RNA–Protein interactions for RNA: ENST00000577028.5

EDC4-213, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 4

Gene EDC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-213ENST00000577028 COL24A1Q17RW2 1714 aa23.42■■□□□ 1.34
EDC4-213ENST00000577028 ATP6V1AP38606 617 aa23.41■■□□□ 1.34
EDC4-213ENST00000577028 ZNF831Q5JPB2 1677 aa23.41■■□□□ 1.34
EDC4-213ENST00000577028 PHF14O94880 888 aa23.4■■□□□ 1.34
EDC4-213ENST00000577028 HMGB2P26583 209 aaKnown RBP23.4■■□□□ 1.34
EDC4-213ENST00000577028 MTHFSDQ2M296 383 aaKnown RBP23.4■■□□□ 1.34
EDC4-213ENST00000577028 NFATC2IPQ8NCF5 419 aa23.39■■□□□ 1.33
EDC4-213ENST00000577028 LINC00116Q8NCU8 138 aa23.39■■□□□ 1.33
EDC4-213ENST00000577028 NUDCQ9Y266 331 aa23.39■■□□□ 1.33
EDC4-213ENST00000577028 ADAMTS7Q9UKP4 1686 aa23.38■■□□□ 1.33
EDC4-213ENST00000577028 COL23A1Q86Y22 540 aaPredicted RBP23.38■■□□□ 1.33
EDC4-213ENST00000577028 KLHL34Q8N239 644 aa23.38■■□□□ 1.33
EDC4-213ENST00000577028 SLC16A10Q8TF71 515 aa23.38■■□□□ 1.33
EDC4-213ENST00000577028 TJP1Q07157 1748 aa23.38■■□□□ 1.33
EDC4-213ENST00000577028 POLD1P28340 1107 aa23.37■■□□□ 1.33
EDC4-213ENST00000577028 DDX10Q13206 875 aaKnown RBP23.37■■□□□ 1.33
EDC4-213ENST00000577028 ITPK1Q13572 414 aa23.37■■□□□ 1.33
EDC4-213ENST00000577028 MRC1P22897 1456 aa23.36■■□□□ 1.33
EDC4-213ENST00000577028 U2AF1L5P0DN76 240 aaPredicted RBP23.36■■□□□ 1.33
EDC4-213ENST00000577028 U2AF1Q01081 240 aaKnown RBP eCLIP23.36■■□□□ 1.33
EDC4-213ENST00000577028 MSL1Q68DK7 614 aa23.36■■□□□ 1.33
EDC4-213ENST00000577028 ARXQ96QS3 562 aa23.36■■□□□ 1.33
EDC4-213ENST00000577028 LGR6Q9HBX8 967 aa23.36■■□□□ 1.33
EDC4-213ENST00000577028 PTCD1O75127 700 aaKnown RBP23.35■■□□□ 1.33
EDC4-213ENST00000577028 PRKAR2BP31323 418 aa23.35■■□□□ 1.33
EDC4-213ENST00000577028 SGIP1Q9BQI5 828 aa23.35■■□□□ 1.33
EDC4-213ENST00000577028 GNPATO15228 680 aa23.34■■□□□ 1.33
EDC4-213ENST00000577028 RNMTO43148 476 aaKnown RBP23.34■■□□□ 1.33
EDC4-213ENST00000577028 SMIM5Q71RC9 77 aa23.34■■□□□ 1.33
EDC4-213ENST00000577028 FLAD1Q8NFF5 587 aa23.34■■□□□ 1.33
EDC4-213ENST00000577028 FHDC1Q9C0D6 1143 aaPredicted RBP23.34■■□□□ 1.33
EDC4-213ENST00000577028 MAP3K5Q99683 1374 aa23.34■■□□□ 1.33
EDC4-213ENST00000577028 SIPA1L3O60292 1781 aaPredicted RBP23.34■■□□□ 1.33
EDC4-213ENST00000577028 GAS2L2Q8NHY3 880 aa23.33■■□□□ 1.33
EDC4-213ENST00000577028 SLC52A2Q9HAB3 445 aa23.33■■□□□ 1.33
EDC4-213ENST00000577028 MYH14Q7Z406 1995 aaKnown RBP23.32■■□□□ 1.32
EDC4-213ENST00000577028 C4AP0C0L4 1744 aa23.31■■□□□ 1.32
EDC4-213ENST00000577028 CICQ96RK0 1608 aaPredicted RBP23.31■■□□□ 1.32
EDC4-213ENST00000577028 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.31■■□□□ 1.32
EDC4-213ENST00000577028 DCAF8L1A6NGE4 600 aa23.31■■□□□ 1.32
EDC4-213ENST00000577028 AMIGO3Q86WK7 504 aa23.31■■□□□ 1.32
EDC4-213ENST00000577028 SLC4A9Q96Q91 983 aa23.31■■□□□ 1.32
EDC4-213ENST00000577028 RSPH6AQ9H0K4 717 aa23.31■■□□□ 1.32
EDC4-213ENST00000577028 UBR2Q8IWV8 1755 aa23.31■■□□□ 1.32
EDC4-213ENST00000577028 DLG5Q8TDM6 1919 aa23.31■■□□□ 1.32
EDC4-213ENST00000577028 GNAT3A8MTJ3 354 aa23.29■■□□□ 1.32
EDC4-213ENST00000577028 SSFA2P28290 1259 aa23.28■■□□□ 1.32
EDC4-213ENST00000577028 ZEB1P37275 1124 aaPredicted RBP23.28■■□□□ 1.32
EDC4-213ENST00000577028 SLC39A6Q13433 755 aa23.28■■□□□ 1.32
EDC4-213ENST00000577028 PHACTR3Q96KR7 559 aa23.28■■□□□ 1.32
EDC4-213ENST00000577028 TEFQ10587 303 aa23.27■■□□□ 1.32
EDC4-213ENST00000577028 SYT17Q9BSW7 474 aa23.27■■□□□ 1.32
EDC4-213ENST00000577028 RTCBQ9Y3I0 505 aaKnown RBP23.26■■□□□ 1.31
EDC4-213ENST00000577028 KCPQ6ZWJ8 1503 aa23.26■■□□□ 1.31
EDC4-213ENST00000577028 CNTNAP4Q9C0A0 1308 aa23.25■■□□□ 1.31
EDC4-213ENST00000577028 RALBP1Q15311 655 aa23.24■■□□□ 1.31
EDC4-213ENST00000577028 FCHSD2O94868 740 aa23.23■■□□□ 1.31
EDC4-213ENST00000577028 NEFMP07197 916 aa23.23■■□□□ 1.31
EDC4-213ENST00000577028 TTC5Q8N0Z6 440 aa23.23■■□□□ 1.31
EDC4-213ENST00000577028 CRKLP46109 303 aaKnown RBP23.22■■□□□ 1.31
EDC4-213ENST00000577028 TRAPPC3LQ5T215 181 aa23.21■■□□□ 1.31
EDC4-213ENST00000577028 DNAJC10Q8IXB1 793 aa23.21■■□□□ 1.31
EDC4-213ENST00000577028 IL17REQ8NFR9 667 aa23.21■■□□□ 1.31
EDC4-213ENST00000577028 RTF1Q92541 710 aaKnown RBP23.21■■□□□ 1.31
EDC4-213ENST00000577028 RC3H1Q5TC82 1133 aaKnown RBP23.2■■□□□ 1.3
EDC4-213ENST00000577028 PELP1Q8IZL8 1130 aaKnown RBP23.19■■□□□ 1.3
EDC4-213ENST00000577028 MYBBP1AQ9BQG0 1328 aaKnown RBP23.18■■□□□ 1.3
EDC4-213ENST00000577028 RPS6KA4O75676 772 aa23.18■■□□□ 1.3
EDC4-213ENST00000577028 RFC4P35249 363 aa23.18■■□□□ 1.3
EDC4-213ENST00000577028 MCM10Q7L590 875 aa23.18■■□□□ 1.3
EDC4-213ENST00000577028 NLGN2Q8NFZ4 835 aa23.17■■□□□ 1.3
EDC4-213ENST00000577028 CHD4Q14839 1912 aa23.17■■□□□ 1.3
EDC4-213ENST00000577028 CEMIPQ8WUJ3 1361 aa23.16■■□□□ 1.3
EDC4-213ENST00000577028 MAPK8IP3Q9UPT6 1336 aa23.16■■□□□ 1.3
EDC4-213ENST00000577028 ADRA2BP18089 450 aa23.16■■□□□ 1.3
EDC4-213ENST00000577028 ARHGEF1Q92888 912 aaKnown RBP23.16■■□□□ 1.3
EDC4-213ENST00000577028 CCDC87Q9NVE4 849 aa23.16■■□□□ 1.3
EDC4-213ENST00000577028 DCTN1Q14203 1278 aa23.15■■□□□ 1.3
EDC4-213ENST00000577028 BTBD11A6QL63 1104 aa23.14■■□□□ 1.29
EDC4-213ENST00000577028 ZNF790Q6PG37 636 aa23.14■■□□□ 1.29
EDC4-213ENST00000577028 GPR162Q16538 588 aa23.13■■□□□ 1.29
EDC4-213ENST00000577028 MMP10P09238 476 aa23.12■■□□□ 1.29
EDC4-213ENST00000577028 CYP19A1P11511 503 aaPredicted RBP23.12■■□□□ 1.29
EDC4-213ENST00000577028 INTS5Q6P9B9 1019 aaKnown RBP23.12■■□□□ 1.29
EDC4-213ENST00000577028 ZNF496Q96IT1 587 aaPredicted RBP23.12■■□□□ 1.29
EDC4-213ENST00000577028 HEG1Q9ULI3 1381 aa23.12■■□□□ 1.29
EDC4-213ENST00000577028 VSIG10Q8N0Z9 540 aa23.11■■□□□ 1.29
EDC4-213ENST00000577028 PNNQ9H307 717 aaKnown RBP23.11■■□□□ 1.29
EDC4-213ENST00000577028 SRP68Q9UHB9 627 aaKnown RBP23.11■■□□□ 1.29
EDC4-213ENST00000577028 KIF13BQ9NQT8 1826 aa23.1■■□□□ 1.29
EDC4-213ENST00000577028 KDM3BQ7LBC6 1761 aa23.1■■□□□ 1.29
EDC4-213ENST00000577028 N4BP2Q86UW6 1770 aaPredicted RBP23.1■■□□□ 1.29
EDC4-213ENST00000577028 FMNL2Q96PY5 1086 aa23.1■■□□□ 1.29
EDC4-213ENST00000577028 ZBTB1Q9Y2K1 713 aa23.1■■□□□ 1.29
EDC4-213ENST00000577028 COL15A1P39059 1388 aa23.1■■□□□ 1.29
EDC4-213ENST00000577028 GYS1P13807 737 aa23.09■■□□□ 1.29
EDC4-213ENST00000577028 CANXP27824 592 aaKnown RBP23.09■■□□□ 1.29
EDC4-213ENST00000577028 NLGN1Q8N2Q7 840 aa23.09■■□□□ 1.29
EDC4-213ENST00000577028 ZNF330Q9Y3S2 320 aaPredicted RBP23.09■■□□□ 1.29
EDC4-213ENST00000577028 LAMB4A4D0S4 1761 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms