RNA–Protein interactions for RNA: ENST00000578029.1

KRT39-202, Transcript of keratin 39, humanhuman

TSL 3

Gene KRT39, Length 777 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-202ENST00000578029 NDUFB5O43674 189 aa7.42□□□□□ -1.22
KRT39-202ENST00000578029 PTPN5P54829 565 aa7.42□□□□□ -1.22
KRT39-202ENST00000578029 GDF10P55107 478 aa7.42□□□□□ -1.22
KRT39-202ENST00000578029 NKX2-3Q8TAU0 364 aa7.42□□□□□ -1.22
KRT39-202ENST00000578029 C8orf37Q96NL8 207 aa7.42□□□□□ -1.22
KRT39-202ENST00000578029 CITED4Q96RK1 184 aa7.42□□□□□ -1.22
KRT39-202ENST00000578029 WNT7BP56706 349 aa7.41□□□□□ -1.22
KRT39-202ENST00000578029 FGD1P98174 961 aa7.41□□□□□ -1.22
KRT39-202ENST00000578029 DHX9Q08211 1270 aaKnown RBP7.41□□□□□ -1.22
KRT39-202ENST00000578029 TNS4Q8IZW8 715 aa7.41□□□□□ -1.22
KRT39-202ENST00000578029 OSBPL3Q9H4L5 887 aa7.41□□□□□ -1.22
KRT39-202ENST00000578029 HCSTQ9UBK5 93 aa7.41□□□□□ -1.22
KRT39-202ENST00000578029 BRPF3Q9ULD4 1205 aa7.41□□□□□ -1.22
KRT39-202ENST00000578029 RECKO95980 971 aa7.4□□□□□ -1.22
KRT39-202ENST00000578029 INHAP05111 366 aa7.4□□□□□ -1.22
KRT39-202ENST00000578029 SCNN1DP51172 638 aa7.4□□□□□ -1.22
KRT39-202ENST00000578029 TRIM32Q13049 653 aa7.4□□□□□ -1.22
KRT39-202ENST00000578029 ALKBH2Q6NS38 261 aa7.4□□□□□ -1.22
KRT39-202ENST00000578029 C16orf46Q6P387 395 aa7.4□□□□□ -1.22
KRT39-202ENST00000578029 TMC7Q7Z402 723 aa7.4□□□□□ -1.22
KRT39-202ENST00000578029 CHMP7Q8WUX9 453 aaPredicted RBP7.4□□□□□ -1.22
KRT39-202ENST00000578029 SERTAD1Q9UHV2 236 aa7.4□□□□□ -1.22
KRT39-202ENST00000578029 MPSTP25325 297 aa7.39□□□□□ -1.23
KRT39-202ENST00000578029 ITGAEP38570 1179 aa7.39□□□□□ -1.23
KRT39-202ENST00000578029 ARID5BQ14865 1188 aa7.39□□□□□ -1.23
KRT39-202ENST00000578029 ESCO1Q5FWF5 840 aa7.39□□□□□ -1.23
KRT39-202ENST00000578029 SLC4A9Q96Q91 983 aa7.39□□□□□ -1.23
KRT39-202ENST00000578029 TSPAN10Q9H1Z9 355 aaPredicted RBP7.39□□□□□ -1.23
KRT39-202ENST00000578029 CYLDQ9NQC7 956 aa7.39□□□□□ -1.23
KRT39-202ENST00000578029 PPP1R12BO60237 982 aaPredicted RBP7.38□□□□□ -1.23
KRT39-202ENST00000578029 P4HBP07237 508 aaKnown RBP7.38□□□□□ -1.23
KRT39-202ENST00000578029 EPHA4P54764 986 aa7.38□□□□□ -1.23
KRT39-202ENST00000578029 ZC3H6P61129 1189 aaKnown RBP7.38□□□□□ -1.23
KRT39-202ENST00000578029 AAMPQ13685 434 aa7.38□□□□□ -1.23
KRT39-202ENST00000578029 TSNAXIP1Q2TAA8 658 aa7.38□□□□□ -1.23
KRT39-202ENST00000578029 CYP2U1Q7Z449 544 aa7.38□□□□□ -1.23
KRT39-202ENST00000578029 STAG2Q8N3U4 1231 aa7.38□□□□□ -1.23
KRT39-202ENST00000578029 TMC1Q8TDI8 760 aa7.38□□□□□ -1.23
KRT39-202ENST00000578029 PPEF1O14829 653 aaPredicted RBP7.37□□□□□ -1.23
KRT39-202ENST00000578029 TREHO43280 583 aa7.37□□□□□ -1.23
KRT39-202ENST00000578029 GNRH1P01148 92 aa7.37□□□□□ -1.23
KRT39-202ENST00000578029 SKOR1P84550 965 aa7.37□□□□□ -1.23
KRT39-202ENST00000578029 EHBP1Q8NDI1 1231 aa7.37□□□□□ -1.23
KRT39-202ENST00000578029 DMRTB1Q96MA1 342 aa7.37□□□□□ -1.23
KRT39-202ENST00000578029 DRC1Q96MC2 740 aa7.37□□□□□ -1.23
KRT39-202ENST00000578029 CDK15Q96Q40 435 aa7.37□□□□□ -1.23
KRT39-202ENST00000578029 ETNK1Q9HBU6 452 aa7.37□□□□□ -1.23
KRT39-202ENST00000578029 TMPRSS4Q9NRS4 437 aa7.37□□□□□ -1.23
KRT39-202ENST00000578029 CHMP3Q9Y3E7 222 aa7.37□□□□□ -1.23
KRT39-202ENST00000578029 TTBK1Q5TCY1 1321 aaPredicted RBP7.36□□□□□ -1.23
KRT39-202ENST00000578029 A0A1W2PRU2 124 aa7.36□□□□□ -1.23
KRT39-202ENST00000578029 FSHRP23945 695 aa7.36□□□□□ -1.23
KRT39-202ENST00000578029 PLCB3Q01970 1234 aa7.36□□□□□ -1.23
KRT39-202ENST00000578029 FMR1Q06787 632 aaKnown RBP eCLIP7.36□□□□□ -1.23
KRT39-202ENST00000578029 SREK1Q8WXA9 508 aaKnown RBP7.36□□□□□ -1.23
KRT39-202ENST00000578029 SAP130Q9H0E3 1048 aa7.36□□□□□ -1.23
KRT39-202ENST00000578029 STIM2Q9P246 746 aa7.36□□□□□ -1.23
KRT39-202ENST00000578029 A6NJY4 79 aa7.35□□□□□ -1.23
KRT39-202ENST00000578029 STAU1O95793 577 aaKnown RBP7.35□□□□□ -1.23
KRT39-202ENST00000578029 GGCXP38435 758 aa7.35□□□□□ -1.23
KRT39-202ENST00000578029 EIF1AXP47813 144 aaKnown RBP7.35□□□□□ -1.23
KRT39-202ENST00000578029 FOXK2Q01167 660 aa7.35□□□□□ -1.23
KRT39-202ENST00000578029 XPCQ01831 940 aaPredicted RBP7.35□□□□□ -1.23
KRT39-202ENST00000578029 PDE3BQ13370 1112 aa7.35□□□□□ -1.23
KRT39-202ENST00000578029 MRPL58Q14197 206 aaKnown RBP7.35□□□□□ -1.23
KRT39-202ENST00000578029 MPNDQ8N594 471 aa7.35□□□□□ -1.23
KRT39-202ENST00000578029 ABTB2Q8N961 1025 aa7.35□□□□□ -1.23
KRT39-202ENST00000578029 ANKLE1Q8NAG6 615 aa7.35□□□□□ -1.23
KRT39-202ENST00000578029 C2orf49Q9BVC5 232 aaPredicted RBP7.35□□□□□ -1.23
KRT39-202ENST00000578029 BACH2Q9BYV9 841 aa7.35□□□□□ -1.23
KRT39-202ENST00000578029 PRKD2Q9BZL6 878 aa7.35□□□□□ -1.23
KRT39-202ENST00000578029 SCHIP1Q9P0W5 487 aaPredicted RBP7.35□□□□□ -1.23
KRT39-202ENST00000578029 SCAMP3O14828 347 aaKnown RBP7.34□□□□□ -1.23
KRT39-202ENST00000578029 RPIAP49247 311 aa7.34□□□□□ -1.23
KRT39-202ENST00000578029 SMTNP53814 917 aa7.34□□□□□ -1.23
KRT39-202ENST00000578029 PSMA6P60900 246 aaKnown RBP7.34□□□□□ -1.23
KRT39-202ENST00000578029 DSC3Q14574 896 aa7.34□□□□□ -1.23
KRT39-202ENST00000578029 MTFR1Q15390 333 aa7.34□□□□□ -1.23
KRT39-202ENST00000578029 COX20Q5RI15 118 aa7.34□□□□□ -1.23
KRT39-202ENST00000578029 SLC9A9Q8IVB4 645 aa7.34□□□□□ -1.23
KRT39-202ENST00000578029 CCDC116Q8IYX3 515 aa7.34□□□□□ -1.23
KRT39-202ENST00000578029 ZNF784Q8NCA9 323 aaPredicted RBP7.34□□□□□ -1.23
KRT39-202ENST00000578029 RNF223E7ERA6 249 aa7.33□□□□□ -1.24
KRT39-202ENST00000578029 FZD6O60353 706 aa7.33□□□□□ -1.24
KRT39-202ENST00000578029 PRPF40AO75400 957 aaKnown RBP7.33□□□□□ -1.24
KRT39-202ENST00000578029 LDHBP07195 334 aaKnown RBP7.33□□□□□ -1.24
KRT39-202ENST00000578029 BRD2P25440 801 aaKnown RBP7.33□□□□□ -1.24
KRT39-202ENST00000578029 ERCC5P28715 1186 aaPredicted RBP7.33□□□□□ -1.24
KRT39-202ENST00000578029 GRM5P41594 1212 aa7.33□□□□□ -1.24
KRT39-202ENST00000578029 MAPK8P45983 427 aa7.33□□□□□ -1.24
KRT39-202ENST00000578029 CCDC87Q9NVE4 849 aa7.33□□□□□ -1.24
KRT39-202ENST00000578029 TNFRSF10BO14763 440 aa7.32□□□□□ -1.24
KRT39-202ENST00000578029 LILRA1O75019 489 aa7.32□□□□□ -1.24
KRT39-202ENST00000578029 CD2BP2O95400 341 aaKnown RBP7.32□□□□□ -1.24
KRT39-202ENST00000578029 ATP2B2Q01814 1243 aa7.32□□□□□ -1.24
KRT39-202ENST00000578029 KCNC4Q03721 635 aa7.32□□□□□ -1.24
KRT39-202ENST00000578029 EHHADHQ08426 723 aa7.32□□□□□ -1.24
KRT39-202ENST00000578029 NR5A1Q13285 461 aa7.32□□□□□ -1.24
KRT39-202ENST00000578029 SF3A1Q15459 793 aaKnown RBP7.32□□□□□ -1.24
KRT39-202ENST00000578029 NAALADL2Q58DX5 795 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms