RNA–Protein interactions for RNA: ENST00000577854.1

CDKN2A-211, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 442 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-211ENST00000577854 LGR6Q9HBX8 967 aa12.29□□□□□ -0.44
CDKN2A-211ENST00000577854 ATG3Q9NT62 314 aa12.29□□□□□ -0.44
CDKN2A-211ENST00000577854 MAP3K5Q99683 1374 aa12.29□□□□□ -0.44
CDKN2A-211ENST00000577854 GNAT3A8MTJ3 354 aa12.28□□□□□ -0.44
CDKN2A-211ENST00000577854 TEFQ10587 303 aa12.28□□□□□ -0.44
CDKN2A-211ENST00000577854 KLHL34Q8N239 644 aa12.28□□□□□ -0.44
CDKN2A-211ENST00000577854 RTF1Q92541 710 aaKnown RBP12.28□□□□□ -0.44
CDKN2A-211ENST00000577854 MYBBP1AQ9BQG0 1328 aaKnown RBP12.28□□□□□ -0.44
CDKN2A-211ENST00000577854 MAPK8IP3Q9UPT6 1336 aa12.28□□□□□ -0.44
CDKN2A-211ENST00000577854 FCHSD2O94868 740 aa12.27□□□□□ -0.45
CDKN2A-211ENST00000577854 PHACTR3Q96KR7 559 aa12.27□□□□□ -0.45
CDKN2A-211ENST00000577854 MTFR1LQ9H019 292 aa12.27□□□□□ -0.45
CDKN2A-211ENST00000577854 SLC52A2Q9HAB3 445 aa12.27□□□□□ -0.45
CDKN2A-211ENST00000577854 GNPATO15228 680 aa12.26□□□□□ -0.45
CDKN2A-211ENST00000577854 WDR43Q15061 677 aaKnown RBP eCLIP12.26□□□□□ -0.45
CDKN2A-211ENST00000577854 TTC5Q8N0Z6 440 aa12.26□□□□□ -0.45
CDKN2A-211ENST00000577854 LINC00116Q8NCU8 138 aa12.26□□□□□ -0.45
CDKN2A-211ENST00000577854 PNPLA7Q6ZV29 1317 aa12.26□□□□□ -0.45
CDKN2A-211ENST00000577854 PAPPAQ13219 1627 aa12.26□□□□□ -0.45
CDKN2A-211ENST00000577854 ITGB4P16144 1822 aa12.25□□□□□ -0.45
CDKN2A-211ENST00000577854 POLD1P28340 1107 aa12.25□□□□□ -0.45
CDKN2A-211ENST00000577854 SLC39A6Q13433 755 aa12.25□□□□□ -0.45
CDKN2A-211ENST00000577854 MSL1Q68DK7 614 aa12.25□□□□□ -0.45
CDKN2A-211ENST00000577854 PNNQ9H307 717 aaKnown RBP12.25□□□□□ -0.45
CDKN2A-211ENST00000577854 LRP5O75197 1615 aa12.25□□□□□ -0.45
CDKN2A-211ENST00000577854 LY75O60449 1722 aa12.25□□□□□ -0.45
CDKN2A-211ENST00000577854 ITPK1Q13572 414 aa12.24□□□□□ -0.45
CDKN2A-211ENST00000577854 SMIM5Q71RC9 77 aa12.24□□□□□ -0.45
CDKN2A-211ENST00000577854 FLAD1Q8NFF5 587 aa12.24□□□□□ -0.45
CDKN2A-211ENST00000577854 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.23□□□□□ -0.45
CDKN2A-211ENST00000577854 MCM10Q7L590 875 aa12.23□□□□□ -0.45
CDKN2A-211ENST00000577854 COL23A1Q86Y22 540 aaPredicted RBP12.23□□□□□ -0.45
CDKN2A-211ENST00000577854 SLC16A10Q8TF71 515 aa12.23□□□□□ -0.45
CDKN2A-211ENST00000577854 PRKRIP1Q9H875 184 aaPredicted RBP12.23□□□□□ -0.45
CDKN2A-211ENST00000577854 DCTN1Q14203 1278 aa12.22□□□□□ -0.45
CDKN2A-211ENST00000577854 IL17REQ8NFR9 667 aa12.22□□□□□ -0.45
CDKN2A-211ENST00000577854 ARXQ96QS3 562 aa12.22□□□□□ -0.45
CDKN2A-211ENST00000577854 RTCBQ9Y3I0 505 aaKnown RBP12.22□□□□□ -0.45
CDKN2A-211ENST00000577854 C5P01031 1676 aa12.22□□□□□ -0.45
CDKN2A-211ENST00000577854 CASZ1Q86V15 1759 aa12.21□□□□□ -0.45
CDKN2A-211ENST00000577854 C4BP0C0L5 1744 aa12.21□□□□□ -0.45
CDKN2A-211ENST00000577854 DCAF8L1A6NGE4 600 aa12.21□□□□□ -0.45
CDKN2A-211ENST00000577854 BTBD11A6QL63 1104 aa12.21□□□□□ -0.45
CDKN2A-211ENST00000577854 ANP32CO43423 234 aa12.21□□□□□ -0.45
CDKN2A-211ENST00000577854 CCDC146Q8IYE0 955 aa12.21□□□□□ -0.45
CDKN2A-211ENST00000577854 SLC4A9Q96Q91 983 aa12.21□□□□□ -0.45
CDKN2A-211ENST00000577854 SSFA2P28290 1259 aa12.2□□□□□ -0.46
CDKN2A-211ENST00000577854 PTGER2P43116 358 aa12.2□□□□□ -0.46
CDKN2A-211ENST00000577854 CRKLP46109 303 aaKnown RBP12.2□□□□□ -0.46
CDKN2A-211ENST00000577854 NEUROD2Q15784 382 aa12.2□□□□□ -0.46
CDKN2A-211ENST00000577854 DNAJC10Q8IXB1 793 aa12.2□□□□□ -0.46
CDKN2A-211ENST00000577854 RFC4P35249 363 aa12.19□□□□□ -0.46
CDKN2A-211ENST00000577854 TRAPPC3LQ5T215 181 aa12.19□□□□□ -0.46
CDKN2A-211ENST00000577854 AMIGO3Q86WK7 504 aa12.19□□□□□ -0.46
CDKN2A-211ENST00000577854 FHDC1Q9C0D6 1143 aaPredicted RBP12.19□□□□□ -0.46
CDKN2A-211ENST00000577854 ZNF330Q9Y3S2 320 aaPredicted RBP12.19□□□□□ -0.46
CDKN2A-211ENST00000577854 MRC1P22897 1456 aa12.19□□□□□ -0.46
CDKN2A-211ENST00000577854 SCN11AQ9UI33 1791 aa12.18□□□□□ -0.46
CDKN2A-211ENST00000577854 CNTNAP4Q9C0A0 1308 aa12.18□□□□□ -0.46
CDKN2A-211ENST00000577854 NFE2L2Q16236 605 aa12.18□□□□□ -0.46
CDKN2A-211ENST00000577854 ZNF790Q6PG37 636 aa12.18□□□□□ -0.46
CDKN2A-211ENST00000577854 NPM2Q86SE8 214 aaKnown RBP12.18□□□□□ -0.46
CDKN2A-211ENST00000577854 FMNL2Q96PY5 1086 aa12.18□□□□□ -0.46
CDKN2A-211ENST00000577854 HTATSF1O43719 755 aaKnown RBP12.17□□□□□ -0.46
CDKN2A-211ENST00000577854 STARD3NLO95772 234 aa12.17□□□□□ -0.46
CDKN2A-211ENST00000577854 RIPK4P57078 832 aa12.17□□□□□ -0.46
CDKN2A-211ENST00000577854 RC3H1Q5TC82 1133 aaKnown RBP12.17□□□□□ -0.46
CDKN2A-211ENST00000577854 PELP1Q8IZL8 1130 aaKnown RBP12.17□□□□□ -0.46
CDKN2A-211ENST00000577854 PLEKHF1Q96S99 279 aa12.17□□□□□ -0.46
CDKN2A-211ENST00000577854 THUMPD2Q9BTF0 503 aaKnown RBP12.17□□□□□ -0.46
CDKN2A-211ENST00000577854 CCDC87Q9NVE4 849 aa12.17□□□□□ -0.46
CDKN2A-211ENST00000577854 RRP7AQ9Y3A4 280 aaKnown RBP12.17□□□□□ -0.46
CDKN2A-211ENST00000577854 CEMIPQ8WUJ3 1361 aa12.17□□□□□ -0.46
CDKN2A-211ENST00000577854 RPS6KA4O75676 772 aa12.16□□□□□ -0.46
CDKN2A-211ENST00000577854 CANXP27824 592 aaKnown RBP12.16□□□□□ -0.46
CDKN2A-211ENST00000577854 ZNF496Q96IT1 587 aaPredicted RBP12.16□□□□□ -0.46
CDKN2A-211ENST00000577854 ADAMTS8Q9UP79 889 aa12.16□□□□□ -0.46
CDKN2A-211ENST00000577854 KCNQ3O43525 872 aa12.15□□□□□ -0.46
CDKN2A-211ENST00000577854 ADRA2BP18089 450 aa12.15□□□□□ -0.46
CDKN2A-211ENST00000577854 LMOD3Q0VAK6 560 aa12.15□□□□□ -0.46
CDKN2A-211ENST00000577854 TAF7Q15545 349 aaPredicted RBP12.15□□□□□ -0.46
CDKN2A-211ENST00000577854 ARHGEF1Q92888 912 aaKnown RBP12.15□□□□□ -0.46
CDKN2A-211ENST00000577854 SGIP1Q9BQI5 828 aa12.15□□□□□ -0.46
CDKN2A-211ENST00000577854 MIS18AQ9NYP9 233 aa12.15□□□□□ -0.46
CDKN2A-211ENST00000577854 TAF1LQ8IZX4 1826 aa12.15□□□□□ -0.46
CDKN2A-211ENST00000577854 TUBGCP6Q96RT7 1819 aa12.15□□□□□ -0.46
CDKN2A-211ENST00000577854 ZPR1O75312 459 aa12.14□□□□□ -0.47
CDKN2A-211ENST00000577854 CYP19A1P11511 503 aaPredicted RBP12.14□□□□□ -0.47
CDKN2A-211ENST00000577854 VSIG10Q8N0Z9 540 aa12.14□□□□□ -0.47
CDKN2A-211ENST00000577854 RUNDC1Q96C34 613 aa12.14□□□□□ -0.47
CDKN2A-211ENST00000577854 SYT17Q9BSW7 474 aa12.14□□□□□ -0.47
CDKN2A-211ENST00000577854 MRS2Q9HD23 443 aa12.14□□□□□ -0.47
CDKN2A-211ENST00000577854 LAS1LQ9Y4W2 734 aaKnown RBP12.14□□□□□ -0.47
CDKN2A-211ENST00000577854 KCPQ6ZWJ8 1503 aa12.14□□□□□ -0.47
CDKN2A-211ENST00000577854 HEG1Q9ULI3 1381 aa12.14□□□□□ -0.47
CDKN2A-211ENST00000577854 MMP10P09238 476 aa12.13□□□□□ -0.47
CDKN2A-211ENST00000577854 TMPOP42166 694 aaKnown RBP12.13□□□□□ -0.47
CDKN2A-211ENST00000577854 INTS5Q6P9B9 1019 aaKnown RBP12.13□□□□□ -0.47
CDKN2A-211ENST00000577854 PNISRQ8TF01 805 aaKnown RBP12.13□□□□□ -0.47
CDKN2A-211ENST00000577854 TEX13AQ9BXU3 409 aaPredicted RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms