RNA–Protein interactions for RNA: ENST00000579057.5

LINC00271-204, long intergenic non-protein coding RNA 271, humanhuman

TSL 2

Gene LINC00271, Length 464 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-204ENST00000579057 ZNF831Q5JPB2 1677 aa12.77□□□□□ -0.36
LINC00271-204ENST00000579057 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.77□□□□□ -0.37
LINC00271-204ENST00000579057 HSPA5P11021 654 aaKnown RBP12.77□□□□□ -0.37
LINC00271-204ENST00000579057 TNNT2P45379 298 aaPredicted RBP12.77□□□□□ -0.37
LINC00271-204ENST00000579057 CD2APQ9Y5K6 639 aa12.77□□□□□ -0.37
LINC00271-204ENST00000579057 IGSF1Q8N6C5 1336 aa12.77□□□□□ -0.37
LINC00271-204ENST00000579057 COL5A3P25940 1745 aaPredicted RBP12.76□□□□□ -0.37
LINC00271-204ENST00000579057 MYH14Q7Z406 1995 aaKnown RBP12.76□□□□□ -0.37
LINC00271-204ENST00000579057 C1QTNF8P60827 252 aa12.76□□□□□ -0.37
LINC00271-204ENST00000579057 IFNL2Q8IZJ0 200 aa12.76□□□□□ -0.37
LINC00271-204ENST00000579057 AK7Q96M32 723 aa12.76□□□□□ -0.37
LINC00271-204ENST00000579057 SLC4A9Q96Q91 983 aa12.76□□□□□ -0.37
LINC00271-204ENST00000579057 PCGF6Q9BYE7 350 aa12.76□□□□□ -0.37
LINC00271-204ENST00000579057 ATG3Q9NT62 314 aa12.76□□□□□ -0.37
LINC00271-204ENST00000579057 TMOD3Q9NYL9 352 aa12.76□□□□□ -0.37
LINC00271-204ENST00000579057 KIAA1551Q9HCM1 1747 aa12.76□□□□□ -0.37
LINC00271-204ENST00000579057 KDM6AO15550 1401 aaPredicted RBP12.75□□□□□ -0.37
LINC00271-204ENST00000579057 PHF14O94880 888 aa12.75□□□□□ -0.37
LINC00271-204ENST00000579057 SSFA2P28290 1259 aa12.75□□□□□ -0.37
LINC00271-204ENST00000579057 POLR3GLQ9BT43 218 aa12.75□□□□□ -0.37
LINC00271-204ENST00000579057 PANK3Q9H999 370 aa12.75□□□□□ -0.37
LINC00271-204ENST00000579057 SPINK5Q9NQ38 1064 aaPredicted RBP12.75□□□□□ -0.37
LINC00271-204ENST00000579057 KIF13BQ9NQT8 1826 aa12.75□□□□□ -0.37
LINC00271-204ENST00000579057 GRIN3BO60391 1043 aa12.74□□□□□ -0.37
LINC00271-204ENST00000579057 HMGB2P26583 209 aaKnown RBP12.74□□□□□ -0.37
LINC00271-204ENST00000579057 ADCY9O60503 1353 aa12.73□□□□□ -0.37
LINC00271-204ENST00000579057 EIF4G2P78344 907 aaKnown RBP eCLIP12.73□□□□□ -0.37
LINC00271-204ENST00000579057 C4AP0C0L4 1744 aa12.72□□□□□ -0.37
LINC00271-204ENST00000579057 GNPATO15228 680 aa12.72□□□□□ -0.37
LINC00271-204ENST00000579057 ATP6V1AP38606 617 aa12.72□□□□□ -0.37
LINC00271-204ENST00000579057 AEBP1Q8IUX7 1158 aa12.72□□□□□ -0.37
LINC00271-204ENST00000579057 ATP10DQ9P241 1426 aa12.71□□□□□ -0.37
LINC00271-204ENST00000579057 ERVV-2B6SEH9 535 aa12.71□□□□□ -0.37
LINC00271-204ENST00000579057 SCN11AQ9UI33 1791 aa12.71□□□□□ -0.38
LINC00271-204ENST00000579057 CICQ96RK0 1608 aaPredicted RBP12.7□□□□□ -0.38
LINC00271-204ENST00000579057 SENP3-EIF4A1A0A087X0R7 540 aa12.7□□□□□ -0.38
LINC00271-204ENST00000579057 GIGYF1O75420 1035 aaPredicted RBP12.7□□□□□ -0.38
LINC00271-204ENST00000579057 N4BP2Q86UW6 1770 aaPredicted RBP12.7□□□□□ -0.38
LINC00271-204ENST00000579057 TJP1Q07157 1748 aa12.7□□□□□ -0.38
LINC00271-204ENST00000579057 BRCA1P38398 1863 aaKnown RBP12.7□□□□□ -0.38
LINC00271-204ENST00000579057 ZNF530Q6P9A1 599 aaPredicted RBP12.69□□□□□ -0.38
LINC00271-204ENST00000579057 DCAF5Q96JK2 942 aa12.69□□□□□ -0.38
LINC00271-204ENST00000579057 WWC3Q9ULE0 1092 aa12.69□□□□□ -0.38
LINC00271-204ENST00000579057 PXDNLA1KZ92 1463 aa12.69□□□□□ -0.38
LINC00271-204ENST00000579057 ADAMTS7Q9UKP4 1686 aa12.69□□□□□ -0.38
LINC00271-204ENST00000579057 VIRMAQ69YN4 1812 aaKnown RBP12.69□□□□□ -0.38
LINC00271-204ENST00000579057 MMP10P09238 476 aa12.68□□□□□ -0.38
LINC00271-204ENST00000579057 IL13P35225 146 aa12.68□□□□□ -0.38
LINC00271-204ENST00000579057 PLEKHO1Q53GL0 409 aaPredicted RBP12.68□□□□□ -0.38
LINC00271-204ENST00000579057 RC3H1Q5TC82 1133 aaKnown RBP12.68□□□□□ -0.38
LINC00271-204ENST00000579057 CNTNAP4Q9C0A0 1308 aa12.67□□□□□ -0.38
LINC00271-204ENST00000579057 HSP90AB1P08238 724 aaKnown RBP12.67□□□□□ -0.38
LINC00271-204ENST00000579057 AMOTQ4VCS5 1084 aa12.67□□□□□ -0.38
LINC00271-204ENST00000579057 AMER1Q5JTC6 1135 aaPredicted RBP12.67□□□□□ -0.38
LINC00271-204ENST00000579057 MORC1Q86VD1 984 aa12.67□□□□□ -0.38
LINC00271-204ENST00000579057 C10orf71Q711Q0 1435 aa12.67□□□□□ -0.38
LINC00271-204ENST00000579057 GYS1P13807 737 aa12.66□□□□□ -0.38
LINC00271-204ENST00000579057 ARHGEF1Q92888 912 aaKnown RBP12.66□□□□□ -0.38
LINC00271-204ENST00000579057 RBM42Q9BTD8 480 aaKnown RBP12.66□□□□□ -0.38
LINC00271-204ENST00000579057 RPS6KA4O75676 772 aa12.65□□□□□ -0.38
LINC00271-204ENST00000579057 CABP4P57796 275 aa12.65□□□□□ -0.38
LINC00271-204ENST00000579057 TRAPPC3LQ5T215 181 aa12.65□□□□□ -0.38
LINC00271-204ENST00000579057 SULT6B1Q6IMI4 303 aa12.65□□□□□ -0.38
LINC00271-204ENST00000579057 RTCBQ9Y3I0 505 aaKnown RBP12.65□□□□□ -0.38
LINC00271-204ENST00000579057 MTHFSP49914 203 aa12.64□□□□□ -0.39
LINC00271-204ENST00000579057 NFATC2IPQ8NCF5 419 aa12.64□□□□□ -0.39
LINC00271-204ENST00000579057 MRC1P22897 1456 aa12.64□□□□□ -0.39
LINC00271-204ENST00000579057 KIF7Q2M1P5 1343 aa12.63□□□□□ -0.39
LINC00271-204ENST00000579057 PTCD1O75127 700 aaKnown RBP12.63□□□□□ -0.39
LINC00271-204ENST00000579057 NLGN1Q8N2Q7 840 aa12.63□□□□□ -0.39
LINC00271-204ENST00000579057 KNSTRNQ9Y448 316 aa12.63□□□□□ -0.39
LINC00271-204ENST00000579057 ARFGEF1Q9Y6D6 1849 aa12.62□□□□□ -0.39
LINC00271-204ENST00000579057 A0A0G2JLW4 131 aa12.62□□□□□ -0.39
LINC00271-204ENST00000579057 PER1O15534 1290 aaPredicted RBP12.62□□□□□ -0.39
LINC00271-204ENST00000579057 CRKLP46109 303 aaKnown RBP12.62□□□□□ -0.39
LINC00271-204ENST00000579057 C1orf141Q5JVX7 400 aa12.62□□□□□ -0.39
LINC00271-204ENST00000579057 CCER1Q8TC90 406 aaPredicted RBP12.62□□□□□ -0.39
LINC00271-204ENST00000579057 GPBP1L1Q9HC44 474 aaPredicted RBP12.62□□□□□ -0.39
LINC00271-204ENST00000579057 DPEP1P16444 411 aa12.61□□□□□ -0.39
LINC00271-204ENST00000579057 KCNA3P22001 575 aa12.61□□□□□ -0.39
LINC00271-204ENST00000579057 TGFB2P61812 414 aa12.61□□□□□ -0.39
LINC00271-204ENST00000579057 DDR1Q08345 913 aa12.61□□□□□ -0.39
LINC00271-204ENST00000579057 INTS5Q6P9B9 1019 aaKnown RBP12.61□□□□□ -0.39
LINC00271-204ENST00000579057 ZNF526Q8TF50 670 aaPredicted RBP12.61□□□□□ -0.39
LINC00271-204ENST00000579057 LGR6Q9HBX8 967 aa12.61□□□□□ -0.39
LINC00271-204ENST00000579057 SRP68Q9UHB9 627 aaKnown RBP12.61□□□□□ -0.39
LINC00271-204ENST00000579057 KCPQ6ZWJ8 1503 aa12.61□□□□□ -0.39
LINC00271-204ENST00000579057 UBR2Q8IWV8 1755 aa12.61□□□□□ -0.39
LINC00271-204ENST00000579057 USP42Q9H9J4 1324 aaKnown RBP12.61□□□□□ -0.39
LINC00271-204ENST00000579057 COL3A1P02461 1466 aaPredicted RBP12.6□□□□□ -0.39
LINC00271-204ENST00000579057 KIF3CO14782 793 aa12.6□□□□□ -0.39
LINC00271-204ENST00000579057 RFC4P35249 363 aa12.6□□□□□ -0.39
LINC00271-204ENST00000579057 FKBP8Q14318 412 aa12.6□□□□□ -0.39
LINC00271-204ENST00000579057 AKAP4Q5JQC9 854 aa12.6□□□□□ -0.39
LINC00271-204ENST00000579057 SLC52A2Q9HAB3 445 aa12.6□□□□□ -0.39
LINC00271-204ENST00000579057 ZNF219Q9P2Y4 722 aaPredicted RBP12.59□□□□□ -0.39
LINC00271-204ENST00000579057 AFDNP55196 1824 aaKnown RBP12.59□□□□□ -0.39
LINC00271-204ENST00000579057 RNMTO43148 476 aaKnown RBP12.58□□□□□ -0.4
LINC00271-204ENST00000579057 HMOX1P09601 288 aa12.58□□□□□ -0.4
LINC00271-204ENST00000579057 DNAJC10Q8IXB1 793 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms