RNA–Protein interactions for RNA: ENST00000579148.1

MIR3940-201, Transcript of microRNA 3940, humanhuman

BASIC

Gene MIR3940, Length 102 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR3940-201ENST00000579148 DDX54Q8TDD1 881 aaKnown RBP17.85■□□□□ 0.45
MIR3940-201ENST00000579148 TRPC5Q9UL62 973 aaPredicted RBP17.85■□□□□ 0.45
MIR3940-201ENST00000579148 WNK3Q9BYP7 1800 aa17.84■□□□□ 0.45
MIR3940-201ENST00000579148 ATRNO75882 1429 aa17.84■□□□□ 0.45
MIR3940-201ENST00000579148 HOXB7P09629 217 aa17.84■□□□□ 0.45
MIR3940-201ENST00000579148 CABP4P57796 275 aa17.84■□□□□ 0.45
MIR3940-201ENST00000579148 MIS18AQ9NYP9 233 aa17.84■□□□□ 0.45
MIR3940-201ENST00000579148 GTF3C3Q9Y5Q9 886 aa17.84■□□□□ 0.45
MIR3940-201ENST00000579148 SHANK3Q9BYB0 1731 aa17.82■□□□□ 0.44
MIR3940-201ENST00000579148 EIF4A1P60842 406 aaKnown RBP17.82■□□□□ 0.44
MIR3940-201ENST00000579148 GJD4Q96KN9 370 aaPredicted RBP17.82■□□□□ 0.44
MIR3940-201ENST00000579148 SCN11AQ9UI33 1791 aa17.81■□□□□ 0.44
MIR3940-201ENST00000579148 BCAR3O75815 825 aa17.81■□□□□ 0.44
MIR3940-201ENST00000579148 TSPYL6Q8N831 410 aa17.81■□□□□ 0.44
MIR3940-201ENST00000579148 NFATC2IPQ8NCF5 419 aa17.81■□□□□ 0.44
MIR3940-201ENST00000579148 SMC4Q9NTJ3 1288 aa17.81■□□□□ 0.44
MIR3940-201ENST00000579148 KIF16BQ96L93 1317 aa17.8■□□□□ 0.44
MIR3940-201ENST00000579148 SSH1Q8WYL5 1049 aa17.8■□□□□ 0.44
MIR3940-201ENST00000579148 KDM3BQ7LBC6 1761 aa17.79■□□□□ 0.44
MIR3940-201ENST00000579148 ONECUT3O60422 494 aaPredicted RBP17.79■□□□□ 0.44
MIR3940-201ENST00000579148 MS4A1P11836 297 aa17.79■□□□□ 0.44
MIR3940-201ENST00000579148 FKBP8Q14318 412 aa17.79■□□□□ 0.44
MIR3940-201ENST00000579148 FAM98CQ17RN3 349 aaKnown RBP17.79■□□□□ 0.44
MIR3940-201ENST00000579148 ZNF790Q6PG37 636 aa17.79■□□□□ 0.44
MIR3940-201ENST00000579148 SIPA1L3O60292 1781 aaPredicted RBP17.79■□□□□ 0.44
MIR3940-201ENST00000579148 HEG1Q9ULI3 1381 aa17.79■□□□□ 0.44
MIR3940-201ENST00000579148 ELL2O00472 640 aaPredicted RBP17.78■□□□□ 0.44
MIR3940-201ENST00000579148 IPO8O15397 1037 aaKnown RBP17.78■□□□□ 0.44
MIR3940-201ENST00000579148 PDE3AQ14432 1141 aa17.78■□□□□ 0.44
MIR3940-201ENST00000579148 ZNF772Q68DY9 489 aaPredicted RBP17.78■□□□□ 0.44
MIR3940-201ENST00000579148 TTC5Q8N0Z6 440 aa17.78■□□□□ 0.44
MIR3940-201ENST00000579148 CANXP27824 592 aaKnown RBP17.77■□□□□ 0.44
MIR3940-201ENST00000579148 TMOD3Q9NYL9 352 aa17.77■□□□□ 0.44
MIR3940-201ENST00000579148 KRT24Q2M2I5 525 aa17.76■□□□□ 0.43
MIR3940-201ENST00000579148 CCDC30Q5VVM6 783 aa17.76■□□□□ 0.43
MIR3940-201ENST00000579148 ZKSCAN2Q63HK3 967 aa17.76■□□□□ 0.43
MIR3940-201ENST00000579148 MRPL50Q8N5N7 158 aaKnown RBP17.76■□□□□ 0.43
MIR3940-201ENST00000579148 ARHGAP45Q92619 1136 aa17.76■□□□□ 0.43
MIR3940-201ENST00000579148 QTRT2Q9H974 415 aaKnown RBP17.76■□□□□ 0.43
MIR3940-201ENST00000579148 THSD7AQ9UPZ6 1657 aa17.76■□□□□ 0.43
MIR3940-201ENST00000579148 GLI3P10071 1580 aa17.75■□□□□ 0.43
MIR3940-201ENST00000579148 MARCH10Q8NA82 808 aaPredicted RBP17.75■□□□□ 0.43
MIR3940-201ENST00000579148 FMNL2Q96PY5 1086 aa17.75■□□□□ 0.43
MIR3940-201ENST00000579148 KCNQ3O43525 872 aa17.74■□□□□ 0.43
MIR3940-201ENST00000579148 PLIN1O60240 522 aa17.74■□□□□ 0.43
MIR3940-201ENST00000579148 GIGYF1O75420 1035 aaPredicted RBP17.74■□□□□ 0.43
MIR3940-201ENST00000579148 BCL2L13Q9BXK5 485 aa17.74■□□□□ 0.43
MIR3940-201ENST00000579148 STK31Q9BXU1 1019 aa17.74■□□□□ 0.43
MIR3940-201ENST00000579148 BCL9O00512 1426 aa17.73■□□□□ 0.43
MIR3940-201ENST00000579148 FRAT1Q92837 279 aaPredicted RBP17.73■□□□□ 0.43
MIR3940-201ENST00000579148 HDGFL1Q5TGJ6 251 aa17.72■□□□□ 0.43
MIR3940-201ENST00000579148 ATF7IPQ6VMQ6 1270 aa17.72■□□□□ 0.43
MIR3940-201ENST00000579148 PTPRCP08575 1304 aa17.72■□□□□ 0.43
MIR3940-201ENST00000579148 A0A0G2JS52 829 aa17.71■□□□□ 0.43
MIR3940-201ENST00000579148 SNRPA1P09661 255 aaKnown RBP17.71■□□□□ 0.43
MIR3940-201ENST00000579148 MYT1Q01538 1121 aa17.71■□□□□ 0.43
MIR3940-201ENST00000579148 SLC39A6Q13433 755 aa17.71■□□□□ 0.43
MIR3940-201ENST00000579148 PIGBQ92521 554 aa17.71■□□□□ 0.43
MIR3940-201ENST00000579148 NOB1Q9ULX3 412 aaKnown RBP17.71■□□□□ 0.43
MIR3940-201ENST00000579148 VIRMAQ69YN4 1812 aaKnown RBP17.7■□□□□ 0.42
MIR3940-201ENST00000579148 TOGARAM1Q9Y4F4 1720 aa17.7■□□□□ 0.42
MIR3940-201ENST00000579148 IRX6P78412 446 aaPredicted RBP17.7■□□□□ 0.42
MIR3940-201ENST00000579148 ZNF496Q96IT1 587 aaPredicted RBP17.7■□□□□ 0.42
MIR3940-201ENST00000579148 API5Q9BZZ5 524 aaKnown RBP17.7■□□□□ 0.42
MIR3940-201ENST00000579148 PAPPAQ13219 1627 aa17.69■□□□□ 0.42
MIR3940-201ENST00000579148 SLC4A2P04920 1241 aa17.69■□□□□ 0.42
MIR3940-201ENST00000579148 RBM6P78332 1123 aaKnown RBP17.69■□□□□ 0.42
MIR3940-201ENST00000579148 AAMPQ13685 434 aa17.69■□□□□ 0.42
MIR3940-201ENST00000579148 SEPT12Q8IYM1 358 aa17.69■□□□□ 0.42
MIR3940-201ENST00000579148 VSIG10Q8N0Z9 540 aa17.69■□□□□ 0.42
MIR3940-201ENST00000579148 TRIM27P14373 513 aa17.68■□□□□ 0.42
MIR3940-201ENST00000579148 PRIM1P49642 420 aaKnown RBP17.68■□□□□ 0.42
MIR3940-201ENST00000579148 FTSJ3Q8IY81 847 aaKnown RBP17.68■□□□□ 0.42
MIR3940-201ENST00000579148 DZIP1LQ8IYY4 767 aaKnown RBP17.68■□□□□ 0.42
MIR3940-201ENST00000579148 DBF4Q9UBU7 674 aaPredicted RBP17.68■□□□□ 0.42
MIR3940-201ENST00000579148 KCPQ6ZWJ8 1503 aa17.67■□□□□ 0.42
MIR3940-201ENST00000579148 C20orf194Q5TEA3 1177 aa17.67■□□□□ 0.42
MIR3940-201ENST00000579148 TEX13AQ9BXU3 409 aaPredicted RBP17.67■□□□□ 0.42
MIR3940-201ENST00000579148 ATG3Q9NT62 314 aa17.67■□□□□ 0.42
MIR3940-201ENST00000579148 ERBB4Q15303 1308 aa17.67■□□□□ 0.42
MIR3940-201ENST00000579148 PPP4R2Q9NY27 417 aa17.66■□□□□ 0.42
MIR3940-201ENST00000579148 TCERG1O14776 1098 aaKnown RBP17.65■□□□□ 0.42
MIR3940-201ENST00000579148 EIF2S2P20042 333 aaKnown RBP17.65■□□□□ 0.42
MIR3940-201ENST00000579148 SMARCC1Q92922 1105 aaPredicted RBP17.65■□□□□ 0.42
MIR3940-201ENST00000579148 SYTL4Q96C24 671 aaPredicted RBP17.65■□□□□ 0.42
MIR3940-201ENST00000579148 CRBNQ96SW2 442 aa17.65■□□□□ 0.42
MIR3940-201ENST00000579148 UBR2Q8IWV8 1755 aa17.64■□□□□ 0.41
MIR3940-201ENST00000579148 EXOC6Q8TAG9 804 aa17.64■□□□□ 0.41
MIR3940-201ENST00000579148 PANK1Q8TE04 598 aa17.64■□□□□ 0.41
MIR3940-201ENST00000579148 CHMP4BQ9H444 224 aaKnown RBP17.64■□□□□ 0.41
MIR3940-201ENST00000579148 DDX21Q9NR30 783 aaKnown RBP eCLIP17.64■□□□□ 0.41
MIR3940-201ENST00000579148 HYPKQ9NX55 129 aa17.64■□□□□ 0.41
MIR3940-201ENST00000579148 ASAP1Q9ULH1 1129 aa17.64■□□□□ 0.41
MIR3940-201ENST00000579148 DOT1LQ8TEK3 1739 aa17.64■□□□□ 0.41
MIR3940-201ENST00000579148 FLIIQ13045 1269 aa17.63■□□□□ 0.41
MIR3940-201ENST00000579148 CHPF2Q9P2E5 772 aa17.63■□□□□ 0.41
MIR3940-201ENST00000579148 ABCC4O15439 1325 aa17.63■□□□□ 0.41
MIR3940-201ENST00000579148 MVPQ14764 893 aaKnown RBP17.62■□□□□ 0.41
MIR3940-201ENST00000579148 NECTIN2Q92692 538 aa17.62■□□□□ 0.41
MIR3940-201ENST00000579148 DDX19BQ9UMR2 479 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms