RNA–Protein interactions for RNA: ENST00000580219.5

SNX11-206, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-206ENST00000580219 RNF123Q5XPI4 1314 aa12.94□□□□□ -0.34
SNX11-206ENST00000580219 EVX2Q03828 476 aa12.94□□□□□ -0.34
SNX11-206ENST00000580219 BCL9O00512 1426 aa12.94□□□□□ -0.34
SNX11-206ENST00000580219 CICQ96RK0 1608 aaPredicted RBP12.93□□□□□ -0.34
SNX11-206ENST00000580219 RGS19P49795 217 aa12.93□□□□□ -0.34
SNX11-206ENST00000580219 MTHFSP49914 203 aa12.93□□□□□ -0.34
SNX11-206ENST00000580219 PNPLA7Q6ZV29 1317 aa12.92□□□□□ -0.34
SNX11-206ENST00000580219 PRDM10Q9NQV6 1147 aa12.92□□□□□ -0.34
SNX11-206ENST00000580219 BTAF1O14981 1849 aa12.92□□□□□ -0.34
SNX11-206ENST00000580219 ZNF521Q96K83 1311 aa12.91□□□□□ -0.34
SNX11-206ENST00000580219 C19orf67A6NJJ6 358 aa12.91□□□□□ -0.34
SNX11-206ENST00000580219 FOXN1O15353 648 aa12.91□□□□□ -0.34
SNX11-206ENST00000580219 MNX1P50219 401 aaPredicted RBP12.91□□□□□ -0.34
SNX11-206ENST00000580219 MARCH10Q8NA82 808 aaPredicted RBP12.91□□□□□ -0.34
SNX11-206ENST00000580219 GGNBP2Q9H3C7 697 aa12.91□□□□□ -0.34
SNX11-206ENST00000580219 COL3A1P02461 1466 aaPredicted RBP12.91□□□□□ -0.34
SNX11-206ENST00000580219 TTC21BQ7Z4L5 1316 aa12.9□□□□□ -0.34
SNX11-206ENST00000580219 PIK3C2AO00443 1686 aa12.89□□□□□ -0.35
SNX11-206ENST00000580219 PAK3O75914 559 aaPredicted RBP12.89□□□□□ -0.35
SNX11-206ENST00000580219 TNNT2P45379 298 aaPredicted RBP12.89□□□□□ -0.35
SNX11-206ENST00000580219 COL5A2P05997 1499 aaPredicted RBP12.89□□□□□ -0.35
SNX11-206ENST00000580219 KAT6BQ8WYB5 2073 aa12.89□□□□□ -0.35
SNX11-206ENST00000580219 TTC21AQ8NDW8 1320 aa12.88□□□□□ -0.35
SNX11-206ENST00000580219 CRB1P82279 1406 aa12.88□□□□□ -0.35
SNX11-206ENST00000580219 RUNDC1Q96C34 613 aa12.88□□□□□ -0.35
SNX11-206ENST00000580219 USP54Q70EL1 1684 aa12.87□□□□□ -0.35
SNX11-206ENST00000580219 CCDC85CA6NKD9 419 aa12.87□□□□□ -0.35
SNX11-206ENST00000580219 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.87□□□□□ -0.35
SNX11-206ENST00000580219 LRRC4BQ9NT99 713 aa12.87□□□□□ -0.35
SNX11-206ENST00000580219 CD2APQ9Y5K6 639 aa12.87□□□□□ -0.35
SNX11-206ENST00000580219 TNRC6CQ9HCJ0 1690 aaKnown RBP12.86□□□□□ -0.35
SNX11-206ENST00000580219 GOLGA2Q08379 1002 aa12.86□□□□□ -0.35
SNX11-206ENST00000580219 NME9Q86XW9 330 aa12.86□□□□□ -0.35
SNX11-206ENST00000580219 FBXO3Q9UK99 471 aa12.86□□□□□ -0.35
SNX11-206ENST00000580219 IGSF1Q8N6C5 1336 aa12.86□□□□□ -0.35
SNX11-206ENST00000580219 PKD1L3Q7Z443 1732 aa12.85□□□□□ -0.35
SNX11-206ENST00000580219 APAF1O14727 1248 aa12.85□□□□□ -0.35
SNX11-206ENST00000580219 CCDC27Q2M243 656 aa12.85□□□□□ -0.35
SNX11-206ENST00000580219 COG3Q96JB2 828 aa12.85□□□□□ -0.35
SNX11-206ENST00000580219 PNNQ9H307 717 aaKnown RBP12.85□□□□□ -0.35
SNX11-206ENST00000580219 RCAN3Q9UKA8 241 aa12.85□□□□□ -0.35
SNX11-206ENST00000580219 USP31Q70CQ4 1352 aa12.84□□□□□ -0.35
SNX11-206ENST00000580219 CCDC146Q8IYE0 955 aa12.84□□□□□ -0.35
SNX11-206ENST00000580219 ABTB2Q8N961 1025 aa12.84□□□□□ -0.35
SNX11-206ENST00000580219 TFCP2L1Q9NZI6 479 aa12.84□□□□□ -0.35
SNX11-206ENST00000580219 SALL2Q9Y467 1007 aaPredicted RBP12.84□□□□□ -0.35
SNX11-206ENST00000580219 MSL1Q68DK7 614 aa12.83□□□□□ -0.36
SNX11-206ENST00000580219 TRMT2AQ8IZ69 625 aaKnown RBP12.83□□□□□ -0.36
SNX11-206ENST00000580219 SMC1BQ8NDV3 1235 aa12.83□□□□□ -0.36
SNX11-206ENST00000580219 CDCA7LQ96GN5 454 aa12.83□□□□□ -0.36
SNX11-206ENST00000580219 PPP4R2Q9NY27 417 aa12.83□□□□□ -0.36
SNX11-206ENST00000580219 KCPQ6ZWJ8 1503 aa12.83□□□□□ -0.36
SNX11-206ENST00000580219 C10orf71Q711Q0 1435 aa12.82□□□□□ -0.36
SNX11-206ENST00000580219 E9PSI1 815 aa12.82□□□□□ -0.36
SNX11-206ENST00000580219 DIAPH1O60610 1272 aaKnown RBP12.82□□□□□ -0.36
SNX11-206ENST00000580219 U2AF1L5P0DN76 240 aaPredicted RBP12.82□□□□□ -0.36
SNX11-206ENST00000580219 CTCFP49711 727 aaPredicted RBP12.82□□□□□ -0.36
SNX11-206ENST00000580219 U2AF1Q01081 240 aaKnown RBP eCLIP12.82□□□□□ -0.36
SNX11-206ENST00000580219 SLFN5Q08AF3 891 aa12.82□□□□□ -0.36
SNX11-206ENST00000580219 DUSP27Q5VZP5 1158 aa12.82□□□□□ -0.36
SNX11-206ENST00000580219 NUTM2GQ5VZR2 741 aa12.82□□□□□ -0.36
SNX11-206ENST00000580219 SP7Q8TDD2 431 aaPredicted RBP12.82□□□□□ -0.36
SNX11-206ENST00000580219 POLKQ9UBT6 870 aa12.82□□□□□ -0.36
SNX11-206ENST00000580219 SLIT3O75094 1523 aa12.82□□□□□ -0.36
SNX11-206ENST00000580219 RRP1P56182 461 aaKnown RBP12.81□□□□□ -0.36
SNX11-206ENST00000580219 NLRP6P59044 892 aa12.81□□□□□ -0.36
SNX11-206ENST00000580219 WDR63Q8IWG1 891 aa12.81□□□□□ -0.36
SNX11-206ENST00000580219 ACSBG1Q96GR2 724 aa12.81□□□□□ -0.36
SNX11-206ENST00000580219 LBX1P52954 281 aa12.8□□□□□ -0.36
SNX11-206ENST00000580219 AIDAQ96BJ3 306 aa12.8□□□□□ -0.36
SNX11-206ENST00000580219 CPDO75976 1380 aa12.8□□□□□ -0.36
SNX11-206ENST00000580219 PXDNLA1KZ92 1463 aa12.79□□□□□ -0.36
SNX11-206ENST00000580219 WWC1Q8IX03 1113 aa12.79□□□□□ -0.36
SNX11-206ENST00000580219 PLEKHF1Q96S99 279 aa12.79□□□□□ -0.36
SNX11-206ENST00000580219 NFAT5O94916 1531 aa12.78□□□□□ -0.36
SNX11-206ENST00000580219 FCHSD2O94868 740 aa12.78□□□□□ -0.36
SNX11-206ENST00000580219 MAP2P11137 1827 aaKnown RBP12.77□□□□□ -0.37
SNX11-206ENST00000580219 U2SURPO15042 1029 aaKnown RBP12.77□□□□□ -0.37
SNX11-206ENST00000580219 IRX6P78412 446 aaPredicted RBP12.77□□□□□ -0.37
SNX11-206ENST00000580219 CFAP44Q96MT7 982 aa12.77□□□□□ -0.37
SNX11-206ENST00000580219 RRAGCQ9HB90 399 aa12.77□□□□□ -0.37
SNX11-206ENST00000580219 MKRN1Q9UHC7 482 aaKnown RBP12.77□□□□□ -0.37
SNX11-206ENST00000580219 MAPK8IP3Q9UPT6 1336 aa12.77□□□□□ -0.37
SNX11-206ENST00000580219 PLEKHG2Q9H7P9 1386 aa12.77□□□□□ -0.37
SNX11-206ENST00000580219 CD44P16070 742 aaKnown RBP12.76□□□□□ -0.37
SNX11-206ENST00000580219 TOM1L2Q6ZVM7 507 aa12.76□□□□□ -0.37
SNX11-206ENST00000580219 KCNH5Q8NCM2 988 aa12.76□□□□□ -0.37
SNX11-206ENST00000580219 KDM2BQ8NHM5 1336 aa12.76□□□□□ -0.37
SNX11-206ENST00000580219 GCP02774 474 aa12.75□□□□□ -0.37
SNX11-206ENST00000580219 IL13P35225 146 aa12.75□□□□□ -0.37
SNX11-206ENST00000580219 KIF24Q5T7B8 1368 aa12.75□□□□□ -0.37
SNX11-206ENST00000580219 PLCD3Q8N3E9 789 aa12.75□□□□□ -0.37
SNX11-206ENST00000580219 CDCA7Q9BWT1 371 aaPredicted RBP12.75□□□□□ -0.37
SNX11-206ENST00000580219 VIRMAQ69YN4 1812 aaKnown RBP12.74□□□□□ -0.37
SNX11-206ENST00000580219 LTN1O94822 1766 aa12.74□□□□□ -0.37
SNX11-206ENST00000580219 N4BP2Q86UW6 1770 aaPredicted RBP12.74□□□□□ -0.37
SNX11-206ENST00000580219 LY75O60449 1722 aa12.74□□□□□ -0.37
SNX11-206ENST00000580219 IL16Q14005 1332 aa12.74□□□□□ -0.37
SNX11-206ENST00000580219 SOX12O15370 315 aa12.74□□□□□ -0.37
SNX11-206ENST00000580219 NEFMP07197 916 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 156.9 ms