RNA–Protein interactions for RNA: ENST00000579658.5

CDH19-204, Transcript of cadherin 19, humanhuman

TSL 1 (best)

Gene CDH19, Length 2,588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-204ENST00000579658 TRAK1Q9UPV9 953 aa4.83□□□□□ -1.64
CDH19-204ENST00000579658 KIAA1551Q9HCM1 1747 aa4.83□□□□□ -1.64
CDH19-204ENST00000579658 NLRP6P59044 892 aa4.82□□□□□ -1.64
CDH19-204ENST00000579658 TGFB2P61812 414 aa4.82□□□□□ -1.64
CDH19-204ENST00000579658 DCAF11Q8TEB1 546 aa4.82□□□□□ -1.64
CDH19-204ENST00000579658 BRCA1P38398 1863 aaKnown RBP4.82□□□□□ -1.64
CDH19-204ENST00000579658 RGS19P49795 217 aa4.82□□□□□ -1.64
CDH19-204ENST00000579658 ZNF692Q9BU19 519 aaPredicted RBP4.82□□□□□ -1.64
CDH19-204ENST00000579658 CTCFP49711 727 aaPredicted RBP4.81□□□□□ -1.64
CDH19-204ENST00000579658 COL23A1Q86Y22 540 aaPredicted RBP4.81□□□□□ -1.64
CDH19-204ENST00000579658 L3MBTL2Q969R5 705 aa4.81□□□□□ -1.64
CDH19-204ENST00000579658 AIDAQ96BJ3 306 aa4.81□□□□□ -1.64
CDH19-204ENST00000579658 ACSBG1Q96GR2 724 aa4.81□□□□□ -1.64
CDH19-204ENST00000579658 CCNL1Q9UK58 526 aaPredicted RBP4.81□□□□□ -1.64
CDH19-204ENST00000579658 C4BP0C0L5 1744 aa4.81□□□□□ -1.64
CDH19-204ENST00000579658 LTN1O94822 1766 aa4.81□□□□□ -1.64
CDH19-204ENST00000579658 UBR3Q6ZT12 1888 aa4.81□□□□□ -1.64
CDH19-204ENST00000579658 MLLT1Q03111 559 aaPredicted RBP4.81□□□□□ -1.64
CDH19-204ENST00000579658 USP47Q96K76 1375 aa4.81□□□□□ -1.64
CDH19-204ENST00000579658 KAT6BQ8WYB5 2073 aa4.8□□□□□ -1.64
CDH19-204ENST00000579658 ZBTB12Q9Y330 459 aaPredicted RBP4.8□□□□□ -1.64
CDH19-204ENST00000579658 CGNL1Q0VF96 1302 aa4.8□□□□□ -1.64
CDH19-204ENST00000579658 MON2Q7Z3U7 1717 aa4.8□□□□□ -1.64
CDH19-204ENST00000579658 ZBTB7CA1YPR0 619 aa4.8□□□□□ -1.64
CDH19-204ENST00000579658 NSD2O96028 1365 aa4.8□□□□□ -1.64
CDH19-204ENST00000579658 ERBB3P21860 1342 aa4.8□□□□□ -1.64
CDH19-204ENST00000579658 SSFA2P28290 1259 aa4.8□□□□□ -1.64
CDH19-204ENST00000579658 NBPF1Q3BBV0 1214 aa4.8□□□□□ -1.64
CDH19-204ENST00000579658 ZNF831Q5JPB2 1677 aa4.8□□□□□ -1.64
CDH19-204ENST00000579658 USP31Q70CQ4 1352 aa4.8□□□□□ -1.64
CDH19-204ENST00000579658 CCER1Q8TC90 406 aaPredicted RBP4.8□□□□□ -1.64
CDH19-204ENST00000579658 NMRK2Q9NPI5 230 aa4.8□□□□□ -1.64
CDH19-204ENST00000579658 TOGARAM1Q9Y4F4 1720 aa4.79□□□□□ -1.64
CDH19-204ENST00000579658 SMARCC1Q92922 1105 aaPredicted RBP4.79□□□□□ -1.64
CDH19-204ENST00000579658 AXIN2Q9Y2T1 843 aa4.79□□□□□ -1.64
CDH19-204ENST00000579658 VIRMAQ69YN4 1812 aaKnown RBP4.79□□□□□ -1.64
CDH19-204ENST00000579658 SCUBE2Q9NQ36 999 aa4.79□□□□□ -1.64
CDH19-204ENST00000579658 CREBZFQ9NS37 354 aa4.79□□□□□ -1.64
CDH19-204ENST00000579658 KCPQ6ZWJ8 1503 aa4.79□□□□□ -1.64
CDH19-204ENST00000579658 C4AP0C0L4 1744 aa4.78□□□□□ -1.64
CDH19-204ENST00000579658 POTEB2H3BUK9 544 aa4.78□□□□□ -1.64
CDH19-204ENST00000579658 SBF1O95248 1867 aa4.78□□□□□ -1.64
CDH19-204ENST00000579658 N4BP2Q86UW6 1770 aaPredicted RBP4.78□□□□□ -1.64
CDH19-204ENST00000579658 SRPK2P78362 688 aaKnown RBP4.78□□□□□ -1.64
CDH19-204ENST00000579658 FAM161AQ3B820 660 aa4.78□□□□□ -1.64
CDH19-204ENST00000579658 AK7Q96M32 723 aa4.78□□□□□ -1.64
CDH19-204ENST00000579658 NLRP2Q9NX02 1062 aa4.78□□□□□ -1.64
CDH19-204ENST00000579658 SMG6Q86US8 1419 aaKnown RBP4.78□□□□□ -1.64
CDH19-204ENST00000579658 TTC21BQ7Z4L5 1316 aa4.77□□□□□ -1.65
CDH19-204ENST00000579658 GTPBP6O43824 516 aaPredicted RBP4.77□□□□□ -1.65
CDH19-204ENST00000579658 VEGFAP15692 232 aaPredicted RBP4.77□□□□□ -1.65
CDH19-204ENST00000579658 C9orf131Q5VYM1 1079 aa4.77□□□□□ -1.65
CDH19-204ENST00000579658 MSL1Q68DK7 614 aa4.77□□□□□ -1.65
CDH19-204ENST00000579658 ARHGAP27Q6ZUM4 889 aa4.77□□□□□ -1.65
CDH19-204ENST00000579658 ABHD8Q96I13 439 aa4.77□□□□□ -1.65
CDH19-204ENST00000579658 CCDC87Q9NVE4 849 aa4.77□□□□□ -1.65
CDH19-204ENST00000579658 TIAM2Q8IVF5 1701 aa4.77□□□□□ -1.65
CDH19-204ENST00000579658 KDM6AO15550 1401 aaPredicted RBP4.77□□□□□ -1.65
CDH19-204ENST00000579658 THSD7BQ9C0I4 1608 aa4.77□□□□□ -1.65
CDH19-204ENST00000579658 RNF25Q96BH1 459 aaPredicted RBP4.77□□□□□ -1.65
CDH19-204ENST00000579658 CNTNAP1P78357 1384 aa4.77□□□□□ -1.65
CDH19-204ENST00000579658 CENPJQ9HC77 1338 aaPredicted RBP4.76□□□□□ -1.65
CDH19-204ENST00000579658 PRIM1P49642 420 aaKnown RBP4.76□□□□□ -1.65
CDH19-204ENST00000579658 ANKRD24Q8TF21 1146 aa4.76□□□□□ -1.65
CDH19-204ENST00000579658 TONSLQ96HA7 1378 aa4.76□□□□□ -1.65
CDH19-204ENST00000579658 EVC2Q86UK5 1308 aa4.76□□□□□ -1.65
CDH19-204ENST00000579658 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.76□□□□□ -1.65
CDH19-204ENST00000579658 NLGN1Q8N2Q7 840 aa4.76□□□□□ -1.65
CDH19-204ENST00000579658 DCAF5Q96JK2 942 aa4.76□□□□□ -1.65
CDH19-204ENST00000579658 C1orf115Q9H7X2 142 aa4.76□□□□□ -1.65
CDH19-204ENST00000579658 RRAGCQ9HB90 399 aa4.76□□□□□ -1.65
CDH19-204ENST00000579658 BCS1LQ9Y276 419 aa4.76□□□□□ -1.65
CDH19-204ENST00000579658 PALLDQ8WX93 1383 aa4.76□□□□□ -1.65
CDH19-204ENST00000579658 DLEC1Q9Y238 1755 aa4.76□□□□□ -1.65
CDH19-204ENST00000579658 FOXN1O15353 648 aa4.75□□□□□ -1.65
CDH19-204ENST00000579658 FCHSD2O94868 740 aa4.75□□□□□ -1.65
CDH19-204ENST00000579658 HS6ST3Q8IZP7 471 aa4.75□□□□□ -1.65
CDH19-204ENST00000579658 ZCRB1Q8TBF4 217 aaKnown RBP4.75□□□□□ -1.65
CDH19-204ENST00000579658 ITGB4P16144 1822 aa4.75□□□□□ -1.65
CDH19-204ENST00000579658 RTL1A6NKG5 1358 aa4.75□□□□□ -1.65
CDH19-204ENST00000579658 MAP2P11137 1827 aaKnown RBP4.75□□□□□ -1.65
CDH19-204ENST00000579658 DICER1Q9UPY3 1922 aaKnown RBP4.75□□□□□ -1.65
CDH19-204ENST00000579658 HTRA3P83110 453 aa4.75□□□□□ -1.65
CDH19-204ENST00000579658 MAP2K1Q02750 393 aaPredicted RBP4.75□□□□□ -1.65
CDH19-204ENST00000579658 SYTL4Q96C24 671 aaPredicted RBP4.75□□□□□ -1.65
CDH19-204ENST00000579658 RNF181Q9P0P0 153 aa4.75□□□□□ -1.65
CDH19-204ENST00000579658 PIM2Q9P1W9 311 aa4.75□□□□□ -1.65
CDH19-204ENST00000579658 GLTPD2A6NH11 291 aa4.74□□□□□ -1.65
CDH19-204ENST00000579658 DALRD3Q5D0E6 543 aaKnown RBP4.74□□□□□ -1.65
CDH19-204ENST00000579658 DDX54Q8TDD1 881 aaKnown RBP4.74□□□□□ -1.65
CDH19-204ENST00000579658 GCC1Q96CN9 775 aa4.74□□□□□ -1.65
CDH19-204ENST00000579658 CABP1Q9NZU7 370 aa4.74□□□□□ -1.65
CDH19-204ENST00000579658 KTN1Q86UP2 1357 aaKnown RBP4.74□□□□□ -1.65
CDH19-204ENST00000579658 CD163L1Q9NR16 1453 aa4.74□□□□□ -1.65
CDH19-204ENST00000579658 MAP3K19Q56UN5 1328 aa4.74□□□□□ -1.65
CDH19-204ENST00000579658 PCDH11XQ9BZA7 1347 aa4.74□□□□□ -1.65
CDH19-204ENST00000579658 PCDH11YQ9BZA8 1340 aa4.74□□□□□ -1.65
CDH19-204ENST00000579658 SCN4AP35499 1836 aa4.74□□□□□ -1.65
CDH19-204ENST00000579658 DIEXFQ68CQ4 756 aaKnown RBP4.74□□□□□ -1.65
CDH19-204ENST00000579658 CHADLQ6NUI6 762 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms