RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 YEATS2Q9ULM3 1422 aa17.52■□□□□ 0.4
SCARF1-209ENST00000576012 HMGN5P82970 282 aaKnown RBP17.52■□□□□ 0.4
SCARF1-209ENST00000576012 NUTM1Q86Y26 1132 aa17.52■□□□□ 0.4
SCARF1-209ENST00000576012 RPAP2Q8IXW5 612 aaPredicted RBP17.52■□□□□ 0.39
SCARF1-209ENST00000576012 ZNF428Q96B54 188 aa17.52■□□□□ 0.39
SCARF1-209ENST00000576012 CGNQ9P2M7 1197 aaKnown RBP17.52■□□□□ 0.39
SCARF1-209ENST00000576012 NSD2O96028 1365 aa17.51■□□□□ 0.39
SCARF1-209ENST00000576012 VPS37CA5D8V6 355 aaPredicted RBP17.51■□□□□ 0.39
SCARF1-209ENST00000576012 FAM173BQ6P4H8 233 aa17.51■□□□□ 0.39
SCARF1-209ENST00000576012 FERMT3Q86UX7 667 aa17.51■□□□□ 0.39
SCARF1-209ENST00000576012 PRIMPOLQ96LW4 560 aa17.5■□□□□ 0.39
SCARF1-209ENST00000576012 NPHP1O15259 732 aa17.5■□□□□ 0.39
SCARF1-209ENST00000576012 SULT6B1Q6IMI4 303 aa17.5■□□□□ 0.39
SCARF1-209ENST00000576012 MED14O60244 1454 aa17.5■□□□□ 0.39
SCARF1-209ENST00000576012 MYOM2P54296 1465 aa17.5■□□□□ 0.39
SCARF1-209ENST00000576012 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.5■□□□□ 0.39
SCARF1-209ENST00000576012 V9GYY5 206 aaPredicted RBP17.5■□□□□ 0.39
SCARF1-209ENST00000576012 PTGS1P23219 599 aa17.49■□□□□ 0.39
SCARF1-209ENST00000576012 LRMPQ12912 555 aa17.49■□□□□ 0.39
SCARF1-209ENST00000576012 CCDC183Q5T5S1 534 aa17.49■□□□□ 0.39
SCARF1-209ENST00000576012 FRMPD1Q5SYB0 1578 aa17.49■□□□□ 0.39
SCARF1-209ENST00000576012 KDM4AO75164 1064 aa17.49■□□□□ 0.39
SCARF1-209ENST00000576012 CHMP4AQ9BY43 222 aa17.49■□□□□ 0.39
SCARF1-209ENST00000576012 MROH1Q8NDA8 1641 aa17.49■□□□□ 0.39
SCARF1-209ENST00000576012 TET3O43151 1660 aa17.49■□□□□ 0.39
SCARF1-209ENST00000576012 ADGRB2O60241 1585 aa17.49■□□□□ 0.39
SCARF1-209ENST00000576012 DNM1Q05193 864 aaKnown RBP17.48■□□□□ 0.39
SCARF1-209ENST00000576012 CKAP2LQ8IYA6 745 aa17.48■□□□□ 0.39
SCARF1-209ENST00000576012 KCNF1Q9H3M0 494 aa17.48■□□□□ 0.39
SCARF1-209ENST00000576012 RICTORQ6R327 1708 aa17.48■□□□□ 0.39
SCARF1-209ENST00000576012 HMMRO75330 724 aa17.48■□□□□ 0.39
SCARF1-209ENST00000576012 BBXQ8WY36 941 aaPredicted RBP17.48■□□□□ 0.39
SCARF1-209ENST00000576012 WDR33Q9C0J8 1336 aaKnown RBP17.48■□□□□ 0.39
SCARF1-209ENST00000576012 PTCH1Q13635 1447 aa17.48■□□□□ 0.39
SCARF1-209ENST00000576012 TULP4Q9NRJ4 1543 aa17.48■□□□□ 0.39
SCARF1-209ENST00000576012 PNMA6EA0A0J9YXQ4 647 aa17.48■□□□□ 0.39
SCARF1-209ENST00000576012 RTL1A6NKG5 1358 aa17.48■□□□□ 0.39
SCARF1-209ENST00000576012 MX1P20591 662 aa17.47■□□□□ 0.39
SCARF1-209ENST00000576012 BRPF1P55201 1214 aaPredicted RBP17.47■□□□□ 0.39
SCARF1-209ENST00000576012 NPATQ14207 1427 aa17.47■□□□□ 0.39
SCARF1-209ENST00000576012 QRICH2Q9H0J4 1663 aa17.47■□□□□ 0.39
SCARF1-209ENST00000576012 SPG7Q9UQ90 795 aa17.47■□□□□ 0.39
SCARF1-209ENST00000576012 VGLL3A8MV65 326 aa17.47■□□□□ 0.39
SCARF1-209ENST00000576012 ZNF853P0CG23 659 aa17.47■□□□□ 0.39
SCARF1-209ENST00000576012 CHMLP26374 656 aa17.47■□□□□ 0.39
SCARF1-209ENST00000576012 FKBP5Q13451 457 aaPredicted RBP17.47■□□□□ 0.39
SCARF1-209ENST00000576012 CCDC83Q8IWF9 413 aa17.46■□□□□ 0.39
SCARF1-209ENST00000576012 NRBP1Q9UHY1 535 aa17.46■□□□□ 0.39
SCARF1-209ENST00000576012 DIP2CQ9Y2E4 1556 aa17.46■□□□□ 0.39
SCARF1-209ENST00000576012 FOXO3O43524 673 aa17.46■□□□□ 0.39
SCARF1-209ENST00000576012 LUZP1Q86V48 1076 aa17.46■□□□□ 0.39
SCARF1-209ENST00000576012 VWDEQ8N2E2 1590 aa17.45■□□□□ 0.38
SCARF1-209ENST00000576012 SYT1P21579 422 aa17.45■□□□□ 0.38
SCARF1-209ENST00000576012 SMC3Q9UQE7 1217 aa17.45■□□□□ 0.38
SCARF1-209ENST00000576012 LRRC7Q96NW7 1537 aa17.45■□□□□ 0.38
SCARF1-209ENST00000576012 IL13P35225 146 aa17.45■□□□□ 0.38
SCARF1-209ENST00000576012 LRRCC1Q9C099 1032 aa17.45■□□□□ 0.38
SCARF1-209ENST00000576012 CUL4AQ13619 759 aa17.45■□□□□ 0.38
SCARF1-209ENST00000576012 COL3A1P02461 1466 aaPredicted RBP17.44■□□□□ 0.38
SCARF1-209ENST00000576012 CWC27Q6UX04 472 aaKnown RBP17.44■□□□□ 0.38
SCARF1-209ENST00000576012 NECAB1Q8N987 351 aa17.44■□□□□ 0.38
SCARF1-209ENST00000576012 MROH2AA6NES4 1674 aa17.44■□□□□ 0.38
SCARF1-209ENST00000576012 PIK3R4Q99570 1358 aa17.44■□□□□ 0.38
SCARF1-209ENST00000576012 ATP10DQ9P241 1426 aa17.43■□□□□ 0.38
SCARF1-209ENST00000576012 STX6O43752 255 aa17.43■□□□□ 0.38
SCARF1-209ENST00000576012 CCDC186Q7Z3E2 898 aa17.43■□□□□ 0.38
SCARF1-209ENST00000576012 FAM184AQ8NB25 1140 aa17.43■□□□□ 0.38
SCARF1-209ENST00000576012 FBXW7Q969H0 707 aa17.43■□□□□ 0.38
SCARF1-209ENST00000576012 LARGE1O95461 756 aa17.43■□□□□ 0.38
SCARF1-209ENST00000576012 MCM2P49736 904 aa17.43■□□□□ 0.38
SCARF1-209ENST00000576012 AK2P54819 239 aa17.43■□□□□ 0.38
SCARF1-209ENST00000576012 KIAA1524Q8TCG1 905 aa17.43■□□□□ 0.38
SCARF1-209ENST00000576012 DIAPH3Q9NSV4 1193 aa17.43■□□□□ 0.38
SCARF1-209ENST00000576012 EFCAB6Q5THR3 1501 aa17.43■□□□□ 0.38
SCARF1-209ENST00000576012 ZSCAN22P10073 491 aaPredicted RBP17.43■□□□□ 0.38
SCARF1-209ENST00000576012 TCEANC2Q96MN5 208 aa17.43■□□□□ 0.38
SCARF1-209ENST00000576012 TRERF1Q96PN7 1200 aa17.43■□□□□ 0.38
SCARF1-209ENST00000576012 PPRC1Q5VV67 1664 aaKnown RBP17.43■□□□□ 0.38
SCARF1-209ENST00000576012 UTP14CQ5TAP6 766 aaKnown RBP17.42■□□□□ 0.38
SCARF1-209ENST00000576012 RASEFQ8IZ41 740 aa17.42■□□□□ 0.38
SCARF1-209ENST00000576012 ERICH4A6NGS2 130 aa17.42■□□□□ 0.38
SCARF1-209ENST00000576012 TFIP11Q9UBB9 837 aaKnown RBP17.42■□□□□ 0.38
SCARF1-209ENST00000576012 FAM135BQ49AJ0 1406 aa17.42■□□□□ 0.38
SCARF1-209ENST00000576012 HAP1P54257 671 aaPredicted RBP17.41■□□□□ 0.38
SCARF1-209ENST00000576012 LMOD3Q0VAK6 560 aa17.41■□□□□ 0.38
SCARF1-209ENST00000576012 GNAI2P04899 355 aa17.41■□□□□ 0.38
SCARF1-209ENST00000576012 UBE2HP62256 183 aa17.41■□□□□ 0.38
SCARF1-209ENST00000576012 CASTP20810 708 aaKnown RBP17.4■□□□□ 0.38
SCARF1-209ENST00000576012 TRIM5Q9C035 493 aa17.4■□□□□ 0.38
SCARF1-209ENST00000576012 LRRFIP2Q9Y608 721 aaKnown RBP17.4■□□□□ 0.38
SCARF1-209ENST00000576012 TRHP20396 242 aaPredicted RBP17.4■□□□□ 0.38
SCARF1-209ENST00000576012 UVSSAQ2YD98 709 aa17.4■□□□□ 0.38
SCARF1-209ENST00000576012 TSPYL4Q9UJ04 414 aa17.4■□□□□ 0.38
SCARF1-209ENST00000576012 ADGRB1O14514 1584 aa17.4■□□□□ 0.38
SCARF1-209ENST00000576012 RIMS2Q9UQ26 1411 aa17.4■□□□□ 0.38
SCARF1-209ENST00000576012 COG3Q96JB2 828 aa17.39■□□□□ 0.38
SCARF1-209ENST00000576012 GTPBP4Q9BZE4 634 aaKnown RBP17.39■□□□□ 0.38
SCARF1-209ENST00000576012 KIF13AQ9H1H9 1805 aa17.39■□□□□ 0.37
SCARF1-209ENST00000576012 GJB2P29033 226 aa17.39■□□□□ 0.37
SCARF1-209ENST00000576012 SYTL4Q96C24 671 aaPredicted RBP17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms