RNA–Protein interactions for RNA: ENST00000578664.1

GAPLINC-201, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-201ENST00000578664 SLC6A16Q9GZN6 736 aa5.89□□□□□ -1.47
GAPLINC-201ENST00000578664 PIF1Q9H611 641 aa5.89□□□□□ -1.47
GAPLINC-201ENST00000578664 ZSWIM4Q9H7M6 989 aa5.89□□□□□ -1.47
GAPLINC-201ENST00000578664 CCSER2Q9H7U1 834 aa5.89□□□□□ -1.47
GAPLINC-201ENST00000578664 CXXC1Q9P0U4 656 aaPredicted RBP5.89□□□□□ -1.47
GAPLINC-201ENST00000578664 ZBBXA8MT70 800 aa5.88□□□□□ -1.47
GAPLINC-201ENST00000578664 EIF3JO75822 258 aaKnown RBP5.88□□□□□ -1.47
GAPLINC-201ENST00000578664 FANCCQ00597 558 aa5.88□□□□□ -1.47
GAPLINC-201ENST00000578664 OCLNQ16625 522 aa5.88□□□□□ -1.47
GAPLINC-201ENST00000578664 PTPRNQ16849 979 aa5.88□□□□□ -1.47
GAPLINC-201ENST00000578664 HSP90AB2PQ58FF8 381 aa5.88□□□□□ -1.47
GAPLINC-201ENST00000578664 DEPDC4Q8N2C3 294 aa5.88□□□□□ -1.47
GAPLINC-201ENST00000578664 KLHL42Q9P2K6 505 aa5.88□□□□□ -1.47
GAPLINC-201ENST00000578664 S1PR4O95977 384 aa5.87□□□□□ -1.47
GAPLINC-201ENST00000578664 F12P00748 615 aaPredicted RBP5.87□□□□□ -1.47
GAPLINC-201ENST00000578664 P4HBP07237 508 aaKnown RBP5.87□□□□□ -1.47
GAPLINC-201ENST00000578664 XPCQ01831 940 aaPredicted RBP5.87□□□□□ -1.47
GAPLINC-201ENST00000578664 ZNF211Q13398 564 aaPredicted RBP5.87□□□□□ -1.47
GAPLINC-201ENST00000578664 NCOA4Q13772 614 aa5.87□□□□□ -1.47
GAPLINC-201ENST00000578664 TMC4Q7Z404 712 aa5.87□□□□□ -1.47
GAPLINC-201ENST00000578664 FAM174AQ8TBP5 190 aa5.87□□□□□ -1.47
GAPLINC-201ENST00000578664 TSC1Q92574 1164 aa5.87□□□□□ -1.47
GAPLINC-201ENST00000578664 RBCK1Q9BYM8 510 aa5.87□□□□□ -1.47
GAPLINC-201ENST00000578664 TMX1Q9H3N1 280 aa5.87□□□□□ -1.47
GAPLINC-201ENST00000578664 IQSEC3Q9UPP2 1182 aaPredicted RBP5.87□□□□□ -1.47
GAPLINC-201ENST00000578664 FAN1Q9Y2M0 1017 aa5.87□□□□□ -1.47
GAPLINC-201ENST00000578664 HMGB1P1B2RPK0 211 aaPredicted RBP5.86□□□□□ -1.47
GAPLINC-201ENST00000578664 MAP4K4O95819 1239 aaPredicted RBP5.86□□□□□ -1.47
GAPLINC-201ENST00000578664 FBXO45P0C2W1 286 aa5.86□□□□□ -1.47
GAPLINC-201ENST00000578664 ATP1A2P50993 1020 aa5.86□□□□□ -1.47
GAPLINC-201ENST00000578664 ARID5AQ03989 594 aa5.86□□□□□ -1.47
GAPLINC-201ENST00000578664 MAP7D1Q3KQU3 841 aa5.86□□□□□ -1.47
GAPLINC-201ENST00000578664 TRIM50Q86XT4 487 aa5.86□□□□□ -1.47
GAPLINC-201ENST00000578664 OGFOD1Q8N543 542 aa5.86□□□□□ -1.47
GAPLINC-201ENST00000578664 GTF3C2Q8WUA4 911 aaPredicted RBP5.86□□□□□ -1.47
GAPLINC-201ENST00000578664 VTI1AQ96AJ9 217 aa5.86□□□□□ -1.47
GAPLINC-201ENST00000578664 OSBPL2Q9H1P3 480 aa5.86□□□□□ -1.47
GAPLINC-201ENST00000578664 ANO2Q9NQ90 1003 aa5.86□□□□□ -1.47
GAPLINC-201ENST00000578664 EVA1BQ9NVM1 165 aa5.86□□□□□ -1.47
GAPLINC-201ENST00000578664 CHPF2Q9P2E5 772 aa5.86□□□□□ -1.47
GAPLINC-201ENST00000578664 CHIC2Q9UKJ5 165 aa5.86□□□□□ -1.47
GAPLINC-201ENST00000578664 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.86□□□□□ -1.47
GAPLINC-201ENST00000578664 CCDC194A0A1B0GVG4 234 aa5.85□□□□□ -1.47
GAPLINC-201ENST00000578664 SORBS3O60504 671 aa5.85□□□□□ -1.47
GAPLINC-201ENST00000578664 CCNYL3P0C7X3 344 aa5.85□□□□□ -1.47
GAPLINC-201ENST00000578664 ZNF76P36508 570 aa5.85□□□□□ -1.47
GAPLINC-201ENST00000578664 HSP90AB4PQ58FF6 505 aa5.85□□□□□ -1.47
GAPLINC-201ENST00000578664 PPP1R18Q6NYC8 613 aa5.85□□□□□ -1.47
GAPLINC-201ENST00000578664 PHTF2Q8N3S3 785 aa5.85□□□□□ -1.47
GAPLINC-201ENST00000578664 PMFBP1Q8TBY8 1022 aa5.85□□□□□ -1.47
GAPLINC-201ENST00000578664 CITED4Q96RK1 184 aa5.85□□□□□ -1.47
GAPLINC-201ENST00000578664 UBA5Q9GZZ9 404 aa5.85□□□□□ -1.47
GAPLINC-201ENST00000578664 ACBD3Q9H3P7 528 aa5.85□□□□□ -1.47
GAPLINC-201ENST00000578664 MRS2Q9HD23 443 aa5.85□□□□□ -1.47
GAPLINC-201ENST00000578664 CEP126Q9P2H0 1117 aa5.85□□□□□ -1.47
GAPLINC-201ENST00000578664 RNF223E7ERA6 249 aa5.84□□□□□ -1.47
GAPLINC-201ENST00000578664 TREHO43280 583 aa5.84□□□□□ -1.47
GAPLINC-201ENST00000578664 PRPF40AO75400 957 aaKnown RBP5.84□□□□□ -1.47
GAPLINC-201ENST00000578664 DKK1O94907 266 aa5.84□□□□□ -1.47
GAPLINC-201ENST00000578664 NPR3P17342 541 aa5.84□□□□□ -1.47
GAPLINC-201ENST00000578664 DNAJA1P31689 397 aaKnown RBP5.84□□□□□ -1.47
GAPLINC-201ENST00000578664 DAB2P98082 770 aa5.84□□□□□ -1.47
GAPLINC-201ENST00000578664 FMR1Q06787 632 aaKnown RBP eCLIP5.84□□□□□ -1.47
GAPLINC-201ENST00000578664 NFE2L2Q16236 605 aa5.84□□□□□ -1.47
GAPLINC-201ENST00000578664 SLFNL1Q499Z3 407 aa5.84□□□□□ -1.47
GAPLINC-201ENST00000578664 VPS37DQ86XT2 251 aa5.84□□□□□ -1.47
GAPLINC-201ENST00000578664 SIX5Q8N196 739 aa5.84□□□□□ -1.47
GAPLINC-201ENST00000578664 NUDT12Q9BQG2 462 aa5.84□□□□□ -1.47
GAPLINC-201ENST00000578664 DNAAF2Q9NVR5 837 aaKnown RBP5.84□□□□□ -1.47
GAPLINC-201ENST00000578664 PLA2G2EQ9NZK7 142 aa5.84□□□□□ -1.47
GAPLINC-201ENST00000578664 PARP2Q9UGN5 583 aa5.84□□□□□ -1.47
GAPLINC-201ENST00000578664 DNMT3AQ9Y6K1 912 aaPredicted RBP5.84□□□□□ -1.47
GAPLINC-201ENST00000578664 PRMT3O60678 531 aa5.83□□□□□ -1.48
GAPLINC-201ENST00000578664 SEC13P55735 322 aa5.83□□□□□ -1.48
GAPLINC-201ENST00000578664 CLDN10P78369 228 aa5.83□□□□□ -1.48
GAPLINC-201ENST00000578664 KCNH2Q12809 1159 aa5.83□□□□□ -1.48
GAPLINC-201ENST00000578664 EML3Q32P44 896 aa5.83□□□□□ -1.48
GAPLINC-201ENST00000578664 PTCRAQ6ISU1 281 aaPredicted RBP5.83□□□□□ -1.48
GAPLINC-201ENST00000578664 TMC7Q7Z402 723 aa5.83□□□□□ -1.48
GAPLINC-201ENST00000578664 JAZF1Q86VZ6 243 aa5.83□□□□□ -1.48
GAPLINC-201ENST00000578664 TEX2Q8IWB9 1127 aa5.83□□□□□ -1.48
GAPLINC-201ENST00000578664 CCAR1Q8IX12 1150 aaKnown RBP5.83□□□□□ -1.48
GAPLINC-201ENST00000578664 ANKLE1Q8NAG6 615 aa5.83□□□□□ -1.48
GAPLINC-201ENST00000578664 PLPP7Q8NBV4 271 aa5.83□□□□□ -1.48
GAPLINC-201ENST00000578664 PCDH12Q9NPG4 1184 aa5.83□□□□□ -1.48
GAPLINC-201ENST00000578664 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.83□□□□□ -1.48
GAPLINC-201ENST00000578664 COL4A3BPQ9Y5P4 624 aa5.83□□□□□ -1.48
GAPLINC-201ENST00000578664 PPEF1O14829 653 aaPredicted RBP5.82□□□□□ -1.48
GAPLINC-201ENST00000578664 ZBTB7BO15156 539 aaPredicted RBP5.82□□□□□ -1.48
GAPLINC-201ENST00000578664 PTCD1O75127 700 aaKnown RBP5.82□□□□□ -1.48
GAPLINC-201ENST00000578664 PEX14O75381 377 aa5.82□□□□□ -1.48
GAPLINC-201ENST00000578664 XRCC5P13010 732 aaKnown RBP5.82□□□□□ -1.48
GAPLINC-201ENST00000578664 PLCB3Q01970 1234 aa5.82□□□□□ -1.48
GAPLINC-201ENST00000578664 DSC3Q14574 896 aa5.82□□□□□ -1.48
GAPLINC-201ENST00000578664 PLA2G2CQ5R387 149 aa5.82□□□□□ -1.48
GAPLINC-201ENST00000578664 PRIMPOLQ96LW4 560 aa5.82□□□□□ -1.48
GAPLINC-201ENST00000578664 IFT57Q9NWB7 429 aa5.82□□□□□ -1.48
GAPLINC-201ENST00000578664 MAP10Q9P2G4 905 aa5.82□□□□□ -1.48
GAPLINC-201ENST00000578664 FCF1Q9Y324 198 aaKnown RBP5.82□□□□□ -1.48
GAPLINC-201ENST00000578664 A0A0G2JS52 829 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms