RNA–Protein interactions for RNA: ENST00000577943.2

RN7SL560P-201, Transcript of RNA, 7SL, cytoplasmic 560, pseudogene, humanhuman

BASIC

Gene RN7SL560P, Length 264 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL560P-201ENST00000577943 SULT6B1Q6IMI4 303 aa20.33■□□□□ 0.85
RN7SL560P-201ENST00000577943 AEBP1Q8IUX7 1158 aa20.33■□□□□ 0.85
RN7SL560P-201ENST00000577943 NLGN2Q8NFZ4 835 aa20.33■□□□□ 0.85
RN7SL560P-201ENST00000577943 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.32■□□□□ 0.84
RN7SL560P-201ENST00000577943 C1orf141Q5JVX7 400 aa20.32■□□□□ 0.84
RN7SL560P-201ENST00000577943 AMIGO3Q86WK7 504 aa20.32■□□□□ 0.84
RN7SL560P-201ENST00000577943 VIRMAQ69YN4 1812 aaKnown RBP20.32■□□□□ 0.84
RN7SL560P-201ENST00000577943 SSFA2P28290 1259 aa20.31■□□□□ 0.84
RN7SL560P-201ENST00000577943 IL13P35225 146 aa20.31■□□□□ 0.84
RN7SL560P-201ENST00000577943 ITPK1Q13572 414 aa20.31■□□□□ 0.84
RN7SL560P-201ENST00000577943 SMIM5Q71RC9 77 aa20.31■□□□□ 0.84
RN7SL560P-201ENST00000577943 CABP4P57796 275 aa20.3■□□□□ 0.84
RN7SL560P-201ENST00000577943 RBM42Q9BTD8 480 aaKnown RBP20.3■□□□□ 0.84
RN7SL560P-201ENST00000577943 SCN11AQ9UI33 1791 aa20.3■□□□□ 0.84
RN7SL560P-201ENST00000577943 ZNF831Q5JPB2 1677 aa20.29■□□□□ 0.84
RN7SL560P-201ENST00000577943 KDM6AO15550 1401 aaPredicted RBP20.29■□□□□ 0.84
RN7SL560P-201ENST00000577943 GNPATO15228 680 aa20.29■□□□□ 0.84
RN7SL560P-201ENST00000577943 MTHFSP49914 203 aa20.29■□□□□ 0.84
RN7SL560P-201ENST00000577943 CC2D1BQ5T0F9 858 aaKnown RBP20.29■□□□□ 0.84
RN7SL560P-201ENST00000577943 ZNF784Q8NCA9 323 aaPredicted RBP20.28■□□□□ 0.84
RN7SL560P-201ENST00000577943 KDRP35968 1356 aa20.28■□□□□ 0.84
RN7SL560P-201ENST00000577943 COL5A3P25940 1745 aaPredicted RBP20.27■□□□□ 0.84
RN7SL560P-201ENST00000577943 PER1O15534 1290 aaPredicted RBP20.27■□□□□ 0.84
RN7SL560P-201ENST00000577943 CD2APQ9Y5K6 639 aa20.26■□□□□ 0.83
RN7SL560P-201ENST00000577943 MYH14Q7Z406 1995 aaKnown RBP20.26■□□□□ 0.83
RN7SL560P-201ENST00000577943 CNGB1Q14028 1251 aaPredicted RBP20.24■□□□□ 0.83
RN7SL560P-201ENST00000577943 SLC4A9Q96Q91 983 aa20.24■□□□□ 0.83
RN7SL560P-201ENST00000577943 RTCBQ9Y3I0 505 aaKnown RBP20.24■□□□□ 0.83
RN7SL560P-201ENST00000577943 HMOX1P09601 288 aa20.23■□□□□ 0.83
RN7SL560P-201ENST00000577943 NFATC2IPQ8NCF5 419 aa20.23■□□□□ 0.83
RN7SL560P-201ENST00000577943 GRIN3BO60391 1043 aa20.22■□□□□ 0.83
RN7SL560P-201ENST00000577943 DIAPH1O60610 1272 aaKnown RBP20.22■□□□□ 0.83
RN7SL560P-201ENST00000577943 PTCD1O75127 700 aaKnown RBP20.22■□□□□ 0.83
RN7SL560P-201ENST00000577943 YBX3P16989 372 aaKnown RBP eCLIP20.22■□□□□ 0.83
RN7SL560P-201ENST00000577943 AKAP4Q5JQC9 854 aa20.22■□□□□ 0.83
RN7SL560P-201ENST00000577943 TRAPPC3LQ5T215 181 aa20.22■□□□□ 0.83
RN7SL560P-201ENST00000577943 RC3H1Q5TC82 1133 aaKnown RBP20.21■□□□□ 0.83
RN7SL560P-201ENST00000577943 CNTNAP4Q9C0A0 1308 aa20.2■□□□□ 0.82
RN7SL560P-201ENST00000577943 NPC1L1Q9UHC9 1359 aa20.19■□□□□ 0.82
RN7SL560P-201ENST00000577943 C4AP0C0L4 1744 aa20.19■□□□□ 0.82
RN7SL560P-201ENST00000577943 RPS6KA4O75676 772 aa20.18■□□□□ 0.82
RN7SL560P-201ENST00000577943 TJP1Q07157 1748 aa20.17■□□□□ 0.82
RN7SL560P-201ENST00000577943 MMP10P09238 476 aa20.17■□□□□ 0.82
RN7SL560P-201ENST00000577943 ADRA2BP18089 450 aa20.17■□□□□ 0.82
RN7SL560P-201ENST00000577943 RFC4P35249 363 aa20.17■□□□□ 0.82
RN7SL560P-201ENST00000577943 ARHGEF1Q92888 912 aaKnown RBP20.17■□□□□ 0.82
RN7SL560P-201ENST00000577943 LGR6Q9HBX8 967 aa20.17■□□□□ 0.82
RN7SL560P-201ENST00000577943 KIF13BQ9NQT8 1826 aa20.16■□□□□ 0.82
RN7SL560P-201ENST00000577943 SLC52A2Q9HAB3 445 aa20.16■□□□□ 0.82
RN7SL560P-201ENST00000577943 RNMTO43148 476 aaKnown RBP20.15■□□□□ 0.82
RN7SL560P-201ENST00000577943 CRKLP46109 303 aaKnown RBP20.15■□□□□ 0.82
RN7SL560P-201ENST00000577943 MTHFSDQ2M296 383 aaKnown RBP20.15■□□□□ 0.82
RN7SL560P-201ENST00000577943 NLGN1Q8N2Q7 840 aa20.15■□□□□ 0.82
RN7SL560P-201ENST00000577943 WWC3Q9ULE0 1092 aa20.15■□□□□ 0.82
RN7SL560P-201ENST00000577943 CICQ96RK0 1608 aaPredicted RBP20.15■□□□□ 0.82
RN7SL560P-201ENST00000577943 N4BP2Q86UW6 1770 aaPredicted RBP20.14■□□□□ 0.81
RN7SL560P-201ENST00000577943 U2SURPO15042 1029 aaKnown RBP20.14■□□□□ 0.81
RN7SL560P-201ENST00000577943 COL3A1P02461 1466 aaPredicted RBP20.13■□□□□ 0.81
RN7SL560P-201ENST00000577943 MRC1P22897 1456 aa20.12■□□□□ 0.81
RN7SL560P-201ENST00000577943 GYS1P13807 737 aa20.12■□□□□ 0.81
RN7SL560P-201ENST00000577943 ADAMTS7Q9UKP4 1686 aa20.12■□□□□ 0.81
RN7SL560P-201ENST00000577943 SLC39A6Q13433 755 aa20.11■□□□□ 0.81
RN7SL560P-201ENST00000577943 PARP3Q9Y6F1 533 aa20.1■□□□□ 0.81
RN7SL560P-201ENST00000577943 DNAJC10Q8IXB1 793 aa20.09■□□□□ 0.81
RN7SL560P-201ENST00000577943 CCDC87Q9NVE4 849 aa20.09■□□□□ 0.81
RN7SL560P-201ENST00000577943 KIAA1551Q9HCM1 1747 aa20.09■□□□□ 0.81
RN7SL560P-201ENST00000577943 INTS5Q6P9B9 1019 aaKnown RBP20.08■□□□□ 0.81
RN7SL560P-201ENST00000577943 CFAP53Q96M91 514 aa20.08■□□□□ 0.81
RN7SL560P-201ENST00000577943 SRP68Q9UHB9 627 aaKnown RBP20.08■□□□□ 0.81
RN7SL560P-201ENST00000577943 UBR2Q8IWV8 1755 aa20.08■□□□□ 0.8
RN7SL560P-201ENST00000577943 TGFB2P61812 414 aa20.07■□□□□ 0.8
RN7SL560P-201ENST00000577943 GAS2L2Q8NHY3 880 aa20.07■□□□□ 0.8
RN7SL560P-201ENST00000577943 KCPQ6ZWJ8 1503 aa20.07■□□□□ 0.8
RN7SL560P-201ENST00000577943 USP42Q9H9J4 1324 aaKnown RBP20.06■□□□□ 0.8
RN7SL560P-201ENST00000577943 PXDNLA1KZ92 1463 aa20.06■□□□□ 0.8
RN7SL560P-201ENST00000577943 GIGYF1O75420 1035 aaPredicted RBP20.06■□□□□ 0.8
RN7SL560P-201ENST00000577943 BRCA1P38398 1863 aaKnown RBP20.06■□□□□ 0.8
RN7SL560P-201ENST00000577943 C10orf71Q711Q0 1435 aa20.06■□□□□ 0.8
RN7SL560P-201ENST00000577943 GNAT3A8MTJ3 354 aa20.05■□□□□ 0.8
RN7SL560P-201ENST00000577943 C1QTNF8P60827 252 aa20.05■□□□□ 0.8
RN7SL560P-201ENST00000577943 SIPA1L3O60292 1781 aaPredicted RBP20.05■□□□□ 0.8
RN7SL560P-201ENST00000577943 A0A0G2JLW4 131 aa20.04■□□□□ 0.8
RN7SL560P-201ENST00000577943 ZPR1O75312 459 aa20.04■□□□□ 0.8
RN7SL560P-201ENST00000577943 CYP19A1P11511 503 aaPredicted RBP20.04■□□□□ 0.8
RN7SL560P-201ENST00000577943 TEFQ10587 303 aa20.04■□□□□ 0.8
RN7SL560P-201ENST00000577943 FKBP8Q14318 412 aa20.04■□□□□ 0.8
RN7SL560P-201ENST00000577943 TTC5Q8N0Z6 440 aa20.04■□□□□ 0.8
RN7SL560P-201ENST00000577943 ATP10DQ9P241 1426 aa20.03■□□□□ 0.8
RN7SL560P-201ENST00000577943 VSIG10Q8N0Z9 540 aa20.03■□□□□ 0.8
RN7SL560P-201ENST00000577943 NUDCQ9Y266 331 aa20.03■□□□□ 0.8
RN7SL560P-201ENST00000577943 SOS1Q07889 1333 aaPredicted RBP20.02■□□□□ 0.8
RN7SL560P-201ENST00000577943 PRKAR2BP31323 418 aa20.02■□□□□ 0.8
RN7SL560P-201ENST00000577943 IL17REQ8NFR9 667 aa20.02■□□□□ 0.8
RN7SL560P-201ENST00000577943 BCS1LQ9Y276 419 aa20.02■□□□□ 0.8
RN7SL560P-201ENST00000577943 DPEP1P16444 411 aa20.01■□□□□ 0.79
RN7SL560P-201ENST00000577943 USPL1Q5W0Q7 1092 aa20.01■□□□□ 0.79
RN7SL560P-201ENST00000577943 ZBTB1Q9Y2K1 713 aa20.01■□□□□ 0.79
RN7SL560P-201ENST00000577943 AFDNP55196 1824 aaKnown RBP20.01■□□□□ 0.79
RN7SL560P-201ENST00000577943 ARFGEF1Q9Y6D6 1849 aa20.01■□□□□ 0.79
RN7SL560P-201ENST00000577943 COL15A1P39059 1388 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms