RNA–Protein interactions for RNA: ENST00000579449.1

TSEN54-206, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-206ENST00000579449 BABAM1Q9NWV8 329 aa17.99■□□□□ 0.47
TSEN54-206ENST00000579449 MRC1P22897 1456 aa17.99■□□□□ 0.47
TSEN54-206ENST00000579449 KDM3BQ7LBC6 1761 aa17.98■□□□□ 0.47
TSEN54-206ENST00000579449 ERVV-2B6SEH9 535 aa17.97■□□□□ 0.47
TSEN54-206ENST00000579449 ONECUT3O60422 494 aaPredicted RBP17.97■□□□□ 0.47
TSEN54-206ENST00000579449 MARCH10Q8NA82 808 aaPredicted RBP17.97■□□□□ 0.47
TSEN54-206ENST00000579449 ITGB4P16144 1822 aa17.96■□□□□ 0.47
TSEN54-206ENST00000579449 BTBD11A6QL63 1104 aa17.96■□□□□ 0.47
TSEN54-206ENST00000579449 CABP4P57796 275 aa17.96■□□□□ 0.47
TSEN54-206ENST00000579449 NFATC2IPQ8NCF5 419 aa17.96■□□□□ 0.47
TSEN54-206ENST00000579449 RCAN3Q9UKA8 241 aa17.96■□□□□ 0.47
TSEN54-206ENST00000579449 SEPT12Q8IYM1 358 aa17.94■□□□□ 0.46
TSEN54-206ENST00000579449 C8orf58Q8NAV2 365 aa17.94■□□□□ 0.46
TSEN54-206ENST00000579449 DOT1LQ8TEK3 1739 aa17.94■□□□□ 0.46
TSEN54-206ENST00000579449 KCNQ3O43525 872 aa17.93■□□□□ 0.46
TSEN54-206ENST00000579449 CT47B1P0C2W7 299 aaPredicted RBP17.93■□□□□ 0.46
TSEN54-206ENST00000579449 RBM6P78332 1123 aaKnown RBP17.93■□□□□ 0.46
TSEN54-206ENST00000579449 TSPYL6Q8N831 410 aa17.93■□□□□ 0.46
TSEN54-206ENST00000579449 RGS17Q9UGC6 210 aaPredicted RBP17.93■□□□□ 0.46
TSEN54-206ENST00000579449 KRT24Q2M2I5 525 aa17.92■□□□□ 0.46
TSEN54-206ENST00000579449 ILDR1Q86SU0 546 aaPredicted RBP17.92■□□□□ 0.46
TSEN54-206ENST00000579449 SUPT16HQ9Y5B9 1047 aaKnown RBP17.92■□□□□ 0.46
TSEN54-206ENST00000579449 BRWD3Q6RI45 1802 aa17.91■□□□□ 0.46
TSEN54-206ENST00000579449 ELL2O00472 640 aaPredicted RBP17.91■□□□□ 0.46
TSEN54-206ENST00000579449 EIF4A1P60842 406 aaKnown RBP17.91■□□□□ 0.46
TSEN54-206ENST00000579449 SLC39A6Q13433 755 aa17.91■□□□□ 0.46
TSEN54-206ENST00000579449 VAMP4O75379 141 aa17.9■□□□□ 0.46
TSEN54-206ENST00000579449 TWISTNBQ3B726 338 aaPredicted RBP17.9■□□□□ 0.46
TSEN54-206ENST00000579449 TMOD3Q9NYL9 352 aa17.9■□□□□ 0.46
TSEN54-206ENST00000579449 RARSP54136 660 aaKnown RBP17.89■□□□□ 0.45
TSEN54-206ENST00000579449 ZNF790Q6PG37 636 aa17.89■□□□□ 0.45
TSEN54-206ENST00000579449 PAPPAQ13219 1627 aa17.89■□□□□ 0.45
TSEN54-206ENST00000579449 RXRBP28702 533 aa17.88■□□□□ 0.45
TSEN54-206ENST00000579449 PRIM1P49642 420 aaKnown RBP17.88■□□□□ 0.45
TSEN54-206ENST00000579449 POTEAQ6S8J7 498 aa17.88■□□□□ 0.45
TSEN54-206ENST00000579449 PIGBQ92521 554 aa17.88■□□□□ 0.45
TSEN54-206ENST00000579449 ACSBG1Q96GR2 724 aa17.88■□□□□ 0.45
TSEN54-206ENST00000579449 SYTL4Q96C24 671 aaPredicted RBP17.87■□□□□ 0.45
TSEN54-206ENST00000579449 BCL9O00512 1426 aa17.87■□□□□ 0.45
TSEN54-206ENST00000579449 UBR2Q8IWV8 1755 aa17.86■□□□□ 0.45
TSEN54-206ENST00000579449 BCAR3O75815 825 aa17.86■□□□□ 0.45
TSEN54-206ENST00000579449 TTC5Q8N0Z6 440 aa17.86■□□□□ 0.45
TSEN54-206ENST00000579449 SOS1Q07889 1333 aaPredicted RBP17.85■□□□□ 0.45
TSEN54-206ENST00000579449 FAM182BQ5T319 152 aa17.85■□□□□ 0.45
TSEN54-206ENST00000579449 RNF123Q5XPI4 1314 aa17.85■□□□□ 0.45
TSEN54-206ENST00000579449 SBF2Q86WG5 1849 aa17.85■□□□□ 0.45
TSEN54-206ENST00000579449 ZNF428Q96B54 188 aa17.85■□□□□ 0.45
TSEN54-206ENST00000579449 HEG1Q9ULI3 1381 aa17.85■□□□□ 0.45
TSEN54-206ENST00000579449 ALDH1L2Q3SY69 923 aa17.84■□□□□ 0.45
TSEN54-206ENST00000579449 KRT27Q7Z3Y8 459 aa17.84■□□□□ 0.45
TSEN54-206ENST00000579449 SSH1Q8WYL5 1049 aa17.84■□□□□ 0.45
TSEN54-206ENST00000579449 ZNF496Q96IT1 587 aaPredicted RBP17.84■□□□□ 0.45
TSEN54-206ENST00000579449 BCL2L13Q9BXK5 485 aa17.84■□□□□ 0.45
TSEN54-206ENST00000579449 ASAP1Q9ULH1 1129 aa17.84■□□□□ 0.45
TSEN54-206ENST00000579449 KCPQ6ZWJ8 1503 aa17.83■□□□□ 0.45
TSEN54-206ENST00000579449 GIGYF1O75420 1035 aaPredicted RBP17.83■□□□□ 0.44
TSEN54-206ENST00000579449 HOXB7P09629 217 aa17.83■□□□□ 0.44
TSEN54-206ENST00000579449 RRP1P56182 461 aaKnown RBP17.83■□□□□ 0.44
TSEN54-206ENST00000579449 FMNL2Q96PY5 1086 aa17.83■□□□□ 0.44
TSEN54-206ENST00000579449 ATG3Q9NT62 314 aa17.83■□□□□ 0.44
TSEN54-206ENST00000579449 SMC4Q9NTJ3 1288 aa17.83■□□□□ 0.44
TSEN54-206ENST00000579449 C5P01031 1676 aa17.83■□□□□ 0.44
TSEN54-206ENST00000579449 TCERG1O14776 1098 aaKnown RBP17.82■□□□□ 0.44
TSEN54-206ENST00000579449 KCNQ2O43526 872 aa17.82■□□□□ 0.44
TSEN54-206ENST00000579449 NHSQ6T4R5 1651 aa17.82■□□□□ 0.44
TSEN54-206ENST00000579449 CACNA1FO60840 1977 aa17.82■□□□□ 0.44
TSEN54-206ENST00000579449 RGS12O14924 1447 aa17.81■□□□□ 0.44
TSEN54-206ENST00000579449 PRAMEF22A3QJZ6 481 aa17.8■□□□□ 0.44
TSEN54-206ENST00000579449 PLIN1O60240 522 aa17.8■□□□□ 0.44
TSEN54-206ENST00000579449 MRPL50Q8N5N7 158 aaKnown RBP17.8■□□□□ 0.44
TSEN54-206ENST00000579449 NECTIN2Q92692 538 aa17.8■□□□□ 0.44
TSEN54-206ENST00000579449 PTCD1O75127 700 aaKnown RBP17.79■□□□□ 0.44
TSEN54-206ENST00000579449 SNRPA1P09661 255 aaKnown RBP17.79■□□□□ 0.44
TSEN54-206ENST00000579449 EIF2S2P20042 333 aaKnown RBP17.79■□□□□ 0.44
TSEN54-206ENST00000579449 HDGFL1Q5TGJ6 251 aa17.79■□□□□ 0.44
TSEN54-206ENST00000579449 CCDC30Q5VVM6 783 aa17.79■□□□□ 0.44
TSEN54-206ENST00000579449 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.79■□□□□ 0.44
TSEN54-206ENST00000579449 BTAF1O14981 1849 aa17.79■□□□□ 0.44
TSEN54-206ENST00000579449 LAMB4A4D0S4 1761 aa17.79■□□□□ 0.44
TSEN54-206ENST00000579449 BRPF1P55201 1214 aaPredicted RBP17.78■□□□□ 0.44
TSEN54-206ENST00000579449 FAM196AQ6ZSG2 479 aa17.78■□□□□ 0.44
TSEN54-206ENST00000579449 PTF1AQ7RTS3 328 aa17.77■□□□□ 0.44
TSEN54-206ENST00000579449 FRAT1Q92837 279 aaPredicted RBP17.77■□□□□ 0.44
TSEN54-206ENST00000579449 RBM42Q9BTD8 480 aaKnown RBP17.77■□□□□ 0.44
TSEN54-206ENST00000579449 CHMP4AQ9BY43 222 aa17.77■□□□□ 0.44
TSEN54-206ENST00000579449 NEFLP07196 543 aa17.76■□□□□ 0.43
TSEN54-206ENST00000579449 IRX6P78412 446 aaPredicted RBP17.76■□□□□ 0.43
TSEN54-206ENST00000579449 STK31Q9BXU1 1019 aa17.76■□□□□ 0.43
TSEN54-206ENST00000579449 NOB1Q9ULX3 412 aaKnown RBP17.76■□□□□ 0.43
TSEN54-206ENST00000579449 USP16Q9Y5T5 823 aa17.76■□□□□ 0.43
TSEN54-206ENST00000579449 KIF16BQ96L93 1317 aa17.75■□□□□ 0.43
TSEN54-206ENST00000579449 SLC4A2P04920 1241 aa17.75■□□□□ 0.43
TSEN54-206ENST00000579449 CANXP27824 592 aaKnown RBP17.75■□□□□ 0.43
TSEN54-206ENST00000579449 PIAS4Q8N2W9 510 aaPredicted RBP17.75■□□□□ 0.43
TSEN54-206ENST00000579449 SMARCC1Q92922 1105 aaPredicted RBP17.75■□□□□ 0.43
TSEN54-206ENST00000579449 VSIG10Q8N0Z9 540 aa17.74■□□□□ 0.43
TSEN54-206ENST00000579449 SLC4A9Q96Q91 983 aa17.74■□□□□ 0.43
TSEN54-206ENST00000579449 PALLDQ8WX93 1383 aa17.74■□□□□ 0.43
TSEN54-206ENST00000579449 ZKSCAN2Q63HK3 967 aa17.73■□□□□ 0.43
TSEN54-206ENST00000579449 BCL11BQ9C0K0 894 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms