RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 MPRIPQ6WCQ1 1025 aa17.37■□□□□ 0.37
SRSF1-202ENST00000578430 TSR2Q969E8 191 aaKnown RBP17.37■□□□□ 0.37
SRSF1-202ENST00000578430 ZNF428Q96B54 188 aa17.37■□□□□ 0.37
SRSF1-202ENST00000578430 LGR6Q9HBX8 967 aa17.37■□□□□ 0.37
SRSF1-202ENST00000578430 MBIPQ9NS73 344 aa17.37■□□□□ 0.37
SRSF1-202ENST00000578430 TNS2Q63HR2 1409 aa17.37■□□□□ 0.37
SRSF1-202ENST00000578430 SCN11AQ9UI33 1791 aa17.36■□□□□ 0.37
SRSF1-202ENST00000578430 C1QBPQ07021 282 aaKnown RBP17.36■□□□□ 0.37
SRSF1-202ENST00000578430 SHANK3Q9BYB0 1731 aa17.35■□□□□ 0.37
SRSF1-202ENST00000578430 TSPYL4Q9UJ04 414 aa17.35■□□□□ 0.37
SRSF1-202ENST00000578430 KDM6AO15550 1401 aaPredicted RBP17.35■□□□□ 0.37
SRSF1-202ENST00000578430 MRC1P22897 1456 aa17.35■□□□□ 0.37
SRSF1-202ENST00000578430 ERVV-2B6SEH9 535 aa17.34■□□□□ 0.37
SRSF1-202ENST00000578430 EXOSC9Q06265 439 aaKnown RBP17.34■□□□□ 0.37
SRSF1-202ENST00000578430 SOS1Q07889 1333 aaPredicted RBP17.34■□□□□ 0.37
SRSF1-202ENST00000578430 DDB1Q16531 1140 aa17.34■□□□□ 0.37
SRSF1-202ENST00000578430 VIRMAQ69YN4 1812 aaKnown RBP17.34■□□□□ 0.37
SRSF1-202ENST00000578430 RNF123Q5XPI4 1314 aa17.33■□□□□ 0.36
SRSF1-202ENST00000578430 DDX54Q8TDD1 881 aaKnown RBP17.33■□□□□ 0.36
SRSF1-202ENST00000578430 GJD4Q96KN9 370 aaPredicted RBP17.33■□□□□ 0.36
SRSF1-202ENST00000578430 SLC52A2Q9HAB3 445 aa17.33■□□□□ 0.36
SRSF1-202ENST00000578430 SUPT16HQ9Y5B9 1047 aaKnown RBP17.33■□□□□ 0.36
SRSF1-202ENST00000578430 SIPA1L3O60292 1781 aaPredicted RBP17.32■□□□□ 0.36
SRSF1-202ENST00000578430 BTBD11A6QL63 1104 aa17.31■□□□□ 0.36
SRSF1-202ENST00000578430 ONECUT3O60422 494 aaPredicted RBP17.3■□□□□ 0.36
SRSF1-202ENST00000578430 CABP4P57796 275 aa17.3■□□□□ 0.36
SRSF1-202ENST00000578430 FAM98CQ17RN3 349 aaKnown RBP17.3■□□□□ 0.36
SRSF1-202ENST00000578430 CHMP4AQ9BY43 222 aa17.3■□□□□ 0.36
SRSF1-202ENST00000578430 GLI3P10071 1580 aa17.29■□□□□ 0.36
SRSF1-202ENST00000578430 RARSP54136 660 aaKnown RBP17.29■□□□□ 0.36
SRSF1-202ENST00000578430 TWISTNBQ3B726 338 aaPredicted RBP17.29■□□□□ 0.36
SRSF1-202ENST00000578430 ALDH1L2Q3SY69 923 aa17.29■□□□□ 0.36
SRSF1-202ENST00000578430 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.29■□□□□ 0.36
SRSF1-202ENST00000578430 KDM3BQ7LBC6 1761 aa17.29■□□□□ 0.36
SRSF1-202ENST00000578430 THSD7AQ9UPZ6 1657 aa17.29■□□□□ 0.36
SRSF1-202ENST00000578430 VAMP4O75379 141 aa17.28■□□□□ 0.36
SRSF1-202ENST00000578430 NEFLP07196 543 aa17.28■□□□□ 0.36
SRSF1-202ENST00000578430 MIS18AQ9NYP9 233 aa17.28■□□□□ 0.36
SRSF1-202ENST00000578430 HOXB7P09629 217 aa17.27■□□□□ 0.36
SRSF1-202ENST00000578430 C8orf58Q8NAV2 365 aa17.27■□□□□ 0.36
SRSF1-202ENST00000578430 NFATC2IPQ8NCF5 419 aa17.27■□□□□ 0.36
SRSF1-202ENST00000578430 RRP1P56182 461 aaKnown RBP17.26■□□□□ 0.35
SRSF1-202ENST00000578430 EIF4A1P60842 406 aaKnown RBP17.26■□□□□ 0.35
SRSF1-202ENST00000578430 BRWD3Q6RI45 1802 aa17.26■□□□□ 0.35
SRSF1-202ENST00000578430 BRPF1P55201 1214 aaPredicted RBP17.25■□□□□ 0.35
SRSF1-202ENST00000578430 ZNF790Q6PG37 636 aa17.25■□□□□ 0.35
SRSF1-202ENST00000578430 TSPYL6Q8N831 410 aa17.25■□□□□ 0.35
SRSF1-202ENST00000578430 MARCH10Q8NA82 808 aaPredicted RBP17.24■□□□□ 0.35
SRSF1-202ENST00000578430 TMOD3Q9NYL9 352 aa17.24■□□□□ 0.35
SRSF1-202ENST00000578430 A0A0G2JS52 829 aa17.23■□□□□ 0.35
SRSF1-202ENST00000578430 MYT1Q01538 1121 aa17.23■□□□□ 0.35
SRSF1-202ENST00000578430 CCDC125Q86Z20 511 aa17.23■□□□□ 0.35
SRSF1-202ENST00000578430 TTC5Q8N0Z6 440 aa17.23■□□□□ 0.35
SRSF1-202ENST00000578430 SMC4Q9NTJ3 1288 aa17.23■□□□□ 0.35
SRSF1-202ENST00000578430 TOGARAM1Q9Y4F4 1720 aa17.23■□□□□ 0.35
SRSF1-202ENST00000578430 HEG1Q9ULI3 1381 aa17.23■□□□□ 0.35
SRSF1-202ENST00000578430 ELL2O00472 640 aaPredicted RBP17.22■□□□□ 0.35
SRSF1-202ENST00000578430 SSH1Q8WYL5 1049 aa17.22■□□□□ 0.35
SRSF1-202ENST00000578430 KIF16BQ96L93 1317 aa17.21■□□□□ 0.35
SRSF1-202ENST00000578430 BCL9O00512 1426 aa17.21■□□□□ 0.35
SRSF1-202ENST00000578430 BCAR3O75815 825 aa17.21■□□□□ 0.35
SRSF1-202ENST00000578430 ERICH6BQ5W0A0 696 aa17.21■□□□□ 0.35
SRSF1-202ENST00000578430 IPO8O15397 1037 aaKnown RBP17.2■□□□□ 0.34
SRSF1-202ENST00000578430 KRT24Q2M2I5 525 aa17.2■□□□□ 0.34
SRSF1-202ENST00000578430 CCDC30Q5VVM6 783 aa17.2■□□□□ 0.34
SRSF1-202ENST00000578430 SEPT12Q8IYM1 358 aa17.2■□□□□ 0.34
SRSF1-202ENST00000578430 FMNL2Q96PY5 1086 aa17.2■□□□□ 0.34
SRSF1-202ENST00000578430 PAPPAQ13219 1627 aa17.2■□□□□ 0.34
SRSF1-202ENST00000578430 KCNQ3O43525 872 aa17.19■□□□□ 0.34
SRSF1-202ENST00000578430 GIGYF1O75420 1035 aaPredicted RBP17.19■□□□□ 0.34
SRSF1-202ENST00000578430 MS4A1P11836 297 aa17.19■□□□□ 0.34
SRSF1-202ENST00000578430 ITGB4P16144 1822 aa17.19■□□□□ 0.34
SRSF1-202ENST00000578430 SLC39A6Q13433 755 aa17.18■□□□□ 0.34
SRSF1-202ENST00000578430 PDE3AQ14432 1141 aa17.18■□□□□ 0.34
SRSF1-202ENST00000578430 MRPL50Q8N5N7 158 aaKnown RBP17.18■□□□□ 0.34
SRSF1-202ENST00000578430 PIGBQ92521 554 aa17.18■□□□□ 0.34
SRSF1-202ENST00000578430 STK31Q9BXU1 1019 aa17.18■□□□□ 0.34
SRSF1-202ENST00000578430 DOT1LQ8TEK3 1739 aa17.18■□□□□ 0.34
SRSF1-202ENST00000578430 SNRPA1P09661 255 aaKnown RBP17.17■□□□□ 0.34
SRSF1-202ENST00000578430 CANXP27824 592 aaKnown RBP17.17■□□□□ 0.34
SRSF1-202ENST00000578430 PRIM1P49642 420 aaKnown RBP17.17■□□□□ 0.34
SRSF1-202ENST00000578430 HDGFL1Q5TGJ6 251 aa17.17■□□□□ 0.34
SRSF1-202ENST00000578430 ZKSCAN2Q63HK3 967 aa17.17■□□□□ 0.34
SRSF1-202ENST00000578430 ARHGAP45Q92619 1136 aa17.17■□□□□ 0.34
SRSF1-202ENST00000578430 BCL2L13Q9BXK5 485 aa17.17■□□□□ 0.34
SRSF1-202ENST00000578430 UBR2Q8IWV8 1755 aa17.17■□□□□ 0.34
SRSF1-202ENST00000578430 NPM3O75607 178 aaKnown RBP17.16■□□□□ 0.34
SRSF1-202ENST00000578430 DEFB132Q7Z7B7 95 aa17.16■□□□□ 0.34
SRSF1-202ENST00000578430 ZNF496Q96IT1 587 aaPredicted RBP17.16■□□□□ 0.34
SRSF1-202ENST00000578430 GTF3C3Q9Y5Q9 886 aa17.16■□□□□ 0.34
SRSF1-202ENST00000578430 CACNA1FO60840 1977 aa17.16■□□□□ 0.34
SRSF1-202ENST00000578430 FKBP8Q14318 412 aa17.15■□□□□ 0.34
SRSF1-202ENST00000578430 VSIG10Q8N0Z9 540 aa17.15■□□□□ 0.34
SRSF1-202ENST00000578430 FRAT1Q92837 279 aaPredicted RBP17.15■□□□□ 0.34
SRSF1-202ENST00000578430 KCPQ6ZWJ8 1503 aa17.15■□□□□ 0.34
SRSF1-202ENST00000578430 PLIN1O60240 522 aa17.14■□□□□ 0.33
SRSF1-202ENST00000578430 SMARCC1Q92922 1105 aaPredicted RBP17.14■□□□□ 0.33
SRSF1-202ENST00000578430 SYTL4Q96C24 671 aaPredicted RBP17.14■□□□□ 0.33
SRSF1-202ENST00000578430 TEX13AQ9BXU3 409 aaPredicted RBP17.14■□□□□ 0.33
SRSF1-202ENST00000578430 ATG3Q9NT62 314 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms