RNA–Protein interactions for RNA: ENST00000579563.1

PHF12-208, Transcript of PHD finger protein 12, human

TSL 4

Gene PHF12, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHF12-208	ENST00000579563	STK31	Q9BXU1	1019 aa		13.23	□□□□□ -0.29
PHF12-208	ENST00000579563	SMC4	Q9NTJ3	1288 aa		13.23	□□□□□ -0.29
PHF12-208	ENST00000579563	ALDH1L2	Q3SY69	923 aa		13.22	□□□□□ -0.29
PHF12-208	ENST00000579563	SYTL4	Q96C24	671 aa	Predicted RBP	13.22	□□□□□ -0.29
PHF12-208	ENST00000579563	TNS2	Q63HR2	1409 aa		13.22	□□□□□ -0.29
PHF12-208	ENST00000579563	RBM6	P78332	1123 aa	Known RBP	13.21	□□□□□ -0.29
PHF12-208	ENST00000579563	CCDC30	Q5VVM6	783 aa		13.21	□□□□□ -0.29
PHF12-208	ENST00000579563	NRAP	Q86VF7	1730 aa		13.21	□□□□□ -0.3
PHF12-208	ENST00000579563	ATRN	O75882	1429 aa		13.21	□□□□□ -0.3
PHF12-208	ENST00000579563	HOXB7	P09629	217 aa		13.2	□□□□□ -0.3
PHF12-208	ENST00000579563	RARS	P54136	660 aa	Known RBP	13.2	□□□□□ -0.3
PHF12-208	ENST00000579563	RRP1	P56182	461 aa	Known RBP	13.2	□□□□□ -0.3
PHF12-208	ENST00000579563	ZNF790	Q6PG37	636 aa		13.2	□□□□□ -0.3
PHF12-208	ENST00000579563	SEPT12	Q8IYM1	358 aa		13.2	□□□□□ -0.3
PHF12-208	ENST00000579563	FRAT1	Q92837	279 aa	Predicted RBP	13.2	□□□□□ -0.3
PHF12-208	ENST00000579563	FMNL2	Q96PY5	1086 aa		13.2	□□□□□ -0.3
PHF12-208	ENST00000579563	KIF16B	Q96L93	1317 aa		13.19	□□□□□ -0.3
PHF12-208	ENST00000579563	VAMP4	O75379	141 aa		13.19	□□□□□ -0.3
PHF12-208	ENST00000579563	RXRB	P28702	533 aa		13.19	□□□□□ -0.3
PHF12-208	ENST00000579563	C8orf58	Q8NAV2	365 aa		13.19	□□□□□ -0.3
PHF12-208	ENST00000579563	PKD1L3	Q7Z443	1732 aa		13.19	□□□□□ -0.3
PHF12-208	ENST00000579563	EIF4A1	P60842	406 aa	Known RBP	13.18	□□□□□ -0.3
PHF12-208	ENST00000579563	KDM6A	O15550	1401 aa	Predicted RBP	13.18	□□□□□ -0.3
PHF12-208	ENST00000579563	DLG5	Q8TDM6	1919 aa		13.17	□□□□□ -0.3
PHF12-208	ENST00000579563	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	13.17	□□□□□ -0.3
PHF12-208	ENST00000579563	ONECUT3	O60422	494 aa	Predicted RBP	13.17	□□□□□ -0.3
PHF12-208	ENST00000579563	SNRPA1	P09661	255 aa	Known RBP	13.17	□□□□□ -0.3
PHF12-208	ENST00000579563	PRIM1	P49642	420 aa	Known RBP	13.17	□□□□□ -0.3
PHF12-208	ENST00000579563	HDGFL1	Q5TGJ6	251 aa		13.17	□□□□□ -0.3
PHF12-208	ENST00000579563	ZKSCAN2	Q63HK3	967 aa		13.17	□□□□□ -0.3
PHF12-208	ENST00000579563	MARCH10	Q8NA82	808 aa	Predicted RBP	13.17	□□□□□ -0.3
PHF12-208	ENST00000579563	SMARCC1	Q92922	1105 aa	Predicted RBP	13.17	□□□□□ -0.3
PHF12-208	ENST00000579563	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.17	□□□□□ -0.3
PHF12-208	ENST00000579563	BCAR3	O75815	825 aa		13.16	□□□□□ -0.3
PHF12-208	ENST00000579563	EIF2S2	P20042	333 aa	Known RBP	13.16	□□□□□ -0.3
PHF12-208	ENST00000579563	SLC39A6	Q13433	755 aa		13.16	□□□□□ -0.3
PHF12-208	ENST00000579563	FKBP8	Q14318	412 aa		13.16	□□□□□ -0.3
PHF12-208	ENST00000579563	ERICH6B	Q5W0A0	696 aa		13.16	□□□□□ -0.3
PHF12-208	ENST00000579563	FTSJ3	Q8IY81	847 aa	Known RBP	13.16	□□□□□ -0.3
PHF12-208	ENST00000579563	TSPYL6	Q8N831	410 aa		13.16	□□□□□ -0.3
PHF12-208	ENST00000579563	SSH1	Q8WYL5	1049 aa		13.16	□□□□□ -0.3
PHF12-208	ENST00000579563	BCL2L13	Q9BXK5	485 aa		13.16	□□□□□ -0.3
PHF12-208	ENST00000579563	KRT27	Q7Z3Y8	459 aa		13.15	□□□□□ -0.3
PHF12-208	ENST00000579563	NPM2	Q86SE8	214 aa	Known RBP	13.15	□□□□□ -0.3
PHF12-208	ENST00000579563	ACSBG1	Q96GR2	724 aa		13.15	□□□□□ -0.3
PHF12-208	ENST00000579563	RBM42	Q9BTD8	480 aa	Known RBP	13.15	□□□□□ -0.3
PHF12-208	ENST00000579563	API5	Q9BZZ5	524 aa	Known RBP	13.15	□□□□□ -0.3
PHF12-208	ENST00000579563	GTF3C3	Q9Y5Q9	886 aa		13.15	□□□□□ -0.3
PHF12-208	ENST00000579563	SLC4A2	P04920	1241 aa		13.14	□□□□□ -0.31
PHF12-208	ENST00000579563	HMGB2	P26583	209 aa	Known RBP	13.14	□□□□□ -0.31
PHF12-208	ENST00000579563	PIGB	Q92521	554 aa		13.14	□□□□□ -0.31
PHF12-208	ENST00000579563	CHMP4B	Q9H444	224 aa	Known RBP	13.14	□□□□□ -0.31
PHF12-208	ENST00000579563	KCNQ3	O43525	872 aa		13.13	□□□□□ -0.31
PHF12-208	ENST00000579563	PTCD1	O75127	700 aa	Known RBP	13.13	□□□□□ -0.31
PHF12-208	ENST00000579563	GIGYF1	O75420	1035 aa	Predicted RBP	13.13	□□□□□ -0.31
PHF12-208	ENST00000579563	PDE3A	Q14432	1141 aa		13.13	□□□□□ -0.31
PHF12-208	ENST00000579563	KRT24	Q2M2I5	525 aa		13.13	□□□□□ -0.31
PHF12-208	ENST00000579563	FAM196A	Q6ZSG2	479 aa		13.13	□□□□□ -0.31
PHF12-208	ENST00000579563	MRPL50	Q8N5N7	158 aa	Known RBP	13.13	□□□□□ -0.31
PHF12-208	ENST00000579563	ARHGAP45	Q92619	1136 aa		13.13	□□□□□ -0.31
PHF12-208	ENST00000579563	DBF4	Q9UBU7	674 aa	Predicted RBP	13.13	□□□□□ -0.31
PHF12-208	ENST00000579563	NOB1	Q9ULX3	412 aa	Known RBP	13.13	□□□□□ -0.31
PHF12-208	ENST00000579563	LRRC37A3	O60309	1634 aa		13.13	□□□□□ -0.31
PHF12-208	ENST00000579563	RNF123	Q5XPI4	1314 aa		13.13	□□□□□ -0.31
PHF12-208	ENST00000579563	MRC1	P22897	1456 aa		13.12	□□□□□ -0.31
PHF12-208	ENST00000579563	TCERG1	O14776	1098 aa	Known RBP	13.12	□□□□□ -0.31
PHF12-208	ENST00000579563	PLIN1	O60240	522 aa		13.12	□□□□□ -0.31
PHF12-208	ENST00000579563	STARD3NL	O95772	234 aa		13.12	□□□□□ -0.31
PHF12-208	ENST00000579563	BRPF1	P55201	1214 aa	Predicted RBP	13.12	□□□□□ -0.31
PHF12-208	ENST00000579563	VSIG10	Q8N0Z9	540 aa		13.12	□□□□□ -0.31
PHF12-208	ENST00000579563	NECTIN2	Q92692	538 aa		13.12	□□□□□ -0.31
PHF12-208	ENST00000579563	ZNF496	Q96IT1	587 aa	Predicted RBP	13.12	□□□□□ -0.31
PHF12-208	ENST00000579563	DDX58	O95786	925 aa	Known RBP	13.11	□□□□□ -0.31
PHF12-208	ENST00000579563	IRX6	P78412	446 aa	Predicted RBP	13.11	□□□□□ -0.31
PHF12-208	ENST00000579563	ATF7IP	Q6VMQ6	1270 aa		13.11	□□□□□ -0.31
PHF12-208	ENST00000579563	DZIP1L	Q8IYY4	767 aa	Known RBP	13.11	□□□□□ -0.31
PHF12-208	ENST00000579563	HYPK	Q9NX55	129 aa		13.11	□□□□□ -0.31
PHF12-208	ENST00000579563	PTPRC	P08575	1304 aa		13.11	□□□□□ -0.31
PHF12-208	ENST00000579563	ATG3	Q9NT62	314 aa		13.1	□□□□□ -0.31
PHF12-208	ENST00000579563	BCL9	O00512	1426 aa		13.1	□□□□□ -0.31
PHF12-208	ENST00000579563	GLI3	P10071	1580 aa		13.1	□□□□□ -0.31
PHF12-208	ENST00000579563	SCN11A	Q9UI33	1791 aa		13.09	□□□□□ -0.31
PHF12-208	ENST00000579563	HEG1	Q9ULI3	1381 aa		13.09	□□□□□ -0.31
PHF12-208	ENST00000579563	ADAMTS7	Q9UKP4	1686 aa		13.09	□□□□□ -0.31
PHF12-208	ENST00000579563	FKBP5	Q13451	457 aa	Predicted RBP	13.09	□□□□□ -0.31
PHF12-208	ENST00000579563	ASAP1	Q9ULH1	1129 aa		13.09	□□□□□ -0.31
PHF12-208	ENST00000579563	ERBB4	Q15303	1308 aa		13.09	□□□□□ -0.31
PHF12-208	ENST00000579563	WNK3	Q9BYP7	1800 aa		13.09	□□□□□ -0.31
PHF12-208	ENST00000579563	AAMP	Q13685	434 aa		13.08	□□□□□ -0.32
PHF12-208	ENST00000579563	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.08	□□□□□ -0.32
PHF12-208	ENST00000579563	CHPF2	Q9P2E5	772 aa		13.08	□□□□□ -0.32
PHF12-208	ENST00000579563	ATP6V1A	P38606	617 aa		13.07	□□□□□ -0.32
PHF12-208	ENST00000579563	FLII	Q13045	1269 aa		13.07	□□□□□ -0.32
PHF12-208	ENST00000579563	ITPRIP	Q8IWB1	547 aa		13.07	□□□□□ -0.32
PHF12-208	ENST00000579563	CLUAP1	Q96AJ1	413 aa		13.07	□□□□□ -0.32
PHF12-208	ENST00000579563	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.07	□□□□□ -0.32
PHF12-208	ENST00000579563	THSD7A	Q9UPZ6	1657 aa		13.06	□□□□□ -0.32
PHF12-208	ENST00000579563	MYL6B	P14649	208 aa		13.06	□□□□□ -0.32
PHF12-208	ENST00000579563	ILDR1	Q86SU0	546 aa	Predicted RBP	13.06	□□□□□ -0.32
PHF12-208	ENST00000579563	DDX19B	Q9UMR2	479 aa		13.06	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms