RNA–Protein interactions for RNA: ENST00000576112.2

TSR1-204, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 5 BASIC

Gene TSR1, Length 1,290 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-204ENST00000576112 ADCY9O60503 1353 aa20.29■□□□□ 0.84
TSR1-204ENST00000576112 IGSF1Q8N6C5 1336 aa20.28■□□□□ 0.84
TSR1-204ENST00000576112 GNPATO15228 680 aa20.28■□□□□ 0.84
TSR1-204ENST00000576112 IFNL2Q8IZJ0 200 aa20.28■□□□□ 0.84
TSR1-204ENST00000576112 ATG3Q9NT62 314 aa20.28■□□□□ 0.84
TSR1-204ENST00000576112 TIMELESSQ9UNS1 1208 aa20.28■□□□□ 0.84
TSR1-204ENST00000576112 KDM6AO15550 1401 aaPredicted RBP20.27■□□□□ 0.84
TSR1-204ENST00000576112 CICQ96RK0 1608 aaPredicted RBP20.27■□□□□ 0.84
TSR1-204ENST00000576112 MYH14Q7Z406 1995 aaKnown RBP20.27■□□□□ 0.84
TSR1-204ENST00000576112 ATP6V1AP38606 617 aa20.26■□□□□ 0.83
TSR1-204ENST00000576112 PLEKHG2Q9H7P9 1386 aa20.25■□□□□ 0.83
TSR1-204ENST00000576112 HMGB2P26583 209 aaKnown RBP20.25■□□□□ 0.83
TSR1-204ENST00000576112 SLC4A9Q96Q91 983 aa20.25■□□□□ 0.83
TSR1-204ENST00000576112 PCGF6Q9BYE7 350 aa20.25■□□□□ 0.83
TSR1-204ENST00000576112 TJP1Q07157 1748 aa20.24■□□□□ 0.83
TSR1-204ENST00000576112 HSPA5P11021 654 aaKnown RBP20.24■□□□□ 0.83
TSR1-204ENST00000576112 BRCA1P38398 1863 aaKnown RBP20.24■□□□□ 0.83
TSR1-204ENST00000576112 CLSPNQ9HAW4 1339 aa20.24■□□□□ 0.83
TSR1-204ENST00000576112 PXDNLA1KZ92 1463 aa20.24■□□□□ 0.83
TSR1-204ENST00000576112 VIRMAQ69YN4 1812 aaKnown RBP20.23■□□□□ 0.83
TSR1-204ENST00000576112 SCN11AQ9UI33 1791 aa20.22■□□□□ 0.83
TSR1-204ENST00000576112 PANK3Q9H999 370 aa20.22■□□□□ 0.83
TSR1-204ENST00000576112 AEBP1Q8IUX7 1158 aa20.21■□□□□ 0.83
TSR1-204ENST00000576112 MMP10P09238 476 aa20.2■□□□□ 0.82
TSR1-204ENST00000576112 ZNF526Q8TF50 670 aaPredicted RBP20.2■□□□□ 0.82
TSR1-204ENST00000576112 C10orf71Q711Q0 1435 aa20.19■□□□□ 0.82
TSR1-204ENST00000576112 EIF4G2P78344 907 aaKnown RBP eCLIP20.19■□□□□ 0.82
TSR1-204ENST00000576112 RBM42Q9BTD8 480 aaKnown RBP20.19■□□□□ 0.82
TSR1-204ENST00000576112 ADAMTS7Q9UKP4 1686 aa20.19■□□□□ 0.82
TSR1-204ENST00000576112 ERVV-2B6SEH9 535 aa20.18■□□□□ 0.82
TSR1-204ENST00000576112 ZNF530Q6P9A1 599 aaPredicted RBP20.18■□□□□ 0.82
TSR1-204ENST00000576112 DCAF5Q96JK2 942 aa20.18■□□□□ 0.82
TSR1-204ENST00000576112 GPBP1L1Q9HC44 474 aaPredicted RBP20.16■□□□□ 0.82
TSR1-204ENST00000576112 RTCBQ9Y3I0 505 aaKnown RBP20.16■□□□□ 0.82
TSR1-204ENST00000576112 CNTNAP4Q9C0A0 1308 aa20.16■□□□□ 0.82
TSR1-204ENST00000576112 PLEKHO1Q53GL0 409 aaPredicted RBP20.15■□□□□ 0.82
TSR1-204ENST00000576112 ARFGEF1Q9Y6D6 1849 aa20.14■□□□□ 0.81
TSR1-204ENST00000576112 HSP90AB1P08238 724 aaKnown RBP20.14■□□□□ 0.81
TSR1-204ENST00000576112 ARHGEF1Q92888 912 aaKnown RBP20.14■□□□□ 0.81
TSR1-204ENST00000576112 GYS1P13807 737 aa20.13■□□□□ 0.81
TSR1-204ENST00000576112 CABP4P57796 275 aa20.13■□□□□ 0.81
TSR1-204ENST00000576112 TRAPPC3LQ5T215 181 aa20.13■□□□□ 0.81
TSR1-204ENST00000576112 MORC1Q86VD1 984 aa20.13■□□□□ 0.81
TSR1-204ENST00000576112 RC3H1Q5TC82 1133 aaKnown RBP20.12■□□□□ 0.81
TSR1-204ENST00000576112 A0A0G2JLW4 131 aa20.11■□□□□ 0.81
TSR1-204ENST00000576112 PTCD1O75127 700 aaKnown RBP20.11■□□□□ 0.81
TSR1-204ENST00000576112 RPS6KA4O75676 772 aa20.11■□□□□ 0.81
TSR1-204ENST00000576112 AMOTQ4VCS5 1084 aa20.11■□□□□ 0.81
TSR1-204ENST00000576112 SULT6B1Q6IMI4 303 aa20.11■□□□□ 0.81
TSR1-204ENST00000576112 MRC1P22897 1456 aa20.11■□□□□ 0.81
TSR1-204ENST00000576112 ADRA2BP18089 450 aa20.1■□□□□ 0.81
TSR1-204ENST00000576112 IL13P35225 146 aa20.1■□□□□ 0.81
TSR1-204ENST00000576112 MTHFSP49914 203 aa20.1■□□□□ 0.81
TSR1-204ENST00000576112 C1orf141Q5JVX7 400 aa20.1■□□□□ 0.81
TSR1-204ENST00000576112 CRKLP46109 303 aaKnown RBP20.09■□□□□ 0.81
TSR1-204ENST00000576112 NLGN1Q8N2Q7 840 aa20.09■□□□□ 0.81
TSR1-204ENST00000576112 NFATC2IPQ8NCF5 419 aa20.09■□□□□ 0.81
TSR1-204ENST00000576112 SRP68Q9UHB9 627 aaKnown RBP20.09■□□□□ 0.81
TSR1-204ENST00000576112 RFC4P35249 363 aa20.08■□□□□ 0.81
TSR1-204ENST00000576112 BCS1LQ9Y276 419 aa20.08■□□□□ 0.81
TSR1-204ENST00000576112 KCPQ6ZWJ8 1503 aa20.07■□□□□ 0.8
TSR1-204ENST00000576112 AFDNP55196 1824 aaKnown RBP20.07■□□□□ 0.8
TSR1-204ENST00000576112 KIF3CO14782 793 aa20.07■□□□□ 0.8
TSR1-204ENST00000576112 DPEP1P16444 411 aa20.07■□□□□ 0.8
TSR1-204ENST00000576112 TGFB2P61812 414 aa20.07■□□□□ 0.8
TSR1-204ENST00000576112 UBR2Q8IWV8 1755 aa20.07■□□□□ 0.8
TSR1-204ENST00000576112 AMER1Q5JTC6 1135 aaPredicted RBP20.06■□□□□ 0.8
TSR1-204ENST00000576112 CCDC87Q9NVE4 849 aa20.06■□□□□ 0.8
TSR1-204ENST00000576112 USP42Q9H9J4 1324 aaKnown RBP20.05■□□□□ 0.8
TSR1-204ENST00000576112 HSPA6P17066 643 aa20.05■□□□□ 0.8
TSR1-204ENST00000576112 DDR1Q08345 913 aa20.05■□□□□ 0.8
TSR1-204ENST00000576112 FKBP8Q14318 412 aa20.05■□□□□ 0.8
TSR1-204ENST00000576112 KNSTRNQ9Y448 316 aa20.05■□□□□ 0.8
TSR1-204ENST00000576112 PARP3Q9Y6F1 533 aa20.05■□□□□ 0.8
TSR1-204ENST00000576112 KCNA3P22001 575 aa20.04■□□□□ 0.8
TSR1-204ENST00000576112 KIF7Q2M1P5 1343 aa20.03■□□□□ 0.8
TSR1-204ENST00000576112 NRXN2Q9P2S2 1712 aa20.03■□□□□ 0.8
TSR1-204ENST00000576112 INTS5Q6P9B9 1019 aaKnown RBP20.03■□□□□ 0.8
TSR1-204ENST00000576112 DLEC1Q9Y238 1755 aa20.03■□□□□ 0.8
TSR1-204ENST00000576112 SBF1O95248 1867 aa20.03■□□□□ 0.8
TSR1-204ENST00000576112 FCHSD2O94868 740 aa20.02■□□□□ 0.8
TSR1-204ENST00000576112 CCER1Q8TC90 406 aaPredicted RBP20.02■□□□□ 0.8
TSR1-204ENST00000576112 LGR6Q9HBX8 967 aa20.02■□□□□ 0.8
TSR1-204ENST00000576112 HMOX1P09601 288 aa20.01■□□□□ 0.79
TSR1-204ENST00000576112 AKAP4Q5JQC9 854 aa20.01■□□□□ 0.79
TSR1-204ENST00000576112 ARHGAP27Q6ZUM4 889 aa20.01■□□□□ 0.79
TSR1-204ENST00000576112 DNAJC10Q8IXB1 793 aa20.01■□□□□ 0.79
TSR1-204ENST00000576112 SIPA1L3O60292 1781 aaPredicted RBP20■□□□□ 0.79
TSR1-204ENST00000576112 COL3A1P02461 1466 aaPredicted RBP20■□□□□ 0.79
TSR1-204ENST00000576112 SLC52A2Q9HAB3 445 aa20■□□□□ 0.79
TSR1-204ENST00000576112 SLC39A6Q13433 755 aa19.99■□□□□ 0.79
TSR1-204ENST00000576112 SOS1Q07889 1333 aaPredicted RBP19.99■□□□□ 0.79
TSR1-204ENST00000576112 POLRMTO00411 1230 aaKnown RBP19.98■□□□□ 0.79
TSR1-204ENST00000576112 CHRNA5P30532 468 aa19.98■□□□□ 0.79
TSR1-204ENST00000576112 RNMTO43148 476 aaKnown RBP19.97■□□□□ 0.79
TSR1-204ENST00000576112 NMRK2Q9NPI5 230 aa19.97■□□□□ 0.79
TSR1-204ENST00000576112 SCN7AQ01118 1682 aa19.97■□□□□ 0.79
TSR1-204ENST00000576112 COL15A1P39059 1388 aa19.96■□□□□ 0.79
TSR1-204ENST00000576112 WDR90Q96KV7 1748 aa19.96■□□□□ 0.79
TSR1-204ENST00000576112 CYP19A1P11511 503 aaPredicted RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms