RNA–Protein interactions for RNA: ENST00000580103.6

NSRP1-208, Transcript of nuclear speckle splicing regulatory protein 1, human

TSL 5

Gene NSRP1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NSRP1-208	ENST00000580103	LOC102724428	A0A0B4J2F2	783 aa		13.75	□□□□□ -0.21
NSRP1-208	ENST00000580103	SIK1	P57059	783 aa		13.75	□□□□□ -0.21
NSRP1-208	ENST00000580103	ITPK1	Q13572	414 aa		13.75	□□□□□ -0.21
NSRP1-208	ENST00000580103	FLAD1	Q8NFF5	587 aa		13.75	□□□□□ -0.21
NSRP1-208	ENST00000580103	PANK3	Q9H999	370 aa		13.75	□□□□□ -0.21
NSRP1-208	ENST00000580103	ASAP1	Q9ULH1	1129 aa		13.75	□□□□□ -0.21
NSRP1-208	ENST00000580103	VIRMA	Q69YN4	1812 aa	Known RBP	13.74	□□□□□ -0.21
NSRP1-208	ENST00000580103	KIF13B	Q9NQT8	1826 aa		13.74	□□□□□ -0.21
NSRP1-208	ENST00000580103	KIAA1551	Q9HCM1	1747 aa		13.74	□□□□□ -0.21
NSRP1-208	ENST00000580103	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
NSRP1-208	ENST00000580103	IFNL2	Q8IZJ0	200 aa		13.74	□□□□□ -0.21
NSRP1-208	ENST00000580103	KLHL34	Q8N239	644 aa		13.74	□□□□□ -0.21
NSRP1-208	ENST00000580103	ATG3	Q9NT62	314 aa		13.74	□□□□□ -0.21
NSRP1-208	ENST00000580103	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.74	□□□□□ -0.21
NSRP1-208	ENST00000580103	KDR	P35968	1356 aa		13.73	□□□□□ -0.21
NSRP1-208	ENST00000580103	SLC4A2	P04920	1241 aa		13.73	□□□□□ -0.21
NSRP1-208	ENST00000580103	HMGB2	P26583	209 aa	Known RBP	13.73	□□□□□ -0.21
NSRP1-208	ENST00000580103	TNNT2	P45379	298 aa	Predicted RBP	13.73	□□□□□ -0.21
NSRP1-208	ENST00000580103	SLC4A9	Q96Q91	983 aa		13.73	□□□□□ -0.21
NSRP1-208	ENST00000580103	CD2AP	Q9Y5K6	639 aa		13.73	□□□□□ -0.21
NSRP1-208	ENST00000580103	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.72	□□□□□ -0.21
NSRP1-208	ENST00000580103	TMOD3	Q9NYL9	352 aa		13.72	□□□□□ -0.21
NSRP1-208	ENST00000580103	SCN11A	Q9UI33	1791 aa		13.72	□□□□□ -0.21
NSRP1-208	ENST00000580103	KDM6A	O15550	1401 aa	Predicted RBP	13.72	□□□□□ -0.21
NSRP1-208	ENST00000580103	SSFA2	P28290	1259 aa		13.71	□□□□□ -0.21
NSRP1-208	ENST00000580103	AK7	Q96M32	723 aa		13.71	□□□□□ -0.21
NSRP1-208	ENST00000580103	POLR3GL	Q9BT43	218 aa		13.71	□□□□□ -0.21
NSRP1-208	ENST00000580103	C4A	P0C0L4	1744 aa		13.7	□□□□□ -0.22
NSRP1-208	ENST00000580103	CIC	Q96RK0	1608 aa	Predicted RBP	13.69	□□□□□ -0.22
NSRP1-208	ENST00000580103	ERVV-2	B6SEH9	535 aa		13.69	□□□□□ -0.22
NSRP1-208	ENST00000580103	PHF14	O94880	888 aa		13.69	□□□□□ -0.22
NSRP1-208	ENST00000580103	C1QTNF8	P60827	252 aa		13.69	□□□□□ -0.22
NSRP1-208	ENST00000580103	PELP1	Q8IZL8	1130 aa	Known RBP	13.69	□□□□□ -0.22
NSRP1-208	ENST00000580103	N4BP2	Q86UW6	1770 aa	Predicted RBP	13.68	□□□□□ -0.22
NSRP1-208	ENST00000580103	BRCA1	P38398	1863 aa	Known RBP	13.68	□□□□□ -0.22
NSRP1-208	ENST00000580103	TJP1	Q07157	1748 aa		13.68	□□□□□ -0.22
NSRP1-208	ENST00000580103	GRIN3B	O60391	1043 aa		13.68	□□□□□ -0.22
NSRP1-208	ENST00000580103	ATP6V1A	P38606	617 aa		13.68	□□□□□ -0.22
NSRP1-208	ENST00000580103	AEBP1	Q8IUX7	1158 aa		13.68	□□□□□ -0.22
NSRP1-208	ENST00000580103	DCAF5	Q96JK2	942 aa		13.68	□□□□□ -0.22
NSRP1-208	ENST00000580103	ADAMTS7	Q9UKP4	1686 aa		13.67	□□□□□ -0.22
NSRP1-208	ENST00000580103	IL13	P35225	146 aa		13.67	□□□□□ -0.22
NSRP1-208	ENST00000580103	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.67	□□□□□ -0.22
NSRP1-208	ENST00000580103	GNPAT	O15228	680 aa		13.66	□□□□□ -0.22
NSRP1-208	ENST00000580103	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.66	□□□□□ -0.22
NSRP1-208	ENST00000580103	RC3H1	Q5TC82	1133 aa	Known RBP	13.66	□□□□□ -0.22
NSRP1-208	ENST00000580103	ADCY9	O60503	1353 aa		13.66	□□□□□ -0.22
NSRP1-208	ENST00000580103	HSP90AB1	P08238	724 aa	Known RBP	13.65	□□□□□ -0.22
NSRP1-208	ENST00000580103	AMOT	Q4VCS5	1084 aa		13.65	□□□□□ -0.22
NSRP1-208	ENST00000580103	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.65	□□□□□ -0.22
NSRP1-208	ENST00000580103	MORC1	Q86VD1	984 aa		13.65	□□□□□ -0.22
NSRP1-208	ENST00000580103	PER1	O15534	1290 aa	Predicted RBP	13.64	□□□□□ -0.23
NSRP1-208	ENST00000580103	CNTNAP4	Q9C0A0	1308 aa		13.64	□□□□□ -0.23
NSRP1-208	ENST00000580103	SULT6B1	Q6IMI4	303 aa		13.63	□□□□□ -0.23
NSRP1-208	ENST00000580103	CCER1	Q8TC90	406 aa	Predicted RBP	13.63	□□□□□ -0.23
NSRP1-208	ENST00000580103	ARHGEF1	Q92888	912 aa	Known RBP	13.63	□□□□□ -0.23
NSRP1-208	ENST00000580103	ATP10D	Q9P241	1426 aa		13.63	□□□□□ -0.23
NSRP1-208	ENST00000580103	KIF7	Q2M1P5	1343 aa		13.63	□□□□□ -0.23
NSRP1-208	ENST00000580103	PXDNL	A1KZ92	1463 aa		13.62	□□□□□ -0.23
NSRP1-208	ENST00000580103	RPS6KA4	O75676	772 aa		13.62	□□□□□ -0.23
NSRP1-208	ENST00000580103	MMP10	P09238	476 aa		13.62	□□□□□ -0.23
NSRP1-208	ENST00000580103	RBM42	Q9BTD8	480 aa	Known RBP	13.62	□□□□□ -0.23
NSRP1-208	ENST00000580103	KNSTRN	Q9Y448	316 aa		13.62	□□□□□ -0.23
NSRP1-208	ENST00000580103	GIGYF1	O75420	1035 aa	Predicted RBP	13.61	□□□□□ -0.23
NSRP1-208	ENST00000580103	GYS1	P13807	737 aa		13.61	□□□□□ -0.23
NSRP1-208	ENST00000580103	MTHFS	P49914	203 aa		13.61	□□□□□ -0.23
NSRP1-208	ENST00000580103	CABP4	P57796	275 aa		13.61	□□□□□ -0.23
NSRP1-208	ENST00000580103	TRAPPC3L	Q5T215	181 aa		13.61	□□□□□ -0.23
NSRP1-208	ENST00000580103	NFATC2IP	Q8NCF5	419 aa		13.61	□□□□□ -0.23
NSRP1-208	ENST00000580103	RTCB	Q9Y3I0	505 aa	Known RBP	13.61	□□□□□ -0.23
NSRP1-208	ENST00000580103	ARFGEF1	Q9Y6D6	1849 aa		13.61	□□□□□ -0.23
NSRP1-208	ENST00000580103	C10orf71	Q711Q0	1435 aa		13.61	□□□□□ -0.23
NSRP1-208	ENST00000580103	MRC1	P22897	1456 aa		13.61	□□□□□ -0.23
NSRP1-208	ENST00000580103	UBR2	Q8IWV8	1755 aa		13.6	□□□□□ -0.23
NSRP1-208	ENST00000580103	SENP3-EIF4A1	A0A087X0R7	540 aa		13.59	□□□□□ -0.23
NSRP1-208	ENST00000580103	NLGN1	Q8N2Q7	840 aa		13.59	□□□□□ -0.23
NSRP1-208	ENST00000580103	LGR6	Q9HBX8	967 aa		13.59	□□□□□ -0.23
NSRP1-208	ENST00000580103	AFDN	P55196	1824 aa	Known RBP	13.59	□□□□□ -0.23
NSRP1-208	ENST00000580103	PTCD1	O75127	700 aa	Known RBP	13.58	□□□□□ -0.24
NSRP1-208	ENST00000580103	CRKL	P46109	303 aa	Known RBP	13.58	□□□□□ -0.24
NSRP1-208	ENST00000580103	AKAP4	Q5JQC9	854 aa		13.58	□□□□□ -0.24
NSRP1-208	ENST00000580103	C1orf141	Q5JVX7	400 aa		13.58	□□□□□ -0.24
NSRP1-208	ENST00000580103	INTS5	Q6P9B9	1019 aa	Known RBP	13.58	□□□□□ -0.24
NSRP1-208	ENST00000580103	WWC3	Q9ULE0	1092 aa		13.58	□□□□□ -0.24
NSRP1-208	ENST00000580103	COL3A1	P02461	1466 aa	Predicted RBP	13.58	□□□□□ -0.24
NSRP1-208	ENST00000580103	KCP	Q6ZWJ8	1503 aa		13.58	□□□□□ -0.24
NSRP1-208	ENST00000580103	SIPA1L3	O60292	1781 aa	Predicted RBP	13.58	□□□□□ -0.24
NSRP1-208	ENST00000580103	SBF1	O95248	1867 aa		13.57	□□□□□ -0.24
NSRP1-208	ENST00000580103	KCNA3	P22001	575 aa		13.57	□□□□□ -0.24
NSRP1-208	ENST00000580103	TGFB2	P61812	414 aa		13.57	□□□□□ -0.24
NSRP1-208	ENST00000580103	NRXN2	Q9P2S2	1712 aa		13.56	□□□□□ -0.24
NSRP1-208	ENST00000580103	SLC52A2	Q9HAB3	445 aa		13.56	□□□□□ -0.24
NSRP1-208	ENST00000580103	SRP68	Q9UHB9	627 aa	Known RBP	13.56	□□□□□ -0.24
NSRP1-208	ENST00000580103		A0A0G2JLW4	131 aa		13.55	□□□□□ -0.24
NSRP1-208	ENST00000580103	RNMT	O43148	476 aa	Known RBP	13.55	□□□□□ -0.24
NSRP1-208	ENST00000580103	RFC4	P35249	363 aa		13.55	□□□□□ -0.24
NSRP1-208	ENST00000580103	CHRDL2	Q6WN34	429 aa		13.55	□□□□□ -0.24
NSRP1-208	ENST00000580103	USP42	Q9H9J4	1324 aa	Known RBP	13.55	□□□□□ -0.24
NSRP1-208	ENST00000580103	NPC1L1	Q9UHC9	1359 aa		13.55	□□□□□ -0.24
NSRP1-208	ENST00000580103	HMOX1	P09601	288 aa		13.54	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms