RNA–Protein interactions for RNA: ENST00000577530.1

CCDC57-210, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 649 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-210ENST00000577530 ZNF530Q6P9A1 599 aaPredicted RBP14.16□□□□□ -0.14
CCDC57-210ENST00000577530 UBR3Q6ZT12 1888 aa14.15□□□□□ -0.14
CCDC57-210ENST00000577530 NPC1L1Q9UHC9 1359 aa14.15□□□□□ -0.14
CCDC57-210ENST00000577530 ASAP1Q9ULH1 1129 aa14.15□□□□□ -0.14
CCDC57-210ENST00000577530 ZNF831Q5JPB2 1677 aa14.14□□□□□ -0.15
CCDC57-210ENST00000577530 KLHL34Q8N239 644 aa14.14□□□□□ -0.15
CCDC57-210ENST00000577530 ATG3Q9NT62 314 aa14.14□□□□□ -0.15
CCDC57-210ENST00000577530 KDM6AO15550 1401 aaPredicted RBP14.14□□□□□ -0.15
CCDC57-210ENST00000577530 HMOX1P09601 288 aa14.13□□□□□ -0.15
CCDC57-210ENST00000577530 SSFA2P28290 1259 aa14.13□□□□□ -0.15
CCDC57-210ENST00000577530 ATP6V1AP38606 617 aa14.13□□□□□ -0.15
CCDC57-210ENST00000577530 CABP4P57796 275 aa14.13□□□□□ -0.15
CCDC57-210ENST00000577530 LINC00116Q8NCU8 138 aa14.12□□□□□ -0.15
CCDC57-210ENST00000577530 CHD4Q14839 1912 aa14.11□□□□□ -0.15
CCDC57-210ENST00000577530 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.11□□□□□ -0.15
CCDC57-210ENST00000577530 DIAPH1O60610 1272 aaKnown RBP14.11□□□□□ -0.15
CCDC57-210ENST00000577530 PHF14O94880 888 aa14.11□□□□□ -0.15
CCDC57-210ENST00000577530 ITPK1Q13572 414 aa14.11□□□□□ -0.15
CCDC57-210ENST00000577530 MSL1Q68DK7 614 aa14.11□□□□□ -0.15
CCDC57-210ENST00000577530 SCN11AQ9UI33 1791 aa14.11□□□□□ -0.15
CCDC57-210ENST00000577530 GNPATO15228 680 aa14.1□□□□□ -0.15
CCDC57-210ENST00000577530 GPR162Q16538 588 aa14.1□□□□□ -0.15
CCDC57-210ENST00000577530 RBM42Q9BTD8 480 aaKnown RBP14.1□□□□□ -0.15
CCDC57-210ENST00000577530 COL5A3P25940 1745 aaPredicted RBP14.1□□□□□ -0.15
CCDC57-210ENST00000577530 U2SURPO15042 1029 aaKnown RBP14.09□□□□□ -0.15
CCDC57-210ENST00000577530 AKAP4Q5JQC9 854 aa14.09□□□□□ -0.15
CCDC57-210ENST00000577530 SMIM5Q71RC9 77 aa14.08□□□□□ -0.16
CCDC57-210ENST00000577530 AMIGO3Q86WK7 504 aa14.08□□□□□ -0.16
CCDC57-210ENST00000577530 CD2APQ9Y5K6 639 aa14.08□□□□□ -0.16
CCDC57-210ENST00000577530 CNTNAP4Q9C0A0 1308 aa14.08□□□□□ -0.16
CCDC57-210ENST00000577530 COL3A1P02461 1466 aaPredicted RBP14.07□□□□□ -0.16
CCDC57-210ENST00000577530 RC3H1Q5TC82 1133 aaKnown RBP14.07□□□□□ -0.16
CCDC57-210ENST00000577530 NFATC2IPQ8NCF5 419 aa14.07□□□□□ -0.16
CCDC57-210ENST00000577530 NLGN2Q8NFZ4 835 aa14.07□□□□□ -0.16
CCDC57-210ENST00000577530 RTCBQ9Y3I0 505 aaKnown RBP14.07□□□□□ -0.16
CCDC57-210ENST00000577530 CICQ96RK0 1608 aaPredicted RBP14.07□□□□□ -0.16
CCDC57-210ENST00000577530 PPP2R1AP30153 589 aa14.06□□□□□ -0.16
CCDC57-210ENST00000577530 PELP1Q8IZL8 1130 aaKnown RBP14.06□□□□□ -0.16
CCDC57-210ENST00000577530 VIRMAQ69YN4 1812 aaKnown RBP14.06□□□□□ -0.16
CCDC57-210ENST00000577530 MRC1P22897 1456 aa14.06□□□□□ -0.16
CCDC57-210ENST00000577530 MTHFSDQ2M296 383 aaKnown RBP14.05□□□□□ -0.16
CCDC57-210ENST00000577530 TRAPPC3LQ5T215 181 aa14.05□□□□□ -0.16
CCDC57-210ENST00000577530 SLC4A9Q96Q91 983 aa14.05□□□□□ -0.16
CCDC57-210ENST00000577530 ADAMTS7Q9UKP4 1686 aa14.04□□□□□ -0.16
CCDC57-210ENST00000577530 GRIN3BO60391 1043 aa14.04□□□□□ -0.16
CCDC57-210ENST00000577530 PTCD1O75127 700 aaKnown RBP14.04□□□□□ -0.16
CCDC57-210ENST00000577530 CFAP53Q96M91 514 aa14.04□□□□□ -0.16
CCDC57-210ENST00000577530 SLC52A2Q9HAB3 445 aa14.04□□□□□ -0.16
CCDC57-210ENST00000577530 LGR6Q9HBX8 967 aa14.04□□□□□ -0.16
CCDC57-210ENST00000577530 TJP1Q07157 1748 aa14.04□□□□□ -0.16
CCDC57-210ENST00000577530 RNMTO43148 476 aaKnown RBP14.03□□□□□ -0.16
CCDC57-210ENST00000577530 RPS6KA4O75676 772 aa14.03□□□□□ -0.16
CCDC57-210ENST00000577530 RFC4P35249 363 aa14.02□□□□□ -0.17
CCDC57-210ENST00000577530 DDX10Q13206 875 aaKnown RBP14.02□□□□□ -0.17
CCDC57-210ENST00000577530 NLGN1Q8N2Q7 840 aa14.02□□□□□ -0.17
CCDC57-210ENST00000577530 MYH14Q7Z406 1995 aaKnown RBP14.02□□□□□ -0.17
CCDC57-210ENST00000577530 C4AP0C0L4 1744 aa14.01□□□□□ -0.17
CCDC57-210ENST00000577530 ZNF784Q8NCA9 323 aaPredicted RBP14.01□□□□□ -0.17
CCDC57-210ENST00000577530 GAS2L2Q8NHY3 880 aa14.01□□□□□ -0.17
CCDC57-210ENST00000577530 ARHGEF1Q92888 912 aaKnown RBP14.01□□□□□ -0.17
CCDC57-210ENST00000577530 MMP10P09238 476 aa14□□□□□ -0.17
CCDC57-210ENST00000577530 YBX3P16989 372 aaKnown RBP eCLIP14□□□□□ -0.17
CCDC57-210ENST00000577530 CRKLP46109 303 aaKnown RBP14□□□□□ -0.17
CCDC57-210ENST00000577530 NUDCQ9Y266 331 aa14□□□□□ -0.17
CCDC57-210ENST00000577530 U2AF1L5P0DN76 240 aaPredicted RBP13.99□□□□□ -0.17
CCDC57-210ENST00000577530 PRKAR2BP31323 418 aa13.99□□□□□ -0.17
CCDC57-210ENST00000577530 U2AF1Q01081 240 aaKnown RBP eCLIP13.99□□□□□ -0.17
CCDC57-210ENST00000577530 PHACTR3Q96KR7 559 aa13.99□□□□□ -0.17
CCDC57-210ENST00000577530 KIF13BQ9NQT8 1826 aa13.99□□□□□ -0.17
CCDC57-210ENST00000577530 GNAT3A8MTJ3 354 aa13.98□□□□□ -0.17
CCDC57-210ENST00000577530 GYS1P13807 737 aa13.98□□□□□ -0.17
CCDC57-210ENST00000577530 SLC39A6Q13433 755 aa13.98□□□□□ -0.17
CCDC57-210ENST00000577530 RSPH6AQ9H0K4 717 aa13.98□□□□□ -0.17
CCDC57-210ENST00000577530 KCPQ6ZWJ8 1503 aa13.98□□□□□ -0.17
CCDC57-210ENST00000577530 UBR2Q8IWV8 1755 aa13.98□□□□□ -0.17
CCDC57-210ENST00000577530 HOXD11P31277 338 aaPredicted RBP13.97□□□□□ -0.17
CCDC57-210ENST00000577530 TTC5Q8N0Z6 440 aa13.97□□□□□ -0.17
CCDC57-210ENST00000577530 VSIG10Q8N0Z9 540 aa13.97□□□□□ -0.17
CCDC57-210ENST00000577530 CCDC87Q9NVE4 849 aa13.97□□□□□ -0.17
CCDC57-210ENST00000577530 PARP3Q9Y6F1 533 aa13.97□□□□□ -0.17
CCDC57-210ENST00000577530 USP42Q9H9J4 1324 aaKnown RBP13.96□□□□□ -0.17
CCDC57-210ENST00000577530 TEFQ10587 303 aa13.96□□□□□ -0.17
CCDC57-210ENST00000577530 INTS5Q6P9B9 1019 aaKnown RBP13.96□□□□□ -0.17
CCDC57-210ENST00000577530 DNAJC10Q8IXB1 793 aa13.96□□□□□ -0.17
CCDC57-210ENST00000577530 CNKSR2Q8WXI2 1034 aa13.96□□□□□ -0.17
CCDC57-210ENST00000577530 C10orf71Q711Q0 1435 aa13.96□□□□□ -0.18
CCDC57-210ENST00000577530 CYP19A1P11511 503 aaPredicted RBP13.95□□□□□ -0.18
CCDC57-210ENST00000577530 TGFB2P61812 414 aa13.95□□□□□ -0.18
CCDC57-210ENST00000577530 IL17REQ8NFR9 667 aa13.95□□□□□ -0.18
CCDC57-210ENST00000577530 SIPA1L3O60292 1781 aaPredicted RBP13.95□□□□□ -0.18
CCDC57-210ENST00000577530 PXDNLA1KZ92 1463 aa13.94□□□□□ -0.18
CCDC57-210ENST00000577530 UTRNP46939 3433 aa13.94□□□□□ -0.18
CCDC57-210ENST00000577530 SOS1Q07889 1333 aaPredicted RBP13.93□□□□□ -0.18
CCDC57-210ENST00000577530 KIAA1551Q9HCM1 1747 aa13.93□□□□□ -0.18
CCDC57-210ENST00000577530 ZPR1O75312 459 aa13.93□□□□□ -0.18
CCDC57-210ENST00000577530 FCHSD2O94868 740 aa13.93□□□□□ -0.18
CCDC57-210ENST00000577530 STARD3NLO95772 234 aa13.93□□□□□ -0.18
CCDC57-210ENST00000577530 SRP68Q9UHB9 627 aaKnown RBP13.93□□□□□ -0.18
CCDC57-210ENST00000577530 CEMIPQ8WUJ3 1361 aa13.93□□□□□ -0.18
CCDC57-210ENST00000577530 N4BP2Q86UW6 1770 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms