RNA–Protein interactions for RNA: ENST00000578830.5

NUP85-208, Transcript of nucleoporin 85, humanhuman

TSL 5

Gene NUP85, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-208ENST00000578830 HMGB2P26583 209 aaKnown RBP12.33□□□□□ -0.44
NUP85-208ENST00000578830 COL23A1Q86Y22 540 aaPredicted RBP12.33□□□□□ -0.44
NUP85-208ENST00000578830 MAP2P11137 1827 aaKnown RBP12.32□□□□□ -0.44
NUP85-208ENST00000578830 SMG6Q86US8 1419 aaKnown RBP12.31□□□□□ -0.44
NUP85-208ENST00000578830 SLC24A1O60721 1099 aa12.31□□□□□ -0.44
NUP85-208ENST00000578830 FBLN1P23142 703 aa12.31□□□□□ -0.44
NUP85-208ENST00000578830 IFFO2Q5TF58 517 aa12.31□□□□□ -0.44
NUP85-208ENST00000578830 CD2APQ9Y5K6 639 aa12.31□□□□□ -0.44
NUP85-208ENST00000578830 KIF13BQ9NQT8 1826 aa12.3□□□□□ -0.44
NUP85-208ENST00000578830 ATP10DQ9P241 1426 aa12.3□□□□□ -0.44
NUP85-208ENST00000578830 POTEIP0CG38 1075 aa12.3□□□□□ -0.44
NUP85-208ENST00000578830 VASPP50552 380 aaPredicted RBP12.3□□□□□ -0.44
NUP85-208ENST00000578830 CLCN6P51797 869 aa12.3□□□□□ -0.44
NUP85-208ENST00000578830 NBPF6Q5VWK0 638 aa12.3□□□□□ -0.44
NUP85-208ENST00000578830 FLAD1Q8NFF5 587 aa12.3□□□□□ -0.44
NUP85-208ENST00000578830 NBPF4Q96M43 638 aa12.3□□□□□ -0.44
NUP85-208ENST00000578830 TESK2Q96S53 571 aa12.3□□□□□ -0.44
NUP85-208ENST00000578830 ANKRD26Q9UPS8 1709 aa12.29□□□□□ -0.44
NUP85-208ENST00000578830 MSL1Q68DK7 614 aa12.29□□□□□ -0.44
NUP85-208ENST00000578830 RAPGEF4Q8WZA2 1011 aa12.29□□□□□ -0.44
NUP85-208ENST00000578830 TATP17735 454 aaPredicted RBP12.28□□□□□ -0.44
NUP85-208ENST00000578830 RRS1Q15050 365 aaKnown RBP12.28□□□□□ -0.44
NUP85-208ENST00000578830 USHBP1Q8N6Y0 703 aa12.28□□□□□ -0.44
NUP85-208ENST00000578830 ZBTB47Q9UFB7 747 aaPredicted RBP12.28□□□□□ -0.44
NUP85-208ENST00000578830 PCDH11XQ9BZA7 1347 aa12.28□□□□□ -0.44
NUP85-208ENST00000578830 PCDH11YQ9BZA8 1340 aa12.28□□□□□ -0.44
NUP85-208ENST00000578830 ADCY9O60503 1353 aa12.28□□□□□ -0.44
NUP85-208ENST00000578830 PALLDQ8WX93 1383 aa12.28□□□□□ -0.44
NUP85-208ENST00000578830 ST20-MTHFSA0A0A6YYL1 179 aa12.27□□□□□ -0.45
NUP85-208ENST00000578830 FYB1O15117 783 aa12.27□□□□□ -0.45
NUP85-208ENST00000578830 INSRP06213 1382 aa12.27□□□□□ -0.45
NUP85-208ENST00000578830 N4BP2Q86UW6 1770 aaPredicted RBP12.26□□□□□ -0.45
NUP85-208ENST00000578830 BRCA1P38398 1863 aaKnown RBP12.26□□□□□ -0.45
NUP85-208ENST00000578830 NUBP1P53384 320 aa12.26□□□□□ -0.45
NUP85-208ENST00000578830 GPBP1L1Q9HC44 474 aaPredicted RBP12.26□□□□□ -0.45
NUP85-208ENST00000578830 KIF24Q5T7B8 1368 aa12.26□□□□□ -0.45
NUP85-208ENST00000578830 NSD3Q9BZ95 1437 aa12.26□□□□□ -0.45
NUP85-208ENST00000578830 KIAA1551Q9HCM1 1747 aa12.25□□□□□ -0.45
NUP85-208ENST00000578830 MPRIPQ6WCQ1 1025 aa12.25□□□□□ -0.45
NUP85-208ENST00000578830 SMARCC1Q92922 1105 aaPredicted RBP12.25□□□□□ -0.45
NUP85-208ENST00000578830 GGNBP2Q9H3C7 697 aa12.25□□□□□ -0.45
NUP85-208ENST00000578830 FLT4P35916 1363 aa12.25□□□□□ -0.45
NUP85-208ENST00000578830 AK7Q96M32 723 aa12.24□□□□□ -0.45
NUP85-208ENST00000578830 DCBLD2Q96PD2 775 aa12.24□□□□□ -0.45
NUP85-208ENST00000578830 CICQ96RK0 1608 aaPredicted RBP12.24□□□□□ -0.45
NUP85-208ENST00000578830 ZNF831Q5JPB2 1677 aa12.23□□□□□ -0.45
NUP85-208ENST00000578830 IGSF1Q8N6C5 1336 aa12.23□□□□□ -0.45
NUP85-208ENST00000578830 CYP27B1O15528 508 aa12.23□□□□□ -0.45
NUP85-208ENST00000578830 HSPA6P17066 643 aa12.23□□□□□ -0.45
NUP85-208ENST00000578830 HSP90AB2PQ58FF8 381 aa12.23□□□□□ -0.45
NUP85-208ENST00000578830 TIMELESSQ9UNS1 1208 aa12.23□□□□□ -0.45
NUP85-208ENST00000578830 PCNTO95613 3336 aa12.23□□□□□ -0.45
NUP85-208ENST00000578830 ARFGEF1Q9Y6D6 1849 aa12.23□□□□□ -0.45
NUP85-208ENST00000578830 NCAPD2Q15021 1401 aa12.22□□□□□ -0.45
NUP85-208ENST00000578830 AMIGO3Q86WK7 504 aa12.22□□□□□ -0.45
NUP85-208ENST00000578830 MS4A3Q96HJ5 214 aa12.22□□□□□ -0.45
NUP85-208ENST00000578830 COL5A3P25940 1745 aaPredicted RBP12.22□□□□□ -0.45
NUP85-208ENST00000578830 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.21□□□□□ -0.45
NUP85-208ENST00000578830 SSFA2P28290 1259 aa12.21□□□□□ -0.45
NUP85-208ENST00000578830 TMF1P82094 1093 aa12.21□□□□□ -0.45
NUP85-208ENST00000578830 NKX1-1Q15270 411 aaPredicted RBP12.21□□□□□ -0.45
NUP85-208ENST00000578830 MYH14Q7Z406 1995 aaKnown RBP12.21□□□□□ -0.46
NUP85-208ENST00000578830 PHF14O94880 888 aa12.2□□□□□ -0.46
NUP85-208ENST00000578830 ZNF526Q8TF50 670 aaPredicted RBP12.2□□□□□ -0.46
NUP85-208ENST00000578830 PIGBQ92521 554 aa12.2□□□□□ -0.46
NUP85-208ENST00000578830 SBF1O95248 1867 aa12.19□□□□□ -0.46
NUP85-208ENST00000578830 LOC102724428A0A0B4J2F2 783 aa12.19□□□□□ -0.46
NUP85-208ENST00000578830 SIK1P57059 783 aa12.19□□□□□ -0.46
NUP85-208ENST00000578830 C4AP0C0L4 1744 aa12.19□□□□□ -0.46
NUP85-208ENST00000578830 VIRMAQ69YN4 1812 aaKnown RBP12.18□□□□□ -0.46
NUP85-208ENST00000578830 LINC00116Q8NCU8 138 aa12.18□□□□□ -0.46
NUP85-208ENST00000578830 KIF12Q96FN5 646 aa12.18□□□□□ -0.46
NUP85-208ENST00000578830 SPG7Q9UQ90 795 aa12.18□□□□□ -0.46
NUP85-208ENST00000578830 KIF3CO14782 793 aa12.17□□□□□ -0.46
NUP85-208ENST00000578830 CDCA8Q53HL2 280 aa12.17□□□□□ -0.46
NUP85-208ENST00000578830 SMIM5Q71RC9 77 aa12.17□□□□□ -0.46
NUP85-208ENST00000578830 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.17□□□□□ -0.46
NUP85-208ENST00000578830 TMOD3Q9NYL9 352 aa12.17□□□□□ -0.46
NUP85-208ENST00000578830 WWC3Q9ULE0 1092 aa12.17□□□□□ -0.46
NUP85-208ENST00000578830 EMILIN1Q9Y6C2 1016 aa12.17□□□□□ -0.46
NUP85-208ENST00000578830 WDR90Q96KV7 1748 aa12.17□□□□□ -0.46
NUP85-208ENST00000578830 PXDNLA1KZ92 1463 aa12.15□□□□□ -0.46
NUP85-208ENST00000578830 WASHC2AQ641Q2 1341 aa12.15□□□□□ -0.46
NUP85-208ENST00000578830 CCDC88AQ3V6T2 1871 aa12.15□□□□□ -0.46
NUP85-208ENST00000578830 GNPATO15228 680 aa12.15□□□□□ -0.46
NUP85-208ENST00000578830 MAP3K13O43283 966 aa12.15□□□□□ -0.46
NUP85-208ENST00000578830 ATP6V1AP38606 617 aa12.15□□□□□ -0.46
NUP85-208ENST00000578830 ITPK1Q13572 414 aa12.15□□□□□ -0.46
NUP85-208ENST00000578830 FAM212AQ96EL1 285 aa12.15□□□□□ -0.46
NUP85-208ENST00000578830 CARD14Q9BXL6 1004 aa12.15□□□□□ -0.46
NUP85-208ENST00000578830 ASAP1Q9ULH1 1129 aa12.15□□□□□ -0.46
NUP85-208ENST00000578830 MMP10P09238 476 aa12.14□□□□□ -0.47
NUP85-208ENST00000578830 IFNL2Q8IZJ0 200 aa12.14□□□□□ -0.47
NUP85-208ENST00000578830 PLEKHG2Q9H7P9 1386 aa12.14□□□□□ -0.47
NUP85-208ENST00000578830 PPM1GO15355 546 aaPredicted RBP12.13□□□□□ -0.47
NUP85-208ENST00000578830 PHKG2P15735 406 aa12.13□□□□□ -0.47
NUP85-208ENST00000578830 APLP1P51693 650 aa12.13□□□□□ -0.47
NUP85-208ENST00000578830 TGFB2P61812 414 aa12.13□□□□□ -0.47
NUP85-208ENST00000578830 EYA1Q99502 592 aa12.13□□□□□ -0.47
NUP85-208ENST00000578830 ATG3Q9NT62 314 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms