RNA–Protein interactions for RNA: ENST00000578321.1

SPECC1-212, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 4

Gene SPECC1, Length 433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-212ENST00000578321 ERVV-2B6SEH9 535 aa26.58■■□□□ 1.85
SPECC1-212ENST00000578321 PER1O15534 1290 aaPredicted RBP26.58■■□□□ 1.85
SPECC1-212ENST00000578321 SSFA2P28290 1259 aa26.58■■□□□ 1.85
SPECC1-212ENST00000578321 AMOTQ4VCS5 1084 aa26.58■■□□□ 1.85
SPECC1-212ENST00000578321 ZNF530Q6P9A1 599 aaPredicted RBP26.58■■□□□ 1.85
SPECC1-212ENST00000578321 DCAF5Q96JK2 942 aa26.58■■□□□ 1.85
SPECC1-212ENST00000578321 AEBP1Q8IUX7 1158 aa26.56■■□□□ 1.84
SPECC1-212ENST00000578321 CD2APQ9Y5K6 639 aa26.56■■□□□ 1.84
SPECC1-212ENST00000578321 GNPATO15228 680 aa26.55■■□□□ 1.84
SPECC1-212ENST00000578321 AMER1Q5JTC6 1135 aaPredicted RBP26.54■■□□□ 1.84
SPECC1-212ENST00000578321 SULT6B1Q6IMI4 303 aa26.54■■□□□ 1.84
SPECC1-212ENST00000578321 RBM42Q9BTD8 480 aaKnown RBP26.54■■□□□ 1.84
SPECC1-212ENST00000578321 GRIN3BO60391 1043 aa26.53■■□□□ 1.84
SPECC1-212ENST00000578321 YBX3P16989 372 aaKnown RBP eCLIP26.53■■□□□ 1.84
SPECC1-212ENST00000578321 CABP4P57796 275 aa26.53■■□□□ 1.84
SPECC1-212ENST00000578321 C1orf141Q5JVX7 400 aa26.53■■□□□ 1.84
SPECC1-212ENST00000578321 IL13P35225 146 aa26.52■■□□□ 1.84
SPECC1-212ENST00000578321 MTHFSP49914 203 aa26.52■■□□□ 1.84
SPECC1-212ENST00000578321 UBR3Q6ZT12 1888 aa26.52■■□□□ 1.84
SPECC1-212ENST00000578321 SLC4A9Q96Q91 983 aa26.5■■□□□ 1.83
SPECC1-212ENST00000578321 KDM6AO15550 1401 aaPredicted RBP26.48■■□□□ 1.83
SPECC1-212ENST00000578321 RTCBQ9Y3I0 505 aaKnown RBP26.48■■□□□ 1.83
SPECC1-212ENST00000578321 KDRP35968 1356 aa26.47■■□□□ 1.83
SPECC1-212ENST00000578321 TRAPPC3LQ5T215 181 aa26.47■■□□□ 1.83
SPECC1-212ENST00000578321 GOLGB1Q14789 3259 aaKnown RBP26.47■■□□□ 1.83
SPECC1-212ENST00000578321 ZNF316A6NFI3 1004 aaPredicted RBP26.46■■□□□ 1.83
SPECC1-212ENST00000578321 DDX10Q13206 875 aaKnown RBP26.45■■□□□ 1.82
SPECC1-212ENST00000578321 NFATC2IPQ8NCF5 419 aa26.45■■□□□ 1.82
SPECC1-212ENST00000578321 RC3H1Q5TC82 1133 aaKnown RBP26.44■■□□□ 1.82
SPECC1-212ENST00000578321 PTCD1O75127 700 aaKnown RBP26.43■■□□□ 1.82
SPECC1-212ENST00000578321 CC2D1BQ5T0F9 858 aaKnown RBP26.43■■□□□ 1.82
SPECC1-212ENST00000578321 MMP10P09238 476 aa26.42■■□□□ 1.82
SPECC1-212ENST00000578321 NPC1L1Q9UHC9 1359 aa26.42■■□□□ 1.82
SPECC1-212ENST00000578321 CNTNAP4Q9C0A0 1308 aa26.41■■□□□ 1.82
SPECC1-212ENST00000578321 ARHGEF1Q92888 912 aaKnown RBP26.41■■□□□ 1.82
SPECC1-212ENST00000578321 RPS6KA4O75676 772 aa26.4■■□□□ 1.82
SPECC1-212ENST00000578321 HMOX1P09601 288 aa26.4■■□□□ 1.82
SPECC1-212ENST00000578321 ADRA2BP18089 450 aa26.4■■□□□ 1.82
SPECC1-212ENST00000578321 AKAP4Q5JQC9 854 aa26.4■■□□□ 1.82
SPECC1-212ENST00000578321 WWC3Q9ULE0 1092 aa26.4■■□□□ 1.82
SPECC1-212ENST00000578321 CNGB1Q14028 1251 aaPredicted RBP26.39■■□□□ 1.82
SPECC1-212ENST00000578321 NLGN1Q8N2Q7 840 aa26.39■■□□□ 1.82
SPECC1-212ENST00000578321 ZNF831Q5JPB2 1677 aa26.38■■□□□ 1.81
SPECC1-212ENST00000578321 RFC4P35249 363 aa26.38■■□□□ 1.81
SPECC1-212ENST00000578321 C1QTNF8P60827 252 aa26.38■■□□□ 1.81
SPECC1-212ENST00000578321 DIAPH1O60610 1272 aaKnown RBP26.37■■□□□ 1.81
SPECC1-212ENST00000578321 LGR6Q9HBX8 967 aa26.36■■□□□ 1.81
SPECC1-212ENST00000578321 GIGYF1O75420 1035 aaPredicted RBP26.35■■□□□ 1.81
SPECC1-212ENST00000578321 CRKLP46109 303 aaKnown RBP26.35■■□□□ 1.81
SPECC1-212ENST00000578321 GYS1P13807 737 aa26.34■■□□□ 1.81
SPECC1-212ENST00000578321 SLC52A2Q9HAB3 445 aa26.34■■□□□ 1.81
SPECC1-212ENST00000578321 COL5A3P25940 1745 aaPredicted RBP26.32■■□□□ 1.8
SPECC1-212ENST00000578321 RNMTO43148 476 aaKnown RBP26.32■■□□□ 1.8
SPECC1-212ENST00000578321 MTHFSDQ2M296 383 aaKnown RBP26.31■■□□□ 1.8
SPECC1-212ENST00000578321 PARP3Q9Y6F1 533 aa26.3■■□□□ 1.8
SPECC1-212ENST00000578321 SCN11AQ9UI33 1791 aa26.3■■□□□ 1.8
SPECC1-212ENST00000578321 MYH14Q7Z406 1995 aaKnown RBP26.29■■□□□ 1.8
SPECC1-212ENST00000578321 SENP3-EIF4A1A0A087X0R7 540 aa26.29■■□□□ 1.8
SPECC1-212ENST00000578321 TGFB2P61812 414 aa26.29■■□□□ 1.8
SPECC1-212ENST00000578321 CCDC87Q9NVE4 849 aa26.29■■□□□ 1.8
SPECC1-212ENST00000578321 SLC39A6Q13433 755 aa26.28■■□□□ 1.8
SPECC1-212ENST00000578321 DNAJC10Q8IXB1 793 aa26.28■■□□□ 1.8
SPECC1-212ENST00000578321 ATP10DQ9P241 1426 aa26.28■■□□□ 1.8
SPECC1-212ENST00000578321 CICQ96RK0 1608 aaPredicted RBP26.28■■□□□ 1.8
SPECC1-212ENST00000578321 A0A0G2JLW4 131 aa26.27■■□□□ 1.8
SPECC1-212ENST00000578321 INTS5Q6P9B9 1019 aaKnown RBP26.27■■□□□ 1.8
SPECC1-212ENST00000578321 SRP68Q9UHB9 627 aaKnown RBP26.27■■□□□ 1.8
SPECC1-212ENST00000578321 U2SURPO15042 1029 aaKnown RBP26.26■■□□□ 1.79
SPECC1-212ENST00000578321 PXDNLA1KZ92 1463 aa26.25■■□□□ 1.79
SPECC1-212ENST00000578321 USP42Q9H9J4 1324 aaKnown RBP26.25■■□□□ 1.79
SPECC1-212ENST00000578321 C10orf71Q711Q0 1435 aa26.24■■□□□ 1.79
SPECC1-212ENST00000578321 FKBP8Q14318 412 aa26.23■■□□□ 1.79
SPECC1-212ENST00000578321 GPBP1L1Q9HC44 474 aaPredicted RBP26.23■■□□□ 1.79
SPECC1-212ENST00000578321 BCS1LQ9Y276 419 aa26.23■■□□□ 1.79
SPECC1-212ENST00000578321 TJP1Q07157 1748 aa26.22■■□□□ 1.79
SPECC1-212ENST00000578321 DPEP1P16444 411 aa26.22■■□□□ 1.79
SPECC1-212ENST00000578321 ZNF526Q8TF50 670 aaPredicted RBP26.22■■□□□ 1.79
SPECC1-212ENST00000578321 MRC1P22897 1456 aa26.22■■□□□ 1.79
SPECC1-212ENST00000578321 ZPR1O75312 459 aa26.21■■□□□ 1.79
SPECC1-212ENST00000578321 CYP19A1P11511 503 aaPredicted RBP26.21■■□□□ 1.79
SPECC1-212ENST00000578321 C4AP0C0L4 1744 aa26.21■■□□□ 1.79
SPECC1-212ENST00000578321 KIF13BQ9NQT8 1826 aa26.21■■□□□ 1.79
SPECC1-212ENST00000578321 ADCY9O60503 1353 aa26.2■■□□□ 1.79
SPECC1-212ENST00000578321 COL3A1P02461 1466 aaPredicted RBP26.2■■□□□ 1.78
SPECC1-212ENST00000578321 GAS2L2Q8NHY3 880 aa26.19■■□□□ 1.78
SPECC1-212ENST00000578321 SOS1Q07889 1333 aaPredicted RBP26.18■■□□□ 1.78
SPECC1-212ENST00000578321 N4BP2Q86UW6 1770 aaPredicted RBP26.18■■□□□ 1.78
SPECC1-212ENST00000578321 PPP2R1AP30153 589 aa26.18■■□□□ 1.78
SPECC1-212ENST00000578321 DDR1Q08345 913 aa26.18■■□□□ 1.78
SPECC1-212ENST00000578321 USPL1Q5W0Q7 1092 aa26.18■■□□□ 1.78
SPECC1-212ENST00000578321 VSIG10Q8N0Z9 540 aa26.18■■□□□ 1.78
SPECC1-212ENST00000578321 GNAT3A8MTJ3 354 aa26.17■■□□□ 1.78
SPECC1-212ENST00000578321 FCHSD2O94868 740 aa26.17■■□□□ 1.78
SPECC1-212ENST00000578321 TTC5Q8N0Z6 440 aa26.17■■□□□ 1.78
SPECC1-212ENST00000578321 CFAP53Q96M91 514 aa26.17■■□□□ 1.78
SPECC1-212ENST00000578321 KCPQ6ZWJ8 1503 aa26.16■■□□□ 1.78
SPECC1-212ENST00000578321 ARHGAP27Q6ZUM4 889 aa26.16■■□□□ 1.78
SPECC1-212ENST00000578321 ZBTB1Q9Y2K1 713 aa26.16■■□□□ 1.78
SPECC1-212ENST00000578321 KIAA1551Q9HCM1 1747 aa26.16■■□□□ 1.78
SPECC1-212ENST00000578321 KCNA3P22001 575 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms