RNA–Protein interactions for RNA: ENST00000576532.1

CCNE1-206, Transcript of cyclin E1, humanhuman

TSL 5

Gene CCNE1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-206ENST00000576532 SLFN5Q08AF3 891 aa13.65□□□□□ -0.22
CCNE1-206ENST00000576532 SEPT12Q8IYM1 358 aa13.65□□□□□ -0.22
CCNE1-206ENST00000576532 CDCA7LQ96GN5 454 aa13.65□□□□□ -0.22
CCNE1-206ENST00000576532 RGS17Q9UGC6 210 aaPredicted RBP13.65□□□□□ -0.22
CCNE1-206ENST00000576532 SSUH2Q9Y2M2 353 aa13.65□□□□□ -0.22
CCNE1-206ENST00000576532 TAF7Q15545 349 aaPredicted RBP13.64□□□□□ -0.23
CCNE1-206ENST00000576532 MYH16Q9H6N6 1097 aa13.64□□□□□ -0.23
CCNE1-206ENST00000576532 LAS1LQ9Y4W2 734 aaKnown RBP13.64□□□□□ -0.23
CCNE1-206ENST00000576532 GNAI1P63096 354 aa13.63□□□□□ -0.23
CCNE1-206ENST00000576532 TEFQ10587 303 aa13.63□□□□□ -0.23
CCNE1-206ENST00000576532 TRMT2AQ8IZ69 625 aaKnown RBP13.63□□□□□ -0.23
CCNE1-206ENST00000576532 CFAP44Q96MT7 982 aa13.63□□□□□ -0.23
CCNE1-206ENST00000576532 IFT57Q9NWB7 429 aa13.63□□□□□ -0.23
CCNE1-206ENST00000576532 ERVV-2B6SEH9 535 aa13.62□□□□□ -0.23
CCNE1-206ENST00000576532 CHL1O00533 1208 aa13.62□□□□□ -0.23
CCNE1-206ENST00000576532 CENPBP07199 599 aaPredicted RBP13.62□□□□□ -0.23
CCNE1-206ENST00000576532 ZNF853P0CG23 659 aa13.62□□□□□ -0.23
CCNE1-206ENST00000576532 MARCH10Q8NA82 808 aaPredicted RBP13.62□□□□□ -0.23
CCNE1-206ENST00000576532 SPDYE1Q8NFV5 336 aaPredicted RBP13.62□□□□□ -0.23
CCNE1-206ENST00000576532 BABAM1Q9NWV8 329 aa13.62□□□□□ -0.23
CCNE1-206ENST00000576532 CABP4P57796 275 aa13.61□□□□□ -0.23
CCNE1-206ENST00000576532 POTEAQ6S8J7 498 aa13.61□□□□□ -0.23
CCNE1-206ENST00000576532 CLEC11AQ9Y240 323 aa13.61□□□□□ -0.23
CCNE1-206ENST00000576532 CEMIPQ8WUJ3 1361 aa13.6□□□□□ -0.23
CCNE1-206ENST00000576532 DUSP27Q5VZP5 1158 aa13.6□□□□□ -0.23
CCNE1-206ENST00000576532 NFATC2IPQ8NCF5 419 aa13.6□□□□□ -0.23
CCNE1-206ENST00000576532 SLC52A2Q9HAB3 445 aa13.6□□□□□ -0.23
CCNE1-206ENST00000576532 NWD2Q9ULI1 1742 aa13.59□□□□□ -0.23
CCNE1-206ENST00000576532 BTBD11A6QL63 1104 aa13.59□□□□□ -0.23
CCNE1-206ENST00000576532 MIS18AQ9NYP9 233 aa13.59□□□□□ -0.23
CCNE1-206ENST00000576532 TSPYL4Q9UJ04 414 aa13.59□□□□□ -0.23
CCNE1-206ENST00000576532 PLCH1Q4KWH8 1693 aa13.59□□□□□ -0.23
CCNE1-206ENST00000576532 KRT27Q7Z3Y8 459 aa13.58□□□□□ -0.24
CCNE1-206ENST00000576532 TSR2Q969E8 191 aaKnown RBP13.58□□□□□ -0.24
CCNE1-206ENST00000576532 MBIPQ9NS73 344 aa13.58□□□□□ -0.24
CCNE1-206ENST00000576532 FAM208AQ9UK61 1670 aaKnown RBP13.58□□□□□ -0.24
CCNE1-206ENST00000576532 TNS2Q63HR2 1409 aa13.57□□□□□ -0.24
CCNE1-206ENST00000576532 PRIM1P49642 420 aaKnown RBP13.57□□□□□ -0.24
CCNE1-206ENST00000576532 TMOD3Q9NYL9 352 aa13.57□□□□□ -0.24
CCNE1-206ENST00000576532 RGPD5Q99666 1765 aa13.57□□□□□ -0.24
CCNE1-206ENST00000576532 NRAPQ86VF7 1730 aa13.56□□□□□ -0.24
CCNE1-206ENST00000576532 FANCIQ9NVI1 1328 aa13.56□□□□□ -0.24
CCNE1-206ENST00000576532 KDM6AO15550 1401 aaPredicted RBP13.56□□□□□ -0.24
CCNE1-206ENST00000576532 EXOSC9Q06265 439 aaKnown RBP13.55□□□□□ -0.24
CCNE1-206ENST00000576532 PIGBQ92521 554 aa13.55□□□□□ -0.24
CCNE1-206ENST00000576532 SYTL4Q96C24 671 aaPredicted RBP13.55□□□□□ -0.24
CCNE1-206ENST00000576532 PRKAR2AP13861 404 aaKnown RBP13.54□□□□□ -0.24
CCNE1-206ENST00000576532 FAM182BQ5T319 152 aa13.54□□□□□ -0.24
CCNE1-206ENST00000576532 ZNF790Q6PG37 636 aa13.54□□□□□ -0.24
CCNE1-206ENST00000576532 FAM196AQ6ZSG2 479 aa13.54□□□□□ -0.24
CCNE1-206ENST00000576532 ACSBG1Q96GR2 724 aa13.54□□□□□ -0.24
CCNE1-206ENST00000576532 TTC5Q8N0Z6 440 aa13.53□□□□□ -0.24
CCNE1-206ENST00000576532 GLI3P10071 1580 aa13.53□□□□□ -0.24
CCNE1-206ENST00000576532 KCNQ3O43525 872 aa13.52□□□□□ -0.25
CCNE1-206ENST00000576532 CT47B1P0C2W7 299 aaPredicted RBP13.52□□□□□ -0.25
CCNE1-206ENST00000576532 EIF4A1P60842 406 aaKnown RBP13.52□□□□□ -0.25
CCNE1-206ENST00000576532 EVX2Q03828 476 aa13.52□□□□□ -0.25
CCNE1-206ENST00000576532 SLC39A6Q13433 755 aa13.52□□□□□ -0.25
CCNE1-206ENST00000576532 C8orf58Q8NAV2 365 aa13.52□□□□□ -0.25
CCNE1-206ENST00000576532 RGPD2P0DJD1 1756 aa13.51□□□□□ -0.25
CCNE1-206ENST00000576532 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.51□□□□□ -0.25
CCNE1-206ENST00000576532 ELL2O00472 640 aaPredicted RBP13.51□□□□□ -0.25
CCNE1-206ENST00000576532 KCNQ2O43526 872 aa13.51□□□□□ -0.25
CCNE1-206ENST00000576532 ATG3Q9NT62 314 aa13.51□□□□□ -0.25
CCNE1-206ENST00000576532 BCL9O00512 1426 aa13.5□□□□□ -0.25
CCNE1-206ENST00000576532 VAMP4O75379 141 aa13.5□□□□□ -0.25
CCNE1-206ENST00000576532 TWISTNBQ3B726 338 aaPredicted RBP13.5□□□□□ -0.25
CCNE1-206ENST00000576532 TSPYL6Q8N831 410 aa13.5□□□□□ -0.25
CCNE1-206ENST00000576532 FMNL2Q96PY5 1086 aa13.5□□□□□ -0.25
CCNE1-206ENST00000576532 CHMP4AQ9BY43 222 aa13.5□□□□□ -0.25
CCNE1-206ENST00000576532 ASAP1Q9ULH1 1129 aa13.5□□□□□ -0.25
CCNE1-206ENST00000576532 SOS1Q07889 1333 aaPredicted RBP13.49□□□□□ -0.25
CCNE1-206ENST00000576532 KRT24Q2M2I5 525 aa13.49□□□□□ -0.25
CCNE1-206ENST00000576532 SMARCC1Q92922 1105 aaPredicted RBP13.49□□□□□ -0.25
CCNE1-206ENST00000576532 ZNF428Q96B54 188 aa13.49□□□□□ -0.25
CCNE1-206ENST00000576532 ZNF496Q96IT1 587 aaPredicted RBP13.49□□□□□ -0.25
CCNE1-206ENST00000576532 BCL11BQ9C0K0 894 aaPredicted RBP13.49□□□□□ -0.25
CCNE1-206ENST00000576532 RCAN3Q9UKA8 241 aa13.49□□□□□ -0.25
CCNE1-206ENST00000576532 PTCD1O75127 700 aaKnown RBP13.48□□□□□ -0.25
CCNE1-206ENST00000576532 GIGYF1O75420 1035 aaPredicted RBP13.48□□□□□ -0.25
CCNE1-206ENST00000576532 SNRPA1P09661 255 aaKnown RBP13.48□□□□□ -0.25
CCNE1-206ENST00000576532 PARP4Q9UKK3 1724 aaKnown RBP13.47□□□□□ -0.25
CCNE1-206ENST00000576532 HOXB7P09629 217 aa13.47□□□□□ -0.25
CCNE1-206ENST00000576532 RARSP54136 660 aaKnown RBP13.46□□□□□ -0.25
CCNE1-206ENST00000576532 PTF1AQ7RTS3 328 aa13.46□□□□□ -0.25
CCNE1-206ENST00000576532 VSIG10Q8N0Z9 540 aa13.46□□□□□ -0.25
CCNE1-206ENST00000576532 TEX13AQ9BXU3 409 aaPredicted RBP13.46□□□□□ -0.25
CCNE1-206ENST00000576532 PKD1L3Q7Z443 1732 aa13.46□□□□□ -0.25
CCNE1-206ENST00000576532 HEG1Q9ULI3 1381 aa13.45□□□□□ -0.26
CCNE1-206ENST00000576532 THSD7AQ9UPZ6 1657 aa13.45□□□□□ -0.26
CCNE1-206ENST00000576532 MRC1P22897 1456 aa13.45□□□□□ -0.26
CCNE1-206ENST00000576532 TRIM37O94972 964 aa13.45□□□□□ -0.26
CCNE1-206ENST00000576532 ALDH1L2Q3SY69 923 aa13.45□□□□□ -0.26
CCNE1-206ENST00000576532 CCDC30Q5VVM6 783 aa13.45□□□□□ -0.26
CCNE1-206ENST00000576532 RGS12O14924 1447 aa13.45□□□□□ -0.26
CCNE1-206ENST00000576532 EIF2S2P20042 333 aaKnown RBP13.44□□□□□ -0.26
CCNE1-206ENST00000576532 HDGFL1Q5TGJ6 251 aa13.44□□□□□ -0.26
CCNE1-206ENST00000576532 SSH1Q8WYL5 1049 aa13.43□□□□□ -0.26
CCNE1-206ENST00000576532 STK31Q9BXU1 1019 aa13.43□□□□□ -0.26
CCNE1-206ENST00000576532 SUPT16HQ9Y5B9 1047 aaKnown RBP13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms