RNA–Protein interactions for RNA: ENST00000577906.1

SNRPD1-202, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

TSL 2

Gene SNRPD1, Length 745 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-202ENST00000577906 TMEM214Q6NUQ4 689 aaKnown RBP12.37□□□□□ -0.43
SNRPD1-202ENST00000577906 NANOS1Q8WY41 292 aaKnown RBP12.37□□□□□ -0.43
SNRPD1-202ENST00000577906 GMPRP36959 345 aa12.36□□□□□ -0.43
SNRPD1-202ENST00000577906 TFIP11Q9UBB9 837 aaKnown RBP12.36□□□□□ -0.43
SNRPD1-202ENST00000577906 ZNF777Q9ULD5 760 aaPredicted RBP12.36□□□□□ -0.43
SNRPD1-202ENST00000577906 DYRK1BQ9Y463 629 aa12.36□□□□□ -0.43
SNRPD1-202ENST00000577906 ATP1A2P50993 1020 aa12.35□□□□□ -0.43
SNRPD1-202ENST00000577906 ZMYND15Q9H091 742 aa12.35□□□□□ -0.43
SNRPD1-202ENST00000577906 TIMMDC1Q9NPL8 285 aa12.34□□□□□ -0.43
SNRPD1-202ENST00000577906 TMEM229AB2RXF0 380 aa12.33□□□□□ -0.44
SNRPD1-202ENST00000577906 BACH1O14867 736 aa12.33□□□□□ -0.44
SNRPD1-202ENST00000577906 SMTNP53814 917 aa12.33□□□□□ -0.44
SNRPD1-202ENST00000577906 SV2AQ7L0J3 742 aa12.33□□□□□ -0.44
SNRPD1-202ENST00000577906 PPARGC1BQ86YN6 1023 aaKnown RBP12.33□□□□□ -0.44
SNRPD1-202ENST00000577906 SLC4A9Q96Q91 983 aa12.33□□□□□ -0.44
SNRPD1-202ENST00000577906 PPP1R12CQ9BZL4 782 aa12.33□□□□□ -0.44
SNRPD1-202ENST00000577906 MKRN1Q9UHC7 482 aaKnown RBP12.33□□□□□ -0.44
SNRPD1-202ENST00000577906 SERTAD1Q9UHV2 236 aa12.33□□□□□ -0.44
SNRPD1-202ENST00000577906 PALM3A6NDB9 673 aaPredicted RBP12.32□□□□□ -0.44
SNRPD1-202ENST00000577906 VWA5B2Q8N398 1253 aa12.32□□□□□ -0.44
SNRPD1-202ENST00000577906 RHBDD1Q8TEB9 315 aa12.32□□□□□ -0.44
SNRPD1-202ENST00000577906 GMCL1Q96IK5 515 aa12.32□□□□□ -0.44
SNRPD1-202ENST00000577906 MAFBQ9Y5Q3 323 aaPredicted RBP12.32□□□□□ -0.44
SNRPD1-202ENST00000577906 CDC14CA4D256 554 aa12.31□□□□□ -0.44
SNRPD1-202ENST00000577906 INSM1Q01101 510 aaPredicted RBP12.31□□□□□ -0.44
SNRPD1-202ENST00000577906 GAS2L1Q99501 681 aaPredicted RBP12.31□□□□□ -0.44
SNRPD1-202ENST00000577906 RIPOR1Q6ZS17 1223 aa12.3□□□□□ -0.44
SNRPD1-202ENST00000577906 H7C1W4 665 aa12.29□□□□□ -0.44
SNRPD1-202ENST00000577906 PHKA2P46019 1235 aa12.29□□□□□ -0.44
SNRPD1-202ENST00000577906 C4orf17Q53FE4 359 aa12.29□□□□□ -0.44
SNRPD1-202ENST00000577906 OGFOD1Q8N543 542 aa12.29□□□□□ -0.44
SNRPD1-202ENST00000577906 DNAAF2Q9NVR5 837 aaKnown RBP12.29□□□□□ -0.44
SNRPD1-202ENST00000577906 A6NJY4 79 aa12.28□□□□□ -0.44
SNRPD1-202ENST00000577906 F11P03951 625 aa12.28□□□□□ -0.44
SNRPD1-202ENST00000577906 TRIM22Q8IYM9 498 aa12.28□□□□□ -0.44
SNRPD1-202ENST00000577906 LARGE2Q8N3Y3 721 aa12.28□□□□□ -0.44
SNRPD1-202ENST00000577906 ZNF358Q9NW07 568 aa12.28□□□□□ -0.44
SNRPD1-202ENST00000577906 A0A1B0GTH6 734 aa12.27□□□□□ -0.45
SNRPD1-202ENST00000577906 CDK2AP1O14519 115 aa12.27□□□□□ -0.45
SNRPD1-202ENST00000577906 ZBTB7BO15156 539 aaPredicted RBP12.27□□□□□ -0.45
SNRPD1-202ENST00000577906 CLDN10P78369 228 aa12.27□□□□□ -0.45
SNRPD1-202ENST00000577906 MTFR1Q15390 333 aa12.27□□□□□ -0.45
SNRPD1-202ENST00000577906 CCDC102BQ68D86 513 aa12.27□□□□□ -0.45
SNRPD1-202ENST00000577906 GPR161Q8N6U8 529 aaKnown RBP12.27□□□□□ -0.45
SNRPD1-202ENST00000577906 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.27□□□□□ -0.45
SNRPD1-202ENST00000577906 TPCN2Q8NHX9 752 aa12.27□□□□□ -0.45
SNRPD1-202ENST00000577906 NIFKQ9BYG3 293 aaKnown RBP12.27□□□□□ -0.45
SNRPD1-202ENST00000577906 RBM19Q9Y4C8 960 aaKnown RBP12.27□□□□□ -0.45
SNRPD1-202ENST00000577906 CUEDC1Q9NWM3 386 aaPredicted RBP12.26□□□□□ -0.45
SNRPD1-202ENST00000577906 LMOD1P29536 600 aaPredicted RBP12.25□□□□□ -0.45
SNRPD1-202ENST00000577906 FOXR1Q6PIV2 292 aa12.25□□□□□ -0.45
SNRPD1-202ENST00000577906 RASA1P20936 1047 aa12.24□□□□□ -0.45
SNRPD1-202ENST00000577906 ZNF837Q96EG3 531 aaPredicted RBP12.24□□□□□ -0.45
SNRPD1-202ENST00000577906 KIAA1024Q9UPX6 916 aa12.24□□□□□ -0.45
SNRPD1-202ENST00000577906 DBN1Q16643 649 aa12.23□□□□□ -0.45
SNRPD1-202ENST00000577906 LARP1Q6PKG0 1096 aaKnown RBP12.23□□□□□ -0.45
SNRPD1-202ENST00000577906 COL25A1Q9BXS0 654 aaPredicted RBP12.23□□□□□ -0.45
SNRPD1-202ENST00000577906 PLA2G4AP47712 749 aa12.22□□□□□ -0.45
SNRPD1-202ENST00000577906 SIX5Q8N196 739 aa12.22□□□□□ -0.45
SNRPD1-202ENST00000577906 ZNF594Q96JF6 807 aaPredicted RBP12.22□□□□□ -0.45
SNRPD1-202ENST00000577906 VRTNQ9H8Y1 702 aa12.22□□□□□ -0.45
SNRPD1-202ENST00000577906 GPAMQ9HCL2 828 aa12.22□□□□□ -0.45
SNRPD1-202ENST00000577906 SCHIP1Q9P0W5 487 aaPredicted RBP12.22□□□□□ -0.45
SNRPD1-202ENST00000577906 IQSEC3Q9UPP2 1182 aaPredicted RBP12.22□□□□□ -0.45
SNRPD1-202ENST00000577906 M0R2N6 131 aa12.21□□□□□ -0.45
SNRPD1-202ENST00000577906 CSB-PGBD3P0DP91 1061 aa12.21□□□□□ -0.45
SNRPD1-202ENST00000577906 PGBD3Q8N328 593 aa12.21□□□□□ -0.45
SNRPD1-202ENST00000577906 NUCKS1Q9H1E3 243 aaKnown RBP12.21□□□□□ -0.45
SNRPD1-202ENST00000577906 CABP1Q9NZU7 370 aa12.21□□□□□ -0.45
SNRPD1-202ENST00000577906 MSX1P28360 303 aa12.2□□□□□ -0.46
SNRPD1-202ENST00000577906 KANK4Q5T7N3 995 aaPredicted RBP12.2□□□□□ -0.46
SNRPD1-202ENST00000577906 CNTNAP3BQ96NU0 1288 aa12.2□□□□□ -0.46
SNRPD1-202ENST00000577906 CNTNAP3Q9BZ76 1288 aa12.2□□□□□ -0.46
SNRPD1-202ENST00000577906 LBRQ14739 615 aaKnown RBP12.19□□□□□ -0.46
SNRPD1-202ENST00000577906 TNS4Q8IZW8 715 aa12.19□□□□□ -0.46
SNRPD1-202ENST00000577906 C1orf216Q8TAB5 229 aa12.19□□□□□ -0.46
SNRPD1-202ENST00000577906 AIDAQ96BJ3 306 aa12.19□□□□□ -0.46
SNRPD1-202ENST00000577906 EPHA4P54764 986 aa12.18□□□□□ -0.46
SNRPD1-202ENST00000577906 NBPF1Q3BBV0 1214 aa12.18□□□□□ -0.46
SNRPD1-202ENST00000577906 CFAP70Q5T0N1 1121 aa12.18□□□□□ -0.46
SNRPD1-202ENST00000577906 ZNF295-AS1Q8N0V1 137 aa12.18□□□□□ -0.46
SNRPD1-202ENST00000577906 ZSCAN1Q8NBB4 408 aa12.18□□□□□ -0.46
SNRPD1-202ENST00000577906 GTPBP3Q969Y2 492 aaKnown RBP12.18□□□□□ -0.46
SNRPD1-202ENST00000577906 TRERF1Q96PN7 1200 aa12.18□□□□□ -0.46
SNRPD1-202ENST00000577906 FOXK2Q01167 660 aa12.17□□□□□ -0.46
SNRPD1-202ENST00000577906 KRT76Q01546 638 aa12.17□□□□□ -0.46
SNRPD1-202ENST00000577906 USP3Q9Y6I4 520 aa12.17□□□□□ -0.46
SNRPD1-202ENST00000577906 FAM196BA6NMK8 535 aa12.16□□□□□ -0.46
SNRPD1-202ENST00000577906 SEC13P55735 322 aa12.16□□□□□ -0.46
SNRPD1-202ENST00000577906 EFHC2Q5JST6 749 aa12.16□□□□□ -0.46
SNRPD1-202ENST00000577906 RNFT1Q5M7Z0 435 aa12.16□□□□□ -0.46
SNRPD1-202ENST00000577906 SLC9A9Q8IVB4 645 aa12.16□□□□□ -0.46
SNRPD1-202ENST00000577906 RUBCNLQ9H714 662 aa12.16□□□□□ -0.46
SNRPD1-202ENST00000577906 STK17AQ9UEE5 414 aa12.16□□□□□ -0.46
SNRPD1-202ENST00000577906 SFI1A8K8P3 1242 aa12.15□□□□□ -0.46
SNRPD1-202ENST00000577906 DKK1O94907 266 aa12.15□□□□□ -0.46
SNRPD1-202ENST00000577906 TATP17735 454 aaPredicted RBP12.15□□□□□ -0.46
SNRPD1-202ENST00000577906 PTK7Q13308 1070 aa12.15□□□□□ -0.46
SNRPD1-202ENST00000577906 TEAD4Q15561 434 aa12.15□□□□□ -0.46
SNRPD1-202ENST00000577906 C14orf37Q86TY3 774 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms