RNA–Protein interactions for RNA: ENST00000578329.1

PPP4R1-209, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 350 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-209ENST00000578329 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.19□□□□□ -1.42
PPP4R1-209ENST00000578329 CDCA8Q53HL2 280 aa6.19□□□□□ -1.42
PPP4R1-209ENST00000578329 SCN11AQ9UI33 1791 aa6.18□□□□□ -1.42
PPP4R1-209ENST00000578329 CEP350Q5VT06 3117 aa6.18□□□□□ -1.42
PPP4R1-209ENST00000578329 PXDNLA1KZ92 1463 aa6.18□□□□□ -1.42
PPP4R1-209ENST00000578329 EIF4G2P78344 907 aaKnown RBP eCLIP6.18□□□□□ -1.42
PPP4R1-209ENST00000578329 PLEKHG2Q9H7P9 1386 aa6.18□□□□□ -1.42
PPP4R1-209ENST00000578329 BRCA1P38398 1863 aaKnown RBP6.17□□□□□ -1.42
PPP4R1-209ENST00000578329 MRC1P22897 1456 aa6.17□□□□□ -1.42
PPP4R1-209ENST00000578329 N4BP2Q86UW6 1770 aaPredicted RBP6.17□□□□□ -1.42
PPP4R1-209ENST00000578329 KCPQ6ZWJ8 1503 aa6.17□□□□□ -1.42
PPP4R1-209ENST00000578329 KCNA3P22001 575 aa6.17□□□□□ -1.42
PPP4R1-209ENST00000578329 IFNL2Q8IZJ0 200 aa6.17□□□□□ -1.42
PPP4R1-209ENST00000578329 LGR6Q9HBX8 967 aa6.17□□□□□ -1.42
PPP4R1-209ENST00000578329 SPG7Q9UQ90 795 aa6.17□□□□□ -1.42
PPP4R1-209ENST00000578329 VIRMAQ69YN4 1812 aaKnown RBP6.17□□□□□ -1.42
PPP4R1-209ENST00000578329 C10orf71Q711Q0 1435 aa6.16□□□□□ -1.42
PPP4R1-209ENST00000578329 PHF14O94880 888 aa6.16□□□□□ -1.42
PPP4R1-209ENST00000578329 SSFA2P28290 1259 aa6.16□□□□□ -1.42
PPP4R1-209ENST00000578329 DDR1Q08345 913 aa6.16□□□□□ -1.42
PPP4R1-209ENST00000578329 INTS5Q6P9B9 1019 aaKnown RBP6.16□□□□□ -1.42
PPP4R1-209ENST00000578329 ARHGEF1Q92888 912 aaKnown RBP6.16□□□□□ -1.42
PPP4R1-209ENST00000578329 SMARCC1Q92922 1105 aaPredicted RBP6.16□□□□□ -1.42
PPP4R1-209ENST00000578329 POLR3GLQ9BT43 218 aa6.16□□□□□ -1.42
PPP4R1-209ENST00000578329 TMOD3Q9NYL9 352 aa6.16□□□□□ -1.42
PPP4R1-209ENST00000578329 WWC3Q9ULE0 1092 aa6.16□□□□□ -1.42
PPP4R1-209ENST00000578329 CD2APQ9Y5K6 639 aa6.16□□□□□ -1.42
PPP4R1-209ENST00000578329 UBR2Q8IWV8 1755 aa6.16□□□□□ -1.42
PPP4R1-209ENST00000578329 ERVV-2B6SEH9 535 aa6.15□□□□□ -1.42
PPP4R1-209ENST00000578329 GNPATO15228 680 aa6.15□□□□□ -1.42
PPP4R1-209ENST00000578329 GYS1P13807 737 aa6.15□□□□□ -1.42
PPP4R1-209ENST00000578329 POLD1P28340 1107 aa6.15□□□□□ -1.42
PPP4R1-209ENST00000578329 ATP6V1AP38606 617 aa6.15□□□□□ -1.42
PPP4R1-209ENST00000578329 MTHFSP49914 203 aa6.15□□□□□ -1.42
PPP4R1-209ENST00000578329 PRELPP51888 382 aa6.15□□□□□ -1.42
PPP4R1-209ENST00000578329 C1QTNF8P60827 252 aa6.15□□□□□ -1.42
PPP4R1-209ENST00000578329 GPR162Q16538 588 aa6.15□□□□□ -1.42
PPP4R1-209ENST00000578329 SULT6B1Q6IMI4 303 aa6.15□□□□□ -1.42
PPP4R1-209ENST00000578329 ZNF530Q6P9A1 599 aaPredicted RBP6.15□□□□□ -1.42
PPP4R1-209ENST00000578329 KLHL34Q8N239 644 aa6.15□□□□□ -1.42
PPP4R1-209ENST00000578329 NFATC2IPQ8NCF5 419 aa6.15□□□□□ -1.42
PPP4R1-209ENST00000578329 DCAF5Q96JK2 942 aa6.15□□□□□ -1.42
PPP4R1-209ENST00000578329 BCL2L12Q9HB09 334 aa6.15□□□□□ -1.42
PPP4R1-209ENST00000578329 SRP68Q9UHB9 627 aaKnown RBP6.15□□□□□ -1.42
PPP4R1-209ENST00000578329 CNTNAP4Q9C0A0 1308 aa6.15□□□□□ -1.43
PPP4R1-209ENST00000578329 SIPA1L3O60292 1781 aaPredicted RBP6.15□□□□□ -1.43
PPP4R1-209ENST00000578329 ATP10DQ9P241 1426 aa6.15□□□□□ -1.43
PPP4R1-209ENST00000578329 RPS6KA4O75676 772 aa6.14□□□□□ -1.43
PPP4R1-209ENST00000578329 MMP10P09238 476 aa6.14□□□□□ -1.43
PPP4R1-209ENST00000578329 MTHFSDQ2M296 383 aaKnown RBP6.14□□□□□ -1.43
PPP4R1-209ENST00000578329 RC3H1Q5TC82 1133 aaKnown RBP6.14□□□□□ -1.43
PPP4R1-209ENST00000578329 MORC1Q86VD1 984 aa6.14□□□□□ -1.43
PPP4R1-209ENST00000578329 AK7Q96M32 723 aa6.14□□□□□ -1.43
PPP4R1-209ENST00000578329 NRXN2Q9P2S2 1712 aa6.13□□□□□ -1.43
PPP4R1-209ENST00000578329 PTCD1O75127 700 aaKnown RBP6.13□□□□□ -1.43
PPP4R1-209ENST00000578329 HMOX1P09601 288 aa6.13□□□□□ -1.43
PPP4R1-209ENST00000578329 CRKLP46109 303 aaKnown RBP6.13□□□□□ -1.43
PPP4R1-209ENST00000578329 SLC39A6Q13433 755 aa6.13□□□□□ -1.43
PPP4R1-209ENST00000578329 FKBP8Q14318 412 aa6.13□□□□□ -1.43
PPP4R1-209ENST00000578329 DNAJC10Q8IXB1 793 aa6.13□□□□□ -1.43
PPP4R1-209ENST00000578329 FLAD1Q8NFF5 587 aa6.13□□□□□ -1.43
PPP4R1-209ENST00000578329 IL17REQ8NFR9 667 aa6.13□□□□□ -1.43
PPP4R1-209ENST00000578329 PHACTR3Q96KR7 559 aa6.13□□□□□ -1.43
PPP4R1-209ENST00000578329 AFDNP55196 1824 aaKnown RBP6.13□□□□□ -1.43
PPP4R1-209ENST00000578329 A0A0G2JLW4 131 aa6.12□□□□□ -1.43
PPP4R1-209ENST00000578329 KIF3CO14782 793 aa6.12□□□□□ -1.43
PPP4R1-209ENST00000578329 RNMTO43148 476 aaKnown RBP6.12□□□□□ -1.43
PPP4R1-209ENST00000578329 KCNQ3O43525 872 aa6.12□□□□□ -1.43
PPP4R1-209ENST00000578329 CYP19A1P11511 503 aaPredicted RBP6.12□□□□□ -1.43
PPP4R1-209ENST00000578329 DPEP1P16444 411 aa6.12□□□□□ -1.43
PPP4R1-209ENST00000578329 TM4SF1P30408 202 aa6.12□□□□□ -1.43
PPP4R1-209ENST00000578329 SOS1Q07889 1333 aaPredicted RBP6.12□□□□□ -1.43
PPP4R1-209ENST00000578329 PLEKHO1Q53GL0 409 aaPredicted RBP6.12□□□□□ -1.43
PPP4R1-209ENST00000578329 PELP1Q8IZL8 1130 aaKnown RBP6.12□□□□□ -1.43
PPP4R1-209ENST00000578329 CARMIL3Q8ND23 1372 aa6.12□□□□□ -1.43
PPP4R1-209ENST00000578329 CCER1Q8TC90 406 aaPredicted RBP6.12□□□□□ -1.43
PPP4R1-209ENST00000578329 RBM42Q9BTD8 480 aaKnown RBP6.12□□□□□ -1.43
PPP4R1-209ENST00000578329 USP42Q9H9J4 1324 aaKnown RBP6.12□□□□□ -1.43
PPP4R1-209ENST00000578329 NPC1L1Q9UHC9 1359 aa6.12□□□□□ -1.43
PPP4R1-209ENST00000578329 ANKRD31Q8N7Z5 1873 aa6.11□□□□□ -1.43
PPP4R1-209ENST00000578329 POLRMTO00411 1230 aaKnown RBP6.11□□□□□ -1.43
PPP4R1-209ENST00000578329 CABP4P57796 275 aa6.11□□□□□ -1.43
PPP4R1-209ENST00000578329 AMOTQ4VCS5 1084 aa6.11□□□□□ -1.43
PPP4R1-209ENST00000578329 CC2D1BQ5T0F9 858 aaKnown RBP6.11□□□□□ -1.43
PPP4R1-209ENST00000578329 SLC52A2Q9HAB3 445 aa6.11□□□□□ -1.43
PPP4R1-209ENST00000578329 ZBTB1Q9Y2K1 713 aa6.11□□□□□ -1.43
PPP4R1-209ENST00000578329 SBF1O95248 1867 aa6.11□□□□□ -1.43
PPP4R1-209ENST00000578329 ARFGEF1Q9Y6D6 1849 aa6.11□□□□□ -1.43
PPP4R1-209ENST00000578329 CEMIPQ8WUJ3 1361 aa6.1□□□□□ -1.43
PPP4R1-209ENST00000578329 PRAMEF22A3QJZ6 481 aa6.1□□□□□ -1.43
PPP4R1-209ENST00000578329 GRIN3BO60391 1043 aa6.1□□□□□ -1.43
PPP4R1-209ENST00000578329 AKAP4Q5JQC9 854 aa6.1□□□□□ -1.43
PPP4R1-209ENST00000578329 TRAPPC3LQ5T215 181 aa6.1□□□□□ -1.43
PPP4R1-209ENST00000578329 RTCBQ9Y3I0 505 aaKnown RBP6.1□□□□□ -1.43
PPP4R1-209ENST00000578329 KNSTRNQ9Y448 316 aa6.1□□□□□ -1.43
PPP4R1-209ENST00000578329 DLEC1Q9Y238 1755 aa6.09□□□□□ -1.43
PPP4R1-209ENST00000578329 COL11A2P13942 1736 aaPredicted RBP6.09□□□□□ -1.43
PPP4R1-209ENST00000578329 HSP90AB1P08238 724 aaKnown RBP6.09□□□□□ -1.43
PPP4R1-209ENST00000578329 ADRA2BP18089 450 aa6.09□□□□□ -1.43
PPP4R1-209ENST00000578329 CHRNA5P30532 468 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms