RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 PIGBQ92521 554 aa17.25■□□□□ 0.35
CCDC57-211ENST00000578187 KDRP35968 1356 aa17.25■□□□□ 0.35
CCDC57-211ENST00000578187 DDX10Q13206 875 aaKnown RBP17.23■□□□□ 0.35
CCDC57-211ENST00000578187 AMOTQ4VCS5 1084 aa17.23■□□□□ 0.35
CCDC57-211ENST00000578187 PLEKHO1Q53GL0 409 aaPredicted RBP17.23■□□□□ 0.35
CCDC57-211ENST00000578187 PELP1Q8IZL8 1130 aaKnown RBP17.23■□□□□ 0.35
CCDC57-211ENST00000578187 LOC102724428A0A0B4J2F2 783 aa17.22■□□□□ 0.35
CCDC57-211ENST00000578187 SIK1P57059 783 aa17.22■□□□□ 0.35
CCDC57-211ENST00000578187 PPP2R1AP30153 589 aa17.21■□□□□ 0.35
CCDC57-211ENST00000578187 MSL1Q68DK7 614 aa17.21■□□□□ 0.35
CCDC57-211ENST00000578187 DCAF5Q96JK2 942 aa17.21■□□□□ 0.35
CCDC57-211ENST00000578187 CHD4Q14839 1912 aa17.2■□□□□ 0.34
CCDC57-211ENST00000578187 ERVV-2B6SEH9 535 aa17.2■□□□□ 0.34
CCDC57-211ENST00000578187 DIAPH1O60610 1272 aaKnown RBP17.2■□□□□ 0.34
CCDC57-211ENST00000578187 ATP6V1AP38606 617 aa17.2■□□□□ 0.34
CCDC57-211ENST00000578187 C1orf141Q5JVX7 400 aa17.2■□□□□ 0.34
CCDC57-211ENST00000578187 PHF14O94880 888 aa17.19■□□□□ 0.34
CCDC57-211ENST00000578187 SSFA2P28290 1259 aa17.19■□□□□ 0.34
CCDC57-211ENST00000578187 ZNF530Q6P9A1 599 aaPredicted RBP17.19■□□□□ 0.34
CCDC57-211ENST00000578187 AEBP1Q8IUX7 1158 aa17.19■□□□□ 0.34
CCDC57-211ENST00000578187 ASAP1Q9ULH1 1129 aa17.19■□□□□ 0.34
CCDC57-211ENST00000578187 VIRMAQ69YN4 1812 aaKnown RBP17.19■□□□□ 0.34
CCDC57-211ENST00000578187 UTRNP46939 3433 aa17.18■□□□□ 0.34
CCDC57-211ENST00000578187 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.17■□□□□ 0.34
CCDC57-211ENST00000578187 SULT6B1Q6IMI4 303 aa17.17■□□□□ 0.34
CCDC57-211ENST00000578187 UBR3Q6ZT12 1888 aa17.17■□□□□ 0.34
CCDC57-211ENST00000578187 GNPATO15228 680 aa17.16■□□□□ 0.34
CCDC57-211ENST00000578187 GRIN3BO60391 1043 aa17.16■□□□□ 0.34
CCDC57-211ENST00000578187 CABP4P57796 275 aa17.16■□□□□ 0.34
CCDC57-211ENST00000578187 LINC00116Q8NCU8 138 aa17.16■□□□□ 0.34
CCDC57-211ENST00000578187 NLGN2Q8NFZ4 835 aa17.16■□□□□ 0.34
CCDC57-211ENST00000578187 CFAP53Q96M91 514 aa17.16■□□□□ 0.34
CCDC57-211ENST00000578187 ATG3Q9NT62 314 aa17.16■□□□□ 0.34
CCDC57-211ENST00000578187 CD2APQ9Y5K6 639 aa17.16■□□□□ 0.34
CCDC57-211ENST00000578187 SCN11AQ9UI33 1791 aa17.15■□□□□ 0.34
CCDC57-211ENST00000578187 ZNF316A6NFI3 1004 aaPredicted RBP17.15■□□□□ 0.34
CCDC57-211ENST00000578187 ZNF784Q8NCA9 323 aaPredicted RBP17.15■□□□□ 0.34
CCDC57-211ENST00000578187 RBM42Q9BTD8 480 aaKnown RBP17.15■□□□□ 0.34
CCDC57-211ENST00000578187 ZNF831Q5JPB2 1677 aa17.14■□□□□ 0.33
CCDC57-211ENST00000578187 RALBP1Q15311 655 aa17.14■□□□□ 0.33
CCDC57-211ENST00000578187 ADAMTS7Q9UKP4 1686 aa17.13■□□□□ 0.33
CCDC57-211ENST00000578187 ITPK1Q13572 414 aa17.13■□□□□ 0.33
CCDC57-211ENST00000578187 RTCBQ9Y3I0 505 aaKnown RBP17.13■□□□□ 0.33
CCDC57-211ENST00000578187 HMOX1P09601 288 aa17.11■□□□□ 0.33
CCDC57-211ENST00000578187 TRAPPC3LQ5T215 181 aa17.11■□□□□ 0.33
CCDC57-211ENST00000578187 KDM6AO15550 1401 aaPredicted RBP17.11■□□□□ 0.33
CCDC57-211ENST00000578187 U2SURPO15042 1029 aaKnown RBP17.09■□□□□ 0.33
CCDC57-211ENST00000578187 AKAP4Q5JQC9 854 aa17.09■□□□□ 0.33
CCDC57-211ENST00000578187 RC3H1Q5TC82 1133 aaKnown RBP17.09■□□□□ 0.33
CCDC57-211ENST00000578187 AMIGO3Q86WK7 504 aa17.09■□□□□ 0.33
CCDC57-211ENST00000578187 MYBBP1AQ9BQG0 1328 aaKnown RBP17.09■□□□□ 0.33
CCDC57-211ENST00000578187 COL5A3P25940 1745 aaPredicted RBP17.08■□□□□ 0.32
CCDC57-211ENST00000578187 CNTNAP4Q9C0A0 1308 aa17.08■□□□□ 0.32
CCDC57-211ENST00000578187 NFATC2IPQ8NCF5 419 aa17.08■□□□□ 0.32
CCDC57-211ENST00000578187 NUDCQ9Y266 331 aa17.08■□□□□ 0.32
CCDC57-211ENST00000578187 GOLGB1Q14789 3259 aaKnown RBP17.08■□□□□ 0.32
CCDC57-211ENST00000578187 MRC1P22897 1456 aa17.07■□□□□ 0.32
CCDC57-211ENST00000578187 PTCD1O75127 700 aaKnown RBP17.07■□□□□ 0.32
CCDC57-211ENST00000578187 YBX3P16989 372 aaKnown RBP eCLIP17.07■□□□□ 0.32
CCDC57-211ENST00000578187 RFC4P35249 363 aa17.07■□□□□ 0.32
CCDC57-211ENST00000578187 SMIM5Q71RC9 77 aa17.07■□□□□ 0.32
CCDC57-211ENST00000578187 NLGN1Q8N2Q7 840 aa17.07■□□□□ 0.32
CCDC57-211ENST00000578187 PRKRIP1Q9H875 184 aaPredicted RBP17.07■□□□□ 0.32
CCDC57-211ENST00000578187 RSPH6AQ9H0K4 717 aa17.06■□□□□ 0.32
CCDC57-211ENST00000578187 MMP10P09238 476 aa17.05■□□□□ 0.32
CCDC57-211ENST00000578187 SIPA1L3O60292 1781 aaPredicted RBP17.05■□□□□ 0.32
CCDC57-211ENST00000578187 RPS6KA4O75676 772 aa17.04■□□□□ 0.32
CCDC57-211ENST00000578187 SLC4A9Q96Q91 983 aa17.04■□□□□ 0.32
CCDC57-211ENST00000578187 DLG5Q8TDM6 1919 aa17.04■□□□□ 0.32
CCDC57-211ENST00000578187 GIGYF1O75420 1035 aaPredicted RBP17.03■□□□□ 0.32
CCDC57-211ENST00000578187 U2AF1L5P0DN76 240 aaPredicted RBP17.03■□□□□ 0.32
CCDC57-211ENST00000578187 PRKAR2BP31323 418 aa17.03■□□□□ 0.32
CCDC57-211ENST00000578187 U2AF1Q01081 240 aaKnown RBP eCLIP17.03■□□□□ 0.32
CCDC57-211ENST00000578187 MTHFSDQ2M296 383 aaKnown RBP17.03■□□□□ 0.32
CCDC57-211ENST00000578187 ARHGEF1Q92888 912 aaKnown RBP17.03■□□□□ 0.32
CCDC57-211ENST00000578187 SLC52A2Q9HAB3 445 aa17.03■□□□□ 0.32
CCDC57-211ENST00000578187 CICQ96RK0 1608 aaPredicted RBP17.03■□□□□ 0.32
CCDC57-211ENST00000578187 CRKLP46109 303 aaKnown RBP17.02■□□□□ 0.32
CCDC57-211ENST00000578187 CCDC87Q9NVE4 849 aa17.02■□□□□ 0.32
CCDC57-211ENST00000578187 PARP3Q9Y6F1 533 aa17.02■□□□□ 0.32
CCDC57-211ENST00000578187 FCHSD2O94868 740 aa17.01■□□□□ 0.31
CCDC57-211ENST00000578187 RNMTO43148 476 aaKnown RBP17■□□□□ 0.31
CCDC57-211ENST00000578187 C4AP0C0L4 1744 aa17■□□□□ 0.31
CCDC57-211ENST00000578187 TGFB2P61812 414 aa17■□□□□ 0.31
CCDC57-211ENST00000578187 TJP1Q07157 1748 aa17■□□□□ 0.31
CCDC57-211ENST00000578187 GAS2L2Q8NHY3 880 aa17■□□□□ 0.31
CCDC57-211ENST00000578187 UBR2Q8IWV8 1755 aa17■□□□□ 0.31
CCDC57-211ENST00000578187 GYS1P13807 737 aa16.99■□□□□ 0.31
CCDC57-211ENST00000578187 C1QTNF8P60827 252 aa16.99■□□□□ 0.31
CCDC57-211ENST00000578187 PHACTR3Q96KR7 559 aa16.99■□□□□ 0.31
CCDC57-211ENST00000578187 KIF13BQ9NQT8 1826 aa16.98■□□□□ 0.31
CCDC57-211ENST00000578187 LGR6Q9HBX8 967 aa16.98■□□□□ 0.31
CCDC57-211ENST00000578187 ZPR1O75312 459 aa16.97■□□□□ 0.31
CCDC57-211ENST00000578187 TTC5Q8N0Z6 440 aa16.97■□□□□ 0.31
CCDC57-211ENST00000578187 WWC3Q9ULE0 1092 aa16.97■□□□□ 0.31
CCDC57-211ENST00000578187 C10orf71Q711Q0 1435 aa16.96■□□□□ 0.31
CCDC57-211ENST00000578187 PLEKHF1Q96S99 279 aa16.96■□□□□ 0.31
CCDC57-211ENST00000578187 MYH14Q7Z406 1995 aaKnown RBP16.96■□□□□ 0.31
CCDC57-211ENST00000578187 ATP10DQ9P241 1426 aa16.96■□□□□ 0.3
CCDC57-211ENST00000578187 USP42Q9H9J4 1324 aaKnown RBP16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms