RNA–Protein interactions for RNA: ENST00000578658.1

TRAPPC8-205, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-205ENST00000578658 ATP1A2P50993 1020 aa8.4□□□□□ -1.06
TRAPPC8-205ENST00000578658 PSME1Q06323 249 aa8.4□□□□□ -1.06
TRAPPC8-205ENST00000578658 TLR1Q15399 786 aa8.4□□□□□ -1.06
TRAPPC8-205ENST00000578658 WDR44Q5JSH3 913 aa8.4□□□□□ -1.06
TRAPPC8-205ENST00000578658 CFAP70Q5T0N1 1121 aa8.4□□□□□ -1.06
TRAPPC8-205ENST00000578658 SLC4A9Q96Q91 983 aa8.4□□□□□ -1.06
TRAPPC8-205ENST00000578658 ZSCAN10Q96SZ4 725 aaPredicted RBP8.4□□□□□ -1.06
TRAPPC8-205ENST00000578658 SMTNP53814 917 aa8.39□□□□□ -1.07
TRAPPC8-205ENST00000578658 TAS1R3Q7RTX0 852 aa8.39□□□□□ -1.07
TRAPPC8-205ENST00000578658 OGFOD1Q8N543 542 aa8.39□□□□□ -1.07
TRAPPC8-205ENST00000578658 IRF7Q92985 503 aa8.39□□□□□ -1.07
TRAPPC8-205ENST00000578658 DNAAF2Q9NVR5 837 aaKnown RBP8.39□□□□□ -1.07
TRAPPC8-205ENST00000578658 ERBB4Q15303 1308 aa8.38□□□□□ -1.07
TRAPPC8-205ENST00000578658 VSIG8P0DPA2 414 aa8.38□□□□□ -1.07
TRAPPC8-205ENST00000578658 LMOD1P29536 600 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC8-205ENST00000578658 KANK4Q5T7N3 995 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC8-205ENST00000578658 PPARGC1BQ86YN6 1023 aaKnown RBP8.38□□□□□ -1.07
TRAPPC8-205ENST00000578658 LARGE2Q8N3Y3 721 aa8.38□□□□□ -1.07
TRAPPC8-205ENST00000578658 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.38□□□□□ -1.07
TRAPPC8-205ENST00000578658 TPCN2Q8NHX9 752 aa8.38□□□□□ -1.07
TRAPPC8-205ENST00000578658 ZNF358Q9NW07 568 aa8.38□□□□□ -1.07
TRAPPC8-205ENST00000578658 SERTAD1Q9UHV2 236 aa8.38□□□□□ -1.07
TRAPPC8-205ENST00000578658 DKK1O94907 266 aa8.37□□□□□ -1.07
TRAPPC8-205ENST00000578658 ITGA6P23229 1130 aa8.37□□□□□ -1.07
TRAPPC8-205ENST00000578658 MTFR1Q15390 333 aa8.37□□□□□ -1.07
TRAPPC8-205ENST00000578658 GNASQ5JWF2 1037 aa8.37□□□□□ -1.07
TRAPPC8-205ENST00000578658 CCDC102BQ68D86 513 aa8.37□□□□□ -1.07
TRAPPC8-205ENST00000578658 TMEM214Q6NUQ4 689 aaKnown RBP8.37□□□□□ -1.07
TRAPPC8-205ENST00000578658 SIX5Q8N196 739 aa8.37□□□□□ -1.07
TRAPPC8-205ENST00000578658 DYRK1BQ9Y463 629 aa8.37□□□□□ -1.07
TRAPPC8-205ENST00000578658 A6NJY4 79 aa8.36□□□□□ -1.07
TRAPPC8-205ENST00000578658 BACH1O14867 736 aa8.36□□□□□ -1.07
TRAPPC8-205ENST00000578658 RASA1P20936 1047 aa8.36□□□□□ -1.07
TRAPPC8-205ENST00000578658 GTF2E1P29083 439 aaPredicted RBP8.36□□□□□ -1.07
TRAPPC8-205ENST00000578658 C4orf17Q53FE4 359 aa8.36□□□□□ -1.07
TRAPPC8-205ENST00000578658 RHBDD1Q8TEB9 315 aa8.36□□□□□ -1.07
TRAPPC8-205ENST00000578658 TIMMDC1Q9NPL8 285 aa8.36□□□□□ -1.07
TRAPPC8-205ENST00000578658 IQSEC3Q9UPP2 1182 aaPredicted RBP8.36□□□□□ -1.07
TRAPPC8-205ENST00000578658 ARID3CA6NKF2 412 aa8.35□□□□□ -1.07
TRAPPC8-205ENST00000578658 CDK2AP1O14519 115 aa8.35□□□□□ -1.07
TRAPPC8-205ENST00000578658 ZNF295-AS1Q8N0V1 137 aa8.35□□□□□ -1.07
TRAPPC8-205ENST00000578658 NANOS1Q8WY41 292 aaKnown RBP8.35□□□□□ -1.07
TRAPPC8-205ENST00000578658 ZNF594Q96JF6 807 aaPredicted RBP8.35□□□□□ -1.07
TRAPPC8-205ENST00000578658 PHKA2P46019 1235 aa8.34□□□□□ -1.07
TRAPPC8-205ENST00000578658 EPHA4P54764 986 aa8.34□□□□□ -1.07
TRAPPC8-205ENST00000578658 CRTC2Q53ET0 693 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC8-205ENST00000578658 VRTNQ9H8Y1 702 aa8.34□□□□□ -1.07
TRAPPC8-205ENST00000578658 CUEDC1Q9NWM3 386 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC8-205ENST00000578658 USP3Q9Y6I4 520 aa8.34□□□□□ -1.07
TRAPPC8-205ENST00000578658 M0R2N6 131 aa8.33□□□□□ -1.08
TRAPPC8-205ENST00000578658 WIPF1O43516 503 aa8.33□□□□□ -1.08
TRAPPC8-205ENST00000578658 GMPRP36959 345 aa8.33□□□□□ -1.08
TRAPPC8-205ENST00000578658 FOXK2Q01167 660 aa8.33□□□□□ -1.08
TRAPPC8-205ENST00000578658 PTK7Q13308 1070 aa8.33□□□□□ -1.08
TRAPPC8-205ENST00000578658 LARP1Q6PKG0 1096 aaKnown RBP8.33□□□□□ -1.08
TRAPPC8-205ENST00000578658 SCHIP1Q9P0W5 487 aaPredicted RBP8.33□□□□□ -1.08
TRAPPC8-205ENST00000578658 A0A1B0GTH6 734 aa8.32□□□□□ -1.08
TRAPPC8-205ENST00000578658 FAM196BA6NMK8 535 aa8.32□□□□□ -1.08
TRAPPC8-205ENST00000578658 USP17L15C9J2P7 530 aa8.32□□□□□ -1.08
TRAPPC8-205ENST00000578658 USP17L10C9JJH3 530 aa8.32□□□□□ -1.08
TRAPPC8-205ENST00000578658 USP17L13C9JLJ4 530 aa8.32□□□□□ -1.08
TRAPPC8-205ENST00000578658 USP17L12C9JPN9 530 aa8.32□□□□□ -1.08
TRAPPC8-205ENST00000578658 USP17L11C9JVI0 530 aa8.32□□□□□ -1.08
TRAPPC8-205ENST00000578658 USP17L21D6R901 530 aa8.32□□□□□ -1.08
TRAPPC8-205ENST00000578658 USP17L18D6R9N7 530 aa8.32□□□□□ -1.08
TRAPPC8-205ENST00000578658 USP17L22D6RA61 530 aa8.32□□□□□ -1.08
TRAPPC8-205ENST00000578658 USP17L17D6RBQ6 530 aa8.32□□□□□ -1.08
TRAPPC8-205ENST00000578658 USP17L19D6RCP7 530 aa8.32□□□□□ -1.08
TRAPPC8-205ENST00000578658 USP17L20D6RJB6 530 aa8.32□□□□□ -1.08
TRAPPC8-205ENST00000578658 USP17L24Q0WX57 530 aa8.32□□□□□ -1.08
TRAPPC8-205ENST00000578658 ERICH6Q7L0X2 663 aa8.32□□□□□ -1.08
TRAPPC8-205ENST00000578658 NIFKQ9BYG3 293 aaKnown RBP8.32□□□□□ -1.08
TRAPPC8-205ENST00000578658 SFI1A8K8P3 1242 aa8.31□□□□□ -1.08
TRAPPC8-205ENST00000578658 F11P03951 625 aa8.31□□□□□ -1.08
TRAPPC8-205ENST00000578658 RFX1P22670 979 aa8.31□□□□□ -1.08
TRAPPC8-205ENST00000578658 PLA2G4AP47712 749 aa8.31□□□□□ -1.08
TRAPPC8-205ENST00000578658 TRIM22Q8IYM9 498 aa8.31□□□□□ -1.08
TRAPPC8-205ENST00000578658 TNS4Q8IZW8 715 aa8.31□□□□□ -1.08
TRAPPC8-205ENST00000578658 VWA5B2Q8N398 1253 aa8.31□□□□□ -1.08
TRAPPC8-205ENST00000578658 GPR161Q8N6U8 529 aaKnown RBP8.31□□□□□ -1.08
TRAPPC8-205ENST00000578658 CCDC97Q96F63 343 aaPredicted RBP8.31□□□□□ -1.08
TRAPPC8-205ENST00000578658 GAS2L1Q99501 681 aaPredicted RBP8.31□□□□□ -1.08
TRAPPC8-205ENST00000578658 SERPINA10Q9UK55 444 aa8.31□□□□□ -1.08
TRAPPC8-205ENST00000578658 CDC14CA4D256 554 aa8.3□□□□□ -1.08
TRAPPC8-205ENST00000578658 SEC13P55735 322 aa8.3□□□□□ -1.08
TRAPPC8-205ENST00000578658 SRPK2P78362 688 aaKnown RBP8.3□□□□□ -1.08
TRAPPC8-205ENST00000578658 DBN1Q16643 649 aa8.3□□□□□ -1.08
TRAPPC8-205ENST00000578658 RIPOR1Q6ZS17 1223 aa8.3□□□□□ -1.08
TRAPPC8-205ENST00000578658 SV2AQ7L0J3 742 aa8.3□□□□□ -1.08
TRAPPC8-205ENST00000578658 ZNF837Q96EG3 531 aaPredicted RBP8.3□□□□□ -1.08
TRAPPC8-205ENST00000578658 GMCL1Q96IK5 515 aa8.3□□□□□ -1.08
TRAPPC8-205ENST00000578658 C1orf115Q9H7X2 142 aa8.3□□□□□ -1.08
TRAPPC8-205ENST00000578658 RBM19Q9Y4C8 960 aaKnown RBP8.3□□□□□ -1.08
TRAPPC8-205ENST00000578658 MSX1P28360 303 aa8.29□□□□□ -1.08
TRAPPC8-205ENST00000578658 DPYDQ12882 1025 aa8.29□□□□□ -1.08
TRAPPC8-205ENST00000578658 ANKMY2Q8IV38 441 aa8.29□□□□□ -1.08
TRAPPC8-205ENST00000578658 SLC9A9Q8IVB4 645 aa8.29□□□□□ -1.08
TRAPPC8-205ENST00000578658 TSEN2Q8NCE0 465 aaKnown RBP8.29□□□□□ -1.08
TRAPPC8-205ENST00000578658 ARXQ96QS3 562 aa8.29□□□□□ -1.08
TRAPPC8-205ENST00000578658 H7C1W4 665 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 180.9 ms