RNA–Protein interactions for RNA: ENST00000579122.1

CDKN2A-213, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3 BASIC

Gene CDKN2A, Length 666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-213ENST00000579122 ERVV-2B6SEH9 535 aa26.41■■□□□ 1.82
CDKN2A-213ENST00000579122 ADCY9O60503 1353 aa26.41■■□□□ 1.82
CDKN2A-213ENST00000579122 KDRP35968 1356 aa26.41■■□□□ 1.82
CDKN2A-213ENST00000579122 HSP90AB1P08238 724 aaKnown RBP26.4■■□□□ 1.82
CDKN2A-213ENST00000579122 CEP350Q5VT06 3117 aa26.39■■□□□ 1.82
CDKN2A-213ENST00000579122 EIF4G2P78344 907 aaKnown RBP eCLIP26.39■■□□□ 1.82
CDKN2A-213ENST00000579122 DCAF5Q96JK2 942 aa26.39■■□□□ 1.82
CDKN2A-213ENST00000579122 PCGF6Q9BYE7 350 aa26.39■■□□□ 1.82
CDKN2A-213ENST00000579122 ZNF831Q5JPB2 1677 aa26.38■■□□□ 1.81
CDKN2A-213ENST00000579122 PLEKHO1Q53GL0 409 aaPredicted RBP26.38■■□□□ 1.81
CDKN2A-213ENST00000579122 PANK3Q9H999 370 aa26.38■■□□□ 1.81
CDKN2A-213ENST00000579122 GPBP1L1Q9HC44 474 aaPredicted RBP26.38■■□□□ 1.81
CDKN2A-213ENST00000579122 RTCBQ9Y3I0 505 aaKnown RBP26.37■■□□□ 1.81
CDKN2A-213ENST00000579122 TRAPPC3LQ5T215 181 aa26.36■■□□□ 1.81
CDKN2A-213ENST00000579122 SLC4A9Q96Q91 983 aa26.36■■□□□ 1.81
CDKN2A-213ENST00000579122 MMP10P09238 476 aa26.35■■□□□ 1.81
CDKN2A-213ENST00000579122 HSPA5P11021 654 aaKnown RBP26.35■■□□□ 1.81
CDKN2A-213ENST00000579122 AMOTQ4VCS5 1084 aa26.35■■□□□ 1.81
CDKN2A-213ENST00000579122 RC3H1Q5TC82 1133 aaKnown RBP26.35■■□□□ 1.81
CDKN2A-213ENST00000579122 RBM42Q9BTD8 480 aaKnown RBP26.35■■□□□ 1.81
CDKN2A-213ENST00000579122 NLGN1Q8N2Q7 840 aa26.34■■□□□ 1.81
CDKN2A-213ENST00000579122 WWC3Q9ULE0 1092 aa26.34■■□□□ 1.81
CDKN2A-213ENST00000579122 ADRA2BP18089 450 aa26.33■■□□□ 1.81
CDKN2A-213ENST00000579122 ZNF530Q6P9A1 599 aaPredicted RBP26.33■■□□□ 1.81
CDKN2A-213ENST00000579122 KDM6AO15550 1401 aaPredicted RBP26.32■■□□□ 1.8
CDKN2A-213ENST00000579122 CNTNAP4Q9C0A0 1308 aa26.32■■□□□ 1.8
CDKN2A-213ENST00000579122 CABP4P57796 275 aa26.31■■□□□ 1.8
CDKN2A-213ENST00000579122 COL5A3P25940 1745 aaPredicted RBP26.31■■□□□ 1.8
CDKN2A-213ENST00000579122 KIF13BQ9NQT8 1826 aa26.3■■□□□ 1.8
CDKN2A-213ENST00000579122 CICQ96RK0 1608 aaPredicted RBP26.3■■□□□ 1.8
CDKN2A-213ENST00000579122 TGFB2P61812 414 aa26.3■■□□□ 1.8
CDKN2A-213ENST00000579122 MORC1Q86VD1 984 aa26.3■■□□□ 1.8
CDKN2A-213ENST00000579122 ARHGEF1Q92888 912 aaKnown RBP26.3■■□□□ 1.8
CDKN2A-213ENST00000579122 PXDNLA1KZ92 1463 aa26.3■■□□□ 1.8
CDKN2A-213ENST00000579122 RPS6KA4O75676 772 aa26.29■■□□□ 1.8
CDKN2A-213ENST00000579122 ZNF526Q8TF50 670 aaPredicted RBP26.29■■□□□ 1.8
CDKN2A-213ENST00000579122 MTHFSP49914 203 aa26.28■■□□□ 1.8
CDKN2A-213ENST00000579122 C10orf71Q711Q0 1435 aa26.28■■□□□ 1.8
CDKN2A-213ENST00000579122 GYS1P13807 737 aa26.27■■□□□ 1.8
CDKN2A-213ENST00000579122 RFC4P35249 363 aa26.27■■□□□ 1.8
CDKN2A-213ENST00000579122 C1orf141Q5JVX7 400 aa26.27■■□□□ 1.8
CDKN2A-213ENST00000579122 AEBP1Q8IUX7 1158 aa26.27■■□□□ 1.8
CDKN2A-213ENST00000579122 KIAA1551Q9HCM1 1747 aa26.27■■□□□ 1.8
CDKN2A-213ENST00000579122 CCDC87Q9NVE4 849 aa26.25■■□□□ 1.79
CDKN2A-213ENST00000579122 SULT6B1Q6IMI4 303 aa26.24■■□□□ 1.79
CDKN2A-213ENST00000579122 C4AP0C0L4 1744 aa26.24■■□□□ 1.79
CDKN2A-213ENST00000579122 A0A0G2JLW4 131 aa26.23■■□□□ 1.79
CDKN2A-213ENST00000579122 PTCD1O75127 700 aaKnown RBP26.23■■□□□ 1.79
CDKN2A-213ENST00000579122 NFATC2IPQ8NCF5 419 aa26.23■■□□□ 1.79
CDKN2A-213ENST00000579122 KNSTRNQ9Y448 316 aa26.23■■□□□ 1.79
CDKN2A-213ENST00000579122 PARP3Q9Y6F1 533 aa26.23■■□□□ 1.79
CDKN2A-213ENST00000579122 N4BP2Q86UW6 1770 aaPredicted RBP26.22■■□□□ 1.79
CDKN2A-213ENST00000579122 MYH14Q7Z406 1995 aaKnown RBP26.21■■□□□ 1.79
CDKN2A-213ENST00000579122 HSPA6P17066 643 aa26.21■■□□□ 1.79
CDKN2A-213ENST00000579122 IL13P35225 146 aa26.21■■□□□ 1.79
CDKN2A-213ENST00000579122 BCS1LQ9Y276 419 aa26.21■■□□□ 1.79
CDKN2A-213ENST00000579122 CRKLP46109 303 aaKnown RBP26.2■■□□□ 1.78
CDKN2A-213ENST00000579122 DPEP1P16444 411 aa26.19■■□□□ 1.78
CDKN2A-213ENST00000579122 KIF3CO14782 793 aa26.18■■□□□ 1.78
CDKN2A-213ENST00000579122 TJP1Q07157 1748 aa26.17■■□□□ 1.78
CDKN2A-213ENST00000579122 AKAP4Q5JQC9 854 aa26.16■■□□□ 1.78
CDKN2A-213ENST00000579122 USP42Q9H9J4 1324 aaKnown RBP26.15■■□□□ 1.78
CDKN2A-213ENST00000579122 SCN11AQ9UI33 1791 aa26.15■■□□□ 1.78
CDKN2A-213ENST00000579122 FCHSD2O94868 740 aa26.15■■□□□ 1.78
CDKN2A-213ENST00000579122 AMER1Q5JTC6 1135 aaPredicted RBP26.15■■□□□ 1.78
CDKN2A-213ENST00000579122 ARHGAP27Q6ZUM4 889 aa26.15■■□□□ 1.78
CDKN2A-213ENST00000579122 SRP68Q9UHB9 627 aaKnown RBP26.14■■□□□ 1.78
CDKN2A-213ENST00000579122 BRCA1P38398 1863 aaKnown RBP26.13■■□□□ 1.77
CDKN2A-213ENST00000579122 KCNA3P22001 575 aa26.13■■□□□ 1.77
CDKN2A-213ENST00000579122 FKBP8Q14318 412 aa26.13■■□□□ 1.77
CDKN2A-213ENST00000579122 INTS5Q6P9B9 1019 aaKnown RBP26.13■■□□□ 1.77
CDKN2A-213ENST00000579122 CCER1Q8TC90 406 aaPredicted RBP26.12■■□□□ 1.77
CDKN2A-213ENST00000579122 SLC52A2Q9HAB3 445 aa26.12■■□□□ 1.77
CDKN2A-213ENST00000579122 PIM2Q9P1W9 311 aa26.11■■□□□ 1.77
CDKN2A-213ENST00000579122 DDR1Q08345 913 aa26.1■■□□□ 1.77
CDKN2A-213ENST00000579122 MRC1P22897 1456 aa26.1■■□□□ 1.77
CDKN2A-213ENST00000579122 LGR6Q9HBX8 967 aa26.09■■□□□ 1.77
CDKN2A-213ENST00000579122 ADAMTS7Q9UKP4 1686 aa26.09■■□□□ 1.77
CDKN2A-213ENST00000579122 DNAJC10Q8IXB1 793 aa26.08■■□□□ 1.77
CDKN2A-213ENST00000579122 ARFGEF1Q9Y6D6 1849 aa26.08■■□□□ 1.77
CDKN2A-213ENST00000579122 RNMTO43148 476 aaKnown RBP26.07■■□□□ 1.76
CDKN2A-213ENST00000579122 TM4SF1P30408 202 aa26.07■■□□□ 1.76
CDKN2A-213ENST00000579122 DALRD3Q5D0E6 543 aaKnown RBP26.07■■□□□ 1.76
CDKN2A-213ENST00000579122 IFFO2Q5TF58 517 aa26.07■■□□□ 1.76
CDKN2A-213ENST00000579122 KIF7Q2M1P5 1343 aa26.07■■□□□ 1.76
CDKN2A-213ENST00000579122 POLRMTO00411 1230 aaKnown RBP26.06■■□□□ 1.76
CDKN2A-213ENST00000579122 ZPR1O75312 459 aa26.06■■□□□ 1.76
CDKN2A-213ENST00000579122 TOMM70O94826 608 aa26.06■■□□□ 1.76
CDKN2A-213ENST00000579122 SOS1Q07889 1333 aaPredicted RBP26.06■■□□□ 1.76
CDKN2A-213ENST00000579122 HMOX1P09601 288 aa26.05■■□□□ 1.76
CDKN2A-213ENST00000579122 CYP19A1P11511 503 aaPredicted RBP26.05■■□□□ 1.76
CDKN2A-213ENST00000579122 C9orf131Q5VYM1 1079 aa26.05■■□□□ 1.76
CDKN2A-213ENST00000579122 USPL1Q5W0Q7 1092 aa26.04■■□□□ 1.76
CDKN2A-213ENST00000579122 SLC39A6Q13433 755 aa26.03■■□□□ 1.76
CDKN2A-213ENST00000579122 KCPQ6ZWJ8 1503 aa26.03■■□□□ 1.76
CDKN2A-213ENST00000579122 PER1O15534 1290 aaPredicted RBP26.02■■□□□ 1.76
CDKN2A-213ENST00000579122 APLP1P51693 650 aa26.02■■□□□ 1.76
CDKN2A-213ENST00000579122 MTHFSDQ2M296 383 aaKnown RBP26.02■■□□□ 1.76
CDKN2A-213ENST00000579122 NMRK2Q9NPI5 230 aa26.02■■□□□ 1.76
CDKN2A-213ENST00000579122 DIAPH1O60610 1272 aaKnown RBP26.01■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms