RNA–Protein interactions for RNA: ENST00000578328.6

IKBKE-201, Transcript of inhibitor of nuclear factor kappa B kinase subunit epsilon, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene IKBKE, Length 2,493 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKE-201ENST00000578328 CCDC30Q5VVM6 783 aa17.29■□□□□ 0.36
IKBKE-201ENST00000578328 BRINP3Q76B58 766 aa17.29■□□□□ 0.36
IKBKE-201ENST00000578328 BABAM1Q9NWV8 329 aa17.29■□□□□ 0.36
IKBKE-201ENST00000578328 TEFQ10587 303 aa17.28■□□□□ 0.36
IKBKE-201ENST00000578328 C1orf141Q5JVX7 400 aa17.28■□□□□ 0.36
IKBKE-201ENST00000578328 NLRP2Q9NX02 1062 aa17.28■□□□□ 0.36
IKBKE-201ENST00000578328 VIRMAQ69YN4 1812 aaKnown RBP17.28■□□□□ 0.36
IKBKE-201ENST00000578328 KCNQ3O43525 872 aa17.28■□□□□ 0.36
IKBKE-201ENST00000578328 ANKRD45Q5TZF3 282 aa17.28■□□□□ 0.36
IKBKE-201ENST00000578328 PXDNQ92626 1479 aa17.28■□□□□ 0.36
IKBKE-201ENST00000578328 CHD1LQ86WJ1 897 aa17.27■□□□□ 0.36
IKBKE-201ENST00000578328 MEIS3Q99687 375 aa17.27■□□□□ 0.36
IKBKE-201ENST00000578328 SLKQ9H2G2 1235 aaPredicted RBP17.27■□□□□ 0.36
IKBKE-201ENST00000578328 TNS3Q68CZ2 1445 aa17.27■□□□□ 0.36
IKBKE-201ENST00000578328 SPATA31A3Q5VYP0 1347 aa17.27■□□□□ 0.36
IKBKE-201ENST00000578328 NCAPD2Q15021 1401 aa17.27■□□□□ 0.35
IKBKE-201ENST00000578328 FLIIQ13045 1269 aa17.26■□□□□ 0.35
IKBKE-201ENST00000578328 FKBP5Q13451 457 aaPredicted RBP17.26■□□□□ 0.35
IKBKE-201ENST00000578328 GCC1Q96CN9 775 aa17.26■□□□□ 0.35
IKBKE-201ENST00000578328 BTBD11A6QL63 1104 aa17.26■□□□□ 0.35
IKBKE-201ENST00000578328 HDGFL1Q5TGJ6 251 aa17.26■□□□□ 0.35
IKBKE-201ENST00000578328 RNMTO43148 476 aaKnown RBP17.25■□□□□ 0.35
IKBKE-201ENST00000578328 CSB-PGBD3P0DP91 1061 aa17.25■□□□□ 0.35
IKBKE-201ENST00000578328 EIF2S2P20042 333 aaKnown RBP17.25■□□□□ 0.35
IKBKE-201ENST00000578328 EIF4A1P60842 406 aaKnown RBP17.25■□□□□ 0.35
IKBKE-201ENST00000578328 SLAIN2Q9P270 581 aa17.25■□□□□ 0.35
IKBKE-201ENST00000578328 LMO7Q8WWI1 1683 aa17.25■□□□□ 0.35
IKBKE-201ENST00000578328 RAPGEF4Q8WZA2 1011 aa17.24■□□□□ 0.35
IKBKE-201ENST00000578328 FAM208AQ9UK61 1670 aaKnown RBP17.23■□□□□ 0.35
IKBKE-201ENST00000578328 PHAXQ9H814 394 aaKnown RBP17.23■□□□□ 0.35
IKBKE-201ENST00000578328 CAMTA1Q9Y6Y1 1673 aa17.22■□□□□ 0.35
IKBKE-201ENST00000578328 CCT4P50991 539 aaKnown RBP17.22■□□□□ 0.35
IKBKE-201ENST00000578328 CEP85Q6P2H3 762 aa17.22■□□□□ 0.35
IKBKE-201ENST00000578328 ANKRD44Q8N8A2 993 aa17.22■□□□□ 0.35
IKBKE-201ENST00000578328 SOS1Q07889 1333 aaPredicted RBP17.22■□□□□ 0.35
IKBKE-201ENST00000578328 ATP10DQ9P241 1426 aa17.21■□□□□ 0.35
IKBKE-201ENST00000578328 COL18A1P39060 1754 aa17.21■□□□□ 0.35
IKBKE-201ENST00000578328 CACNA1FO60840 1977 aa17.21■□□□□ 0.35
IKBKE-201ENST00000578328 RPAP2Q8IXW5 612 aaPredicted RBP17.2■□□□□ 0.34
IKBKE-201ENST00000578328 KDM3BQ7LBC6 1761 aa17.2■□□□□ 0.34
IKBKE-201ENST00000578328 DCTPP1Q9H773 170 aa17.2■□□□□ 0.34
IKBKE-201ENST00000578328 CHPF2Q9P2E5 772 aa17.2■□□□□ 0.34
IKBKE-201ENST00000578328 TATP17735 454 aaPredicted RBP17.19■□□□□ 0.34
IKBKE-201ENST00000578328 ANXA1P04083 346 aa17.19■□□□□ 0.34
IKBKE-201ENST00000578328 SPRYD3Q8NCJ5 442 aa17.19■□□□□ 0.34
IKBKE-201ENST00000578328 ARXQ96QS3 562 aa17.19■□□□□ 0.34
IKBKE-201ENST00000578328 APBB1O00213 710 aa17.18■□□□□ 0.34
IKBKE-201ENST00000578328 CRYBG1Q9Y4K1 1723 aa17.18■□□□□ 0.34
IKBKE-201ENST00000578328 MEGF6O75095 1541 aa17.17■□□□□ 0.34
IKBKE-201ENST00000578328 SOS2Q07890 1332 aaPredicted RBP17.17■□□□□ 0.34
IKBKE-201ENST00000578328 PRAMEF22A3QJZ6 481 aa17.16■□□□□ 0.34
IKBKE-201ENST00000578328 EIF5BO60841 1220 aaKnown RBP17.16■□□□□ 0.34
IKBKE-201ENST00000578328 UPF2Q9HAU5 1272 aaKnown RBP17.16■□□□□ 0.34
IKBKE-201ENST00000578328 HOXB7P09629 217 aa17.16■□□□□ 0.34
IKBKE-201ENST00000578328 PRDM11Q9NQV5 511 aa17.16■□□□□ 0.34
IKBKE-201ENST00000578328 SPG7Q9UQ90 795 aa17.16■□□□□ 0.34
IKBKE-201ENST00000578328 CPDO75976 1380 aa17.15■□□□□ 0.34
IKBKE-201ENST00000578328 GIGYF1O75420 1035 aaPredicted RBP17.15■□□□□ 0.34
IKBKE-201ENST00000578328 GNAI2P04899 355 aa17.15■□□□□ 0.34
IKBKE-201ENST00000578328 PHKG2P15735 406 aa17.15■□□□□ 0.34
IKBKE-201ENST00000578328 SLC39A6Q13433 755 aa17.15■□□□□ 0.34
IKBKE-201ENST00000578328 C16orf71Q8IYS4 520 aaPredicted RBP17.15■□□□□ 0.34
IKBKE-201ENST00000578328 MFAP1P55081 439 aaKnown RBP17.14■□□□□ 0.34
IKBKE-201ENST00000578328 NFATC2IPQ8NCF5 419 aa17.14■□□□□ 0.34
IKBKE-201ENST00000578328 SMARCA5O60264 1052 aaPredicted RBP17.14■□□□□ 0.33
IKBKE-201ENST00000578328 OVOS2A0A0G2JMS6 1433 aa17.14■□□□□ 0.33
IKBKE-201ENST00000578328 ANTXR1Q9H6X2 564 aa17.13■□□□□ 0.33
IKBKE-201ENST00000578328 PI4KAP2A4QPH2 592 aa17.13■□□□□ 0.33
IKBKE-201ENST00000578328 CYP27B1O15528 508 aa17.13■□□□□ 0.33
IKBKE-201ENST00000578328 GNAI3P08754 354 aa17.13■□□□□ 0.33
IKBKE-201ENST00000578328 BMP2KLQ5H9B9 411 aa17.13■□□□□ 0.33
IKBKE-201ENST00000578328 IFNL2Q8IZJ0 200 aa17.13■□□□□ 0.33
IKBKE-201ENST00000578328 PI4KAP1Q8N8J0 262 aa17.13■□□□□ 0.33
IKBKE-201ENST00000578328 TBC1D32Q96NH3 1257 aa17.13■□□□□ 0.33
IKBKE-201ENST00000578328 USP44Q9H0E7 712 aa17.13■□□□□ 0.33
IKBKE-201ENST00000578328 TBC1D2Q9BYX2 928 aa17.12■□□□□ 0.33
IKBKE-201ENST00000578328 SLC52A2Q9HAB3 445 aa17.12■□□□□ 0.33
IKBKE-201ENST00000578328 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.12■□□□□ 0.33
IKBKE-201ENST00000578328 KDM6AO15550 1401 aaPredicted RBP17.12■□□□□ 0.33
IKBKE-201ENST00000578328 SIPA1L3O60292 1781 aaPredicted RBP17.12■□□□□ 0.33
IKBKE-201ENST00000578328 HMMRO75330 724 aa17.12■□□□□ 0.33
IKBKE-201ENST00000578328 PROSER3Q2NL68 480 aa17.12■□□□□ 0.33
IKBKE-201ENST00000578328 DBF4Q9UBU7 674 aaPredicted RBP17.12■□□□□ 0.33
IKBKE-201ENST00000578328 ZNF790Q6PG37 636 aa17.11■□□□□ 0.33
IKBKE-201ENST00000578328 TOM1L2Q6ZVM7 507 aa17.11■□□□□ 0.33
IKBKE-201ENST00000578328 PLEKHM2Q8IWE5 1019 aa17.11■□□□□ 0.33
IKBKE-201ENST00000578328 OTUD7AQ8TE49 926 aaPredicted RBP17.11■□□□□ 0.33
IKBKE-201ENST00000578328 CHMP4AQ9BY43 222 aa17.11■□□□□ 0.33
IKBKE-201ENST00000578328 LRRFIP2Q9Y608 721 aaKnown RBP17.11■□□□□ 0.33
IKBKE-201ENST00000578328 HEG1Q9ULI3 1381 aa17.11■□□□□ 0.33
IKBKE-201ENST00000578328 PNMA6EA0A0J9YXQ4 647 aa17.1■□□□□ 0.33
IKBKE-201ENST00000578328 SRCIN1Q9C0H9 1055 aa17.1■□□□□ 0.33
IKBKE-201ENST00000578328 SCN11AQ9UI33 1791 aa17.1■□□□□ 0.33
IKBKE-201ENST00000578328 DNAAF4Q8WXU2 420 aa17.1■□□□□ 0.33
IKBKE-201ENST00000578328 ADAMTS7Q9UKP4 1686 aa17.1■□□□□ 0.33
IKBKE-201ENST00000578328 UBTFL1P0CB47 393 aaPredicted RBP17.09■□□□□ 0.33
IKBKE-201ENST00000578328 BECN1Q14457 450 aa17.09■□□□□ 0.33
IKBKE-201ENST00000578328 EXOC6BQ9Y2D4 811 aa17.09■□□□□ 0.33
IKBKE-201ENST00000578328 WDR17Q8IZU2 1322 aa17.09■□□□□ 0.33
IKBKE-201ENST00000578328 ABCC6O95255 1503 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms