RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 K7ELQ4 463 aaPredicted RBP5.77□□□□□ -1.49
SMARCE1-215ENST00000578995 GPR161Q8N6U8 529 aaKnown RBP5.77□□□□□ -1.49
SMARCE1-215ENST00000578995 GALNT6Q8NCL4 622 aa5.77□□□□□ -1.49
SMARCE1-215ENST00000578995 COL25A1Q9BXS0 654 aaPredicted RBP5.77□□□□□ -1.49
SMARCE1-215ENST00000578995 PPLO60437 1756 aa5.77□□□□□ -1.49
SMARCE1-215ENST00000578995 PLA2R1Q13018 1463 aa5.77□□□□□ -1.49
SMARCE1-215ENST00000578995 SETD1AO15047 1707 aaKnown RBP5.77□□□□□ -1.49
SMARCE1-215ENST00000578995 SETD5Q9C0A6 1442 aa5.76□□□□□ -1.49
SMARCE1-215ENST00000578995 KIF3BO15066 747 aa5.76□□□□□ -1.49
SMARCE1-215ENST00000578995 ADH1CP00326 375 aa5.76□□□□□ -1.49
SMARCE1-215ENST00000578995 NNTQ13423 1086 aa5.76□□□□□ -1.49
SMARCE1-215ENST00000578995 RAB3GAP2Q9H2M9 1393 aa5.76□□□□□ -1.49
SMARCE1-215ENST00000578995 NEURL4Q96JN8 1562 aa5.76□□□□□ -1.49
SMARCE1-215ENST00000578995 PTPRTO14522 1441 aa5.75□□□□□ -1.49
SMARCE1-215ENST00000578995 ADGRB3O60242 1522 aa5.75□□□□□ -1.49
SMARCE1-215ENST00000578995 SLURP2P0DP57 97 aa5.75□□□□□ -1.49
SMARCE1-215ENST00000578995 TIMP2P16035 220 aa5.75□□□□□ -1.49
SMARCE1-215ENST00000578995 ITGAEP38570 1179 aa5.75□□□□□ -1.49
SMARCE1-215ENST00000578995 MLLT3P42568 568 aaPredicted RBP5.75□□□□□ -1.49
SMARCE1-215ENST00000578995 WDR4P57081 412 aaKnown RBP5.75□□□□□ -1.49
SMARCE1-215ENST00000578995 ZMYM3Q14202 1370 aa5.75□□□□□ -1.49
SMARCE1-215ENST00000578995 NRXN3Q9Y4C0 1643 aa5.74□□□□□ -1.49
SMARCE1-215ENST00000578995 MPNDQ8N594 471 aa5.74□□□□□ -1.49
SMARCE1-215ENST00000578995 WHAMMQ8TF30 809 aa5.74□□□□□ -1.49
SMARCE1-215ENST00000578995 ARID4BQ4LE39 1312 aaPredicted RBP5.74□□□□□ -1.49
SMARCE1-215ENST00000578995 STRCP1A6NGW2 1772 aa5.73□□□□□ -1.49
SMARCE1-215ENST00000578995 IQGAP1P46940 1657 aa5.73□□□□□ -1.49
SMARCE1-215ENST00000578995 A2ML1A8K2U0 1454 aa5.73□□□□□ -1.49
SMARCE1-215ENST00000578995 NLRP1Q9C000 1473 aa5.73□□□□□ -1.49
SMARCE1-215ENST00000578995 ARHGAP23Q9P227 1491 aa5.73□□□□□ -1.49
SMARCE1-215ENST00000578995 MLECQ14165 292 aa5.73□□□□□ -1.49
SMARCE1-215ENST00000578995 GGT6Q6P531 493 aa5.73□□□□□ -1.49
SMARCE1-215ENST00000578995 NANOS1Q8WY41 292 aaKnown RBP5.73□□□□□ -1.49
SMARCE1-215ENST00000578995 SLIT1O75093 1534 aa5.73□□□□□ -1.49
SMARCE1-215ENST00000578995 XIRP1Q702N8 1843 aaKnown RBP5.72□□□□□ -1.49
SMARCE1-215ENST00000578995 NUP155O75694 1391 aa5.72□□□□□ -1.49
SMARCE1-215ENST00000578995 BTBD11A6QL63 1104 aa5.72□□□□□ -1.49
SMARCE1-215ENST00000578995 PHF20L1A8MW92 1017 aa5.72□□□□□ -1.49
SMARCE1-215ENST00000578995 PROCP04070 461 aa5.72□□□□□ -1.49
SMARCE1-215ENST00000578995 HRCP23327 699 aa5.72□□□□□ -1.49
SMARCE1-215ENST00000578995 CEBPAP49715 358 aaPredicted RBP5.72□□□□□ -1.49
SMARCE1-215ENST00000578995 SH3BP2P78314 561 aa5.72□□□□□ -1.49
SMARCE1-215ENST00000578995 C6orf118Q5T5N4 469 aa5.72□□□□□ -1.49
SMARCE1-215ENST00000578995 DCAF5Q96JK2 942 aa5.72□□□□□ -1.49
SMARCE1-215ENST00000578995 TLL2Q9Y6L7 1015 aa5.72□□□□□ -1.49
SMARCE1-215ENST00000578995 NEXMIFQ5QGS0 1516 aa5.72□□□□□ -1.49
SMARCE1-215ENST00000578995 UPP2O95045 317 aa5.71□□□□□ -1.5
SMARCE1-215ENST00000578995 TRIM26Q12899 539 aaPredicted RBP5.71□□□□□ -1.5
SMARCE1-215ENST00000578995 FBXO31Q5XUX0 539 aaPredicted RBP5.71□□□□□ -1.5
SMARCE1-215ENST00000578995 WASHC2CQ9Y4E1 1318 aa5.71□□□□□ -1.5
SMARCE1-215ENST00000578995 KANK1Q14678 1352 aa5.7□□□□□ -1.5
SMARCE1-215ENST00000578995 TNRQ92752 1358 aa5.7□□□□□ -1.5
SMARCE1-215ENST00000578995 CHD2O14647 1828 aaKnown RBP5.7□□□□□ -1.5
SMARCE1-215ENST00000578995 BMP2P12643 396 aa5.7□□□□□ -1.5
SMARCE1-215ENST00000578995 JUNDP17535 347 aa5.7□□□□□ -1.5
SMARCE1-215ENST00000578995 VARSP26640 1264 aaKnown RBP5.7□□□□□ -1.5
SMARCE1-215ENST00000578995 MAP3K10Q02779 954 aa5.7□□□□□ -1.5
SMARCE1-215ENST00000578995 RNFT1Q5M7Z0 435 aa5.7□□□□□ -1.5
SMARCE1-215ENST00000578995 PTCRAQ6ISU1 281 aaPredicted RBP5.7□□□□□ -1.5
SMARCE1-215ENST00000578995 NUDT12Q9BQG2 462 aa5.7□□□□□ -1.5
SMARCE1-215ENST00000578995 KLF16Q9BXK1 252 aaPredicted RBP5.7□□□□□ -1.5
SMARCE1-215ENST00000578995 ZFYVE9O95405 1425 aa5.7□□□□□ -1.5
SMARCE1-215ENST00000578995 DHX57Q6P158 1386 aaKnown RBP5.69□□□□□ -1.5
SMARCE1-215ENST00000578995 UHRF1BP1Q6BDS2 1440 aa5.69□□□□□ -1.5
SMARCE1-215ENST00000578995 SPATA31E1Q6ZUB1 1445 aa5.69□□□□□ -1.5
SMARCE1-215ENST00000578995 ITGB2P05107 769 aa5.69□□□□□ -1.5
SMARCE1-215ENST00000578995 HIC1Q14526 733 aa5.69□□□□□ -1.5
SMARCE1-215ENST00000578995 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.69□□□□□ -1.56e-7■■□□□ 13.5
SMARCE1-215ENST00000578995 ENAMQ9NRM1 1142 aa5.69□□□□□ -1.5
SMARCE1-215ENST00000578995 MED14O60244 1454 aa5.69□□□□□ -1.5
SMARCE1-215ENST00000578995 ANKRD30BQ9BXX2 1392 aa5.68□□□□□ -1.5
SMARCE1-215ENST00000578995 KRTAP4-12Q9BQ66 201 aa5.68□□□□□ -1.5
SMARCE1-215ENST00000578995 DNMT3LQ9UJW3 386 aa5.68□□□□□ -1.5
SMARCE1-215ENST00000578995 SOS2Q07890 1332 aaPredicted RBP5.68□□□□□ -1.5
SMARCE1-215ENST00000578995 KNDC1Q76NI1 1749 aa5.68□□□□□ -1.5
SMARCE1-215ENST00000578995 XRN1Q8IZH2 1706 aaKnown RBP5.68□□□□□ -1.5
SMARCE1-215ENST00000578995 KIAA1210Q9ULL0 1709 aa5.68□□□□□ -1.5
SMARCE1-215ENST00000578995 NWD1Q149M9 1564 aa5.67□□□□□ -1.5
SMARCE1-215ENST00000578995 SETBP1Q9Y6X0 1596 aa5.67□□□□□ -1.5
SMARCE1-215ENST00000578995 ZIC2O95409 532 aaPredicted RBP5.67□□□□□ -1.5
SMARCE1-215ENST00000578995 LINC00528Q8N1L1 170 aa5.67□□□□□ -1.5
SMARCE1-215ENST00000578995 MPHOSPH9Q99550 1183 aa5.67□□□□□ -1.5
SMARCE1-215ENST00000578995 ASXL1Q8IXJ9 1541 aa5.67□□□□□ -1.5
SMARCE1-215ENST00000578995 LAMC1P11047 1609 aa5.66□□□□□ -1.5
SMARCE1-215ENST00000578995 NRXN1Q9ULB1 1477 aa5.66□□□□□ -1.5
SMARCE1-215ENST00000578995 PTSQ03393 145 aa5.66□□□□□ -1.5
SMARCE1-215ENST00000578995 LYPD4Q6UWN0 246 aa5.66□□□□□ -1.5
SMARCE1-215ENST00000578995 ARHGEF1Q92888 912 aaKnown RBP5.66□□□□□ -1.5
SMARCE1-215ENST00000578995 TRPM1Q7Z4N2 1603 aa5.66□□□□□ -1.5
SMARCE1-215ENST00000578995 MYOM2P54296 1465 aa5.65□□□□□ -1.5
SMARCE1-215ENST00000578995 DIP2AQ14689 1571 aa5.65□□□□□ -1.5
SMARCE1-215ENST00000578995 BAG6P46379 1132 aa5.65□□□□□ -1.5
SMARCE1-215ENST00000578995 IDI1Q13907 227 aa5.65□□□□□ -1.5
SMARCE1-215ENST00000578995 BEND7Q8N7W2 519 aaPredicted RBP5.65□□□□□ -1.5
SMARCE1-215ENST00000578995 KRTAP9-9Q9BYP9 154 aa5.65□□□□□ -1.5
SMARCE1-215ENST00000578995 KRTAP9-4Q9BYQ2 154 aa5.65□□□□□ -1.5
SMARCE1-215ENST00000578995 ZFAND3Q9H8U3 227 aa5.65□□□□□ -1.5
SMARCE1-215ENST00000578995 LTBP4Q8N2S1 1624 aa5.65□□□□□ -1.51
SMARCE1-215ENST00000578995 ACIN1Q9UKV3 1341 aaKnown RBP5.65□□□□□ -1.51
SMARCE1-215ENST00000578995 SCAF11Q99590 1463 aaKnown RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms