RNA–Protein interactions for RNA: ENST00000578411.1

SSH2-207, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 2

Gene SSH2, Length 633 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-207ENST00000578411 AMPHP49418 695 aa17.06■□□□□ 0.32
SSH2-207ENST00000578411 LINC00116Q8NCU8 138 aa17.06■□□□□ 0.32
SSH2-207ENST00000578411 RAPGEF4Q8WZA2 1011 aa17.06■□□□□ 0.32
SSH2-207ENST00000578411 GNPATO15228 680 aa17.05■□□□□ 0.32
SSH2-207ENST00000578411 USHBP1Q8N6Y0 703 aa17.05■□□□□ 0.32
SSH2-207ENST00000578411 TMC1Q8TDI8 760 aa17.05■□□□□ 0.32
SSH2-207ENST00000578411 RRAGCQ9HB90 399 aa17.05■□□□□ 0.32
SSH2-207ENST00000578411 DPEP1P16444 411 aa17.04■□□□□ 0.32
SSH2-207ENST00000578411 RNF181Q9P0P0 153 aa17.04■□□□□ 0.32
SSH2-207ENST00000578411 TATP17735 454 aaPredicted RBP17.03■□□□□ 0.32
SSH2-207ENST00000578411 NBPF6Q5VWK0 638 aa17.03■□□□□ 0.32
SSH2-207ENST00000578411 NBPF4Q96M43 638 aa17.03■□□□□ 0.32
SSH2-207ENST00000578411 LOC102724428A0A0B4J2F2 783 aa17.02■□□□□ 0.32
SSH2-207ENST00000578411 SIK1P57059 783 aa17.02■□□□□ 0.32
SSH2-207ENST00000578411 TERF2IPQ9NYB0 399 aa17.02■□□□□ 0.32
SSH2-207ENST00000578411 SBF1O95248 1867 aa17.01■□□□□ 0.31
SSH2-207ENST00000578411 CCDC87Q9NVE4 849 aa17.01■□□□□ 0.31
SSH2-207ENST00000578411 TIAM2Q8IVF5 1701 aa17.01■□□□□ 0.31
SSH2-207ENST00000578411 COG3Q96JB2 828 aa17■□□□□ 0.31
SSH2-207ENST00000578411 SLC12A5Q9H2X9 1139 aa17■□□□□ 0.31
SSH2-207ENST00000578411 CYP27B1O15528 508 aa16.99■□□□□ 0.31
SSH2-207ENST00000578411 PIGBQ92521 554 aa16.99■□□□□ 0.31
SSH2-207ENST00000578411 DCAF5Q96JK2 942 aa16.99■□□□□ 0.31
SSH2-207ENST00000578411 ITPK1Q13572 414 aa16.98■□□□□ 0.31
SSH2-207ENST00000578411 COL5A3P25940 1745 aaPredicted RBP16.97■□□□□ 0.31
SSH2-207ENST00000578411 FBLN1P23142 703 aa16.97■□□□□ 0.31
SSH2-207ENST00000578411 TMF1P82094 1093 aa16.97■□□□□ 0.31
SSH2-207ENST00000578411 NLGN1Q8N2Q7 840 aa16.97■□□□□ 0.31
SSH2-207ENST00000578411 PCDH10Q9P2E7 1040 aa16.97■□□□□ 0.31
SSH2-207ENST00000578411 ZC3H4Q9UPT8 1303 aaKnown RBP16.96■□□□□ 0.31
SSH2-207ENST00000578411 KCNA3P22001 575 aa16.96■□□□□ 0.31
SSH2-207ENST00000578411 L3MBTL2Q969R5 705 aa16.96■□□□□ 0.31
SSH2-207ENST00000578411 KDRP35968 1356 aa16.95■□□□□ 0.3
SSH2-207ENST00000578411 ATP6V1AP38606 617 aa16.95■□□□□ 0.3
SSH2-207ENST00000578411 DALRD3Q5D0E6 543 aaKnown RBP16.95■□□□□ 0.3
SSH2-207ENST00000578411 PIM2Q9P1W9 311 aa16.95■□□□□ 0.3
SSH2-207ENST00000578411 PARP3Q9Y6F1 533 aa16.95■□□□□ 0.3
SSH2-207ENST00000578411 ZNF831Q5JPB2 1677 aa16.94■□□□□ 0.3
SSH2-207ENST00000578411 RRS1Q15050 365 aaKnown RBP16.94■□□□□ 0.3
SSH2-207ENST00000578411 RTCBQ9Y3I0 505 aaKnown RBP16.94■□□□□ 0.3
SSH2-207ENST00000578411 KDM6AO15550 1401 aaPredicted RBP16.94■□□□□ 0.3
SSH2-207ENST00000578411 TRAPPC3LQ5T215 181 aa16.93■□□□□ 0.3
SSH2-207ENST00000578411 TMOD3Q9NYL9 352 aa16.93■□□□□ 0.3
SSH2-207ENST00000578411 INSRP06213 1382 aa16.92■□□□□ 0.3
SSH2-207ENST00000578411 GYS1P13807 737 aa16.92■□□□□ 0.3
SSH2-207ENST00000578411 FAM161AQ3B820 660 aa16.92■□□□□ 0.3
SSH2-207ENST00000578411 ASAP1Q9ULH1 1129 aa16.92■□□□□ 0.3
SSH2-207ENST00000578411 FOXN1O15353 648 aa16.91■□□□□ 0.3
SSH2-207ENST00000578411 VEGFAP15692 232 aaPredicted RBP16.91■□□□□ 0.3
SSH2-207ENST00000578411 RASSF7Q02833 373 aa16.91■□□□□ 0.3
SSH2-207ENST00000578411 PRDM10Q9NQV6 1147 aa16.91■□□□□ 0.3
SSH2-207ENST00000578411 FLT4P35916 1363 aa16.9■□□□□ 0.3
SSH2-207ENST00000578411 NKX1-1Q15270 411 aaPredicted RBP16.9■□□□□ 0.3
SSH2-207ENST00000578411 MKRN1Q9UHC7 482 aaKnown RBP16.9■□□□□ 0.3
SSH2-207ENST00000578411 KIF20BQ96Q89 1820 aa16.89■□□□□ 0.29
SSH2-207ENST00000578411 NCAPD2Q15021 1401 aa16.89■□□□□ 0.29
SSH2-207ENST00000578411 GLTPD2A6NH11 291 aa16.89■□□□□ 0.29
SSH2-207ENST00000578411 ARHGEF1Q92888 912 aaKnown RBP16.89■□□□□ 0.29
SSH2-207ENST00000578411 DLEC1Q9Y238 1755 aa16.89■□□□□ 0.29
SSH2-207ENST00000578411 RFC4P35249 363 aa16.88■□□□□ 0.29
SSH2-207ENST00000578411 CREBZFQ9NS37 354 aa16.88■□□□□ 0.29
SSH2-207ENST00000578411 CNTNAP4Q9C0A0 1308 aa16.88■□□□□ 0.29
SSH2-207ENST00000578411 CHRNA5P30532 468 aa16.87■□□□□ 0.29
SSH2-207ENST00000578411 HSP90AB2PQ58FF8 381 aa16.87■□□□□ 0.29
SSH2-207ENST00000578411 AIDAQ96BJ3 306 aa16.87■□□□□ 0.29
SSH2-207ENST00000578411 KIF24Q5T7B8 1368 aa16.87■□□□□ 0.29
SSH2-207ENST00000578411 LMNB1P20700 586 aa16.86■□□□□ 0.29
SSH2-207ENST00000578411 ATG3Q9NT62 314 aa16.86■□□□□ 0.29
SSH2-207ENST00000578411 SPG7Q9UQ90 795 aa16.86■□□□□ 0.29
SSH2-207ENST00000578411 CTCFP49711 727 aaPredicted RBP16.85■□□□□ 0.29
SSH2-207ENST00000578411 PUS7Q96PZ0 661 aaKnown RBP16.85■□□□□ 0.29
SSH2-207ENST00000578411 CNTNAP1P78357 1384 aa16.85■□□□□ 0.29
SSH2-207ENST00000578411 CCDC88AQ3V6T2 1871 aa16.84■□□□□ 0.29
SSH2-207ENST00000578411 MYH14Q7Z406 1995 aaKnown RBP16.84■□□□□ 0.29
SSH2-207ENST00000578411 DDR1Q08345 913 aa16.84■□□□□ 0.29
SSH2-207ENST00000578411 ANKRD26Q9UPS8 1709 aa16.84■□□□□ 0.29
SSH2-207ENST00000578411 RC3H1Q5TC82 1133 aaKnown RBP16.83■□□□□ 0.28
SSH2-207ENST00000578411 ABHD8Q96I13 439 aa16.83■□□□□ 0.28
SSH2-207ENST00000578411 CARD11Q9BXL7 1154 aa16.83■□□□□ 0.28
SSH2-207ENST00000578411 GGNBP2Q9H3C7 697 aa16.83■□□□□ 0.28
SSH2-207ENST00000578411 RPS6KA4O75676 772 aa16.82■□□□□ 0.28
SSH2-207ENST00000578411 SLC4A9Q96Q91 983 aa16.82■□□□□ 0.28
SSH2-207ENST00000578411 VIRMAQ69YN4 1812 aaKnown RBP16.82■□□□□ 0.28
SSH2-207ENST00000578411 USP42Q9H9J4 1324 aaKnown RBP16.81■□□□□ 0.28
SSH2-207ENST00000578411 RBM42Q9BTD8 480 aaKnown RBP16.81■□□□□ 0.28
SSH2-207ENST00000578411 SRP68Q9UHB9 627 aaKnown RBP16.81■□□□□ 0.28
SSH2-207ENST00000578411 TJP1Q07157 1748 aa16.8■□□□□ 0.28
SSH2-207ENST00000578411 PHKG2P15735 406 aa16.8■□□□□ 0.28
SSH2-207ENST00000578411 FKBP8Q14318 412 aa16.8■□□□□ 0.28
SSH2-207ENST00000578411 CHADLQ6NUI6 762 aa16.8■□□□□ 0.28
SSH2-207ENST00000578411 ADAMTS7Q9UKP4 1686 aa16.8■□□□□ 0.28
SSH2-207ENST00000578411 POTECB2RU33 542 aa16.79■□□□□ 0.28
SSH2-207ENST00000578411 LBX1P52954 281 aa16.79■□□□□ 0.28
SSH2-207ENST00000578411 MLLT1Q03111 559 aaPredicted RBP16.79■□□□□ 0.28
SSH2-207ENST00000578411 IFNL2Q8IZJ0 200 aa16.79■□□□□ 0.28
SSH2-207ENST00000578411 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.79■□□□□ 0.28
SSH2-207ENST00000578411 AFDNP55196 1824 aaKnown RBP16.79■□□□□ 0.28
SSH2-207ENST00000578411 NRXN2Q9P2S2 1712 aa16.79■□□□□ 0.28
SSH2-207ENST00000578411 TONSLQ96HA7 1378 aa16.78■□□□□ 0.28
SSH2-207ENST00000578411 POLRMTO00411 1230 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms