
CDC42EP4-205ENST00000580315 USP42Q9H9J4 1324 aaKnown RBP33.03■■■□□ 2.88
CDC42EP4-205ENST00000580315 KCNA3P22001 575 aa33.03■■■□□ 2.88
CDC42EP4-205ENST00000580315 FKBP8Q14318 412 aa33.03■■■□□ 2.88
CDC42EP4-205ENST00000580315 INTS5Q6P9B9 1019 aaKnown RBP33.02■■■□□ 2.88
CDC42EP4-205ENST00000580315 TEFQ10587 303 aa33.01■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms