RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, human

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1L1-222	ENST00000575909	MARS	P56192	900 aa	Known RBP	10.58	□□□□□ -0.72
TOM1L1-222	ENST00000575909	ZNF211	Q13398	564 aa	Predicted RBP	10.58	□□□□□ -0.72
TOM1L1-222	ENST00000575909	SF3B2	Q13435	895 aa	Known RBP	10.58	□□□□□ -0.72
TOM1L1-222	ENST00000575909	SPRYD7	Q5W111	196 aa		10.58	□□□□□ -0.72
TOM1L1-222	ENST00000575909	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	10.58	□□□□□ -0.72
TOM1L1-222	ENST00000575909	SCG3	Q8WXD2	468 aa	Known RBP	10.58	□□□□□ -0.72
TOM1L1-222	ENST00000575909	SERTAD1	Q9UHV2	236 aa		10.58	□□□□□ -0.72
TOM1L1-222	ENST00000575909	ATAD2	Q6PL18	1390 aa		10.57	□□□□□ -0.72
TOM1L1-222	ENST00000575909		H3BRB1	525 aa		10.57	□□□□□ -0.72
TOM1L1-222	ENST00000575909	C21orf2	O43822	256 aa		10.57	□□□□□ -0.72
TOM1L1-222	ENST00000575909	ADD1	P35611	737 aa	Known RBP	10.57	□□□□□ -0.72
TOM1L1-222	ENST00000575909	FKBP4	Q02790	459 aa	Known RBP eCLIP	10.57	□□□□□ -0.72
TOM1L1-222	ENST00000575909	GLYCTK	Q8IVS8	523 aa		10.57	□□□□□ -0.72
TOM1L1-222	ENST00000575909	ZNF428	Q96B54	188 aa		10.57	□□□□□ -0.72
TOM1L1-222	ENST00000575909	PURB	Q96QR8	312 aa	Known RBP	10.57	□□□□□ -0.72
TOM1L1-222	ENST00000575909	TUT1	Q9H6E5	874 aa	Known RBP	10.57	□□□□□ -0.72
TOM1L1-222	ENST00000575909	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	10.56	□□□□□ -0.72	5e-13	■■■■■ 176.9
TOM1L1-222	ENST00000575909	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	10.56	□□□□□ -0.72
TOM1L1-222	ENST00000575909	ALDH1A1	P00352	501 aa		10.55	□□□□□ -0.72
TOM1L1-222	ENST00000575909	FOXK2	Q01167	660 aa		10.55	□□□□□ -0.72
TOM1L1-222	ENST00000575909	CAPN12	Q6ZSI9	719 aa		10.55	□□□□□ -0.72
TOM1L1-222	ENST00000575909	ZNF598	Q86UK7	904 aa	Known RBP	10.55	□□□□□ -0.72
TOM1L1-222	ENST00000575909	VTI1A	Q96AJ9	217 aa		10.55	□□□□□ -0.72
TOM1L1-222	ENST00000575909	TSPAN10	Q9H1Z9	355 aa	Predicted RBP	10.55	□□□□□ -0.72
TOM1L1-222	ENST00000575909	ANO2	Q9NQ90	1003 aa		10.55	□□□□□ -0.72
TOM1L1-222	ENST00000575909	SCHIP1	Q9P0W5	487 aa	Predicted RBP	10.55	□□□□□ -0.72
TOM1L1-222	ENST00000575909		A6NJY4	79 aa		10.54	□□□□□ -0.72
TOM1L1-222	ENST00000575909		E9PSI1	815 aa		10.54	□□□□□ -0.72
TOM1L1-222	ENST00000575909	SMTN	P53814	917 aa		10.54	□□□□□ -0.72
TOM1L1-222	ENST00000575909	NNT	Q13423	1086 aa		10.54	□□□□□ -0.72
TOM1L1-222	ENST00000575909	MTFR1	Q15390	333 aa		10.54	□□□□□ -0.72
TOM1L1-222	ENST00000575909	ZNF697	Q5TEC3	545 aa		10.54	□□□□□ -0.72
TOM1L1-222	ENST00000575909	STAG2	Q8N3U4	1231 aa		10.54	□□□□□ -0.72
TOM1L1-222	ENST00000575909	XAGE2	Q96GT9	111 aa		10.54	□□□□□ -0.72
TOM1L1-222	ENST00000575909	WASF2	Q9Y6W5	498 aa		10.54	□□□□□ -0.72
TOM1L1-222	ENST00000575909	HELQ	Q8TDG4	1101 aa		10.53	□□□□□ -0.72
TOM1L1-222	ENST00000575909	ARHGEF10L	Q9HCE6	1279 aa		10.53	□□□□□ -0.72
TOM1L1-222	ENST00000575909	RBM47	A0AV96	593 aa	Known RBP	10.52	□□□□□ -0.73
TOM1L1-222	ENST00000575909	PPP1R12B	O60237	982 aa	Predicted RBP	10.52	□□□□□ -0.73
TOM1L1-222	ENST00000575909	ADH1A	P07327	375 aa		10.52	□□□□□ -0.73
TOM1L1-222	ENST00000575909	NAA30	Q147X3	362 aa	Predicted RBP	10.52	□□□□□ -0.73
TOM1L1-222	ENST00000575909	CHMP7	Q8WUX9	453 aa	Predicted RBP	10.52	□□□□□ -0.73
TOM1L1-222	ENST00000575909	RAB6B	Q9NRW1	208 aa		10.52	□□□□□ -0.73
TOM1L1-222	ENST00000575909	SNIP1	Q8TAD8	396 aa	Known RBP	10.51	□□□□□ -0.73
TOM1L1-222	ENST00000575909	ESYT1	Q9BSJ8	1104 aa		10.51	□□□□□ -0.73
TOM1L1-222	ENST00000575909		A0A1W2PRU2	124 aa		10.5	□□□□□ -0.73
TOM1L1-222	ENST00000575909	CDK2AP1	O14519	115 aa		10.5	□□□□□ -0.73
TOM1L1-222	ENST00000575909	IL2RA	P01589	272 aa		10.5	□□□□□ -0.73
TOM1L1-222	ENST00000575909	PSMA6	P60900	246 aa	Known RBP	10.5	□□□□□ -0.73
TOM1L1-222	ENST00000575909	FOXC1	Q12948	553 aa		10.5	□□□□□ -0.73
TOM1L1-222	ENST00000575909	ECM1	Q16610	540 aa		10.5	□□□□□ -0.73
TOM1L1-222	ENST00000575909	SLC9A9	Q8IVB4	645 aa		10.5	□□□□□ -0.73
TOM1L1-222	ENST00000575909	CNKSR1	Q969H4	720 aa		10.5	□□□□□ -0.73
TOM1L1-222	ENST00000575909	PKD2L1	Q9P0L9	805 aa		10.5	□□□□□ -0.73
TOM1L1-222	ENST00000575909	CHMP3	Q9Y3E7	222 aa		10.5	□□□□□ -0.73
TOM1L1-222	ENST00000575909	FAM13A	O94988	1023 aa		10.49	□□□□□ -0.73
TOM1L1-222	ENST00000575909	NPR3	P17342	541 aa		10.49	□□□□□ -0.73
TOM1L1-222	ENST00000575909	ARHGAP4	P98171	946 aa		10.49	□□□□□ -0.73
TOM1L1-222	ENST00000575909	MMRN1	Q13201	1228 aa		10.49	□□□□□ -0.73
TOM1L1-222	ENST00000575909	CLN3	Q13286	438 aa		10.49	□□□□□ -0.73
TOM1L1-222	ENST00000575909	MTMR3	Q13615	1198 aa		10.49	□□□□□ -0.73
TOM1L1-222	ENST00000575909	NOM1	Q5C9Z4	860 aa	Known RBP	10.49	□□□□□ -0.73
TOM1L1-222	ENST00000575909		Q6ZVU0	165 aa		10.49	□□□□□ -0.73
TOM1L1-222	ENST00000575909	C2orf49	Q9BVC5	232 aa	Predicted RBP	10.49	□□□□□ -0.73
TOM1L1-222	ENST00000575909	DCTN4	Q9UJW0	460 aa		10.49	□□□□□ -0.73
TOM1L1-222	ENST00000575909		V9GY48	417 aa	Predicted RBP	10.49	□□□□□ -0.73
TOM1L1-222	ENST00000575909	ANKRD33B	A6NCL7	494 aa		10.48	□□□□□ -0.73
TOM1L1-222	ENST00000575909	TLR1	Q15399	786 aa		10.48	□□□□□ -0.73
TOM1L1-222	ENST00000575909	C16orf46	Q6P387	395 aa		10.48	□□□□□ -0.73
TOM1L1-222	ENST00000575909	NBPF15	Q8N660	670 aa		10.48	□□□□□ -0.73
TOM1L1-222	ENST00000575909	HRH3	Q9Y5N1	445 aa		10.48	□□□□□ -0.73
TOM1L1-222	ENST00000575909	MAPK1	P28482	360 aa		10.47	□□□□□ -0.73
TOM1L1-222	ENST00000575909	TBCEL	Q5QJ74	424 aa		10.47	□□□□□ -0.73
TOM1L1-222	ENST00000575909	KDF1	Q8NAX2	398 aa	Predicted RBP	10.47	□□□□□ -0.73
TOM1L1-222	ENST00000575909	KLF16	Q9BXK1	252 aa	Predicted RBP	10.47	□□□□□ -0.73
TOM1L1-222	ENST00000575909		A0A0G2JS52	829 aa		10.46	□□□□□ -0.73
TOM1L1-222	ENST00000575909	PTGIR	P43119	386 aa		10.46	□□□□□ -0.73
TOM1L1-222	ENST00000575909	CBLB	Q13191	982 aa		10.46	□□□□□ -0.73
TOM1L1-222	ENST00000575909	POTEA	Q6S8J7	498 aa		10.46	□□□□□ -0.73
TOM1L1-222	ENST00000575909	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	10.46	□□□□□ -0.73
TOM1L1-222	ENST00000575909	ITPKC	Q96DU7	683 aa		10.46	□□□□□ -0.73
TOM1L1-222	ENST00000575909	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	10.46	□□□□□ -0.73
TOM1L1-222	ENST00000575909	ZIC2	O95409	532 aa	Predicted RBP	10.45	□□□□□ -0.74
TOM1L1-222	ENST00000575909	NPAS4	Q8IUM7	802 aa		10.45	□□□□□ -0.74
TOM1L1-222	ENST00000575909	ASB16	Q96NS5	453 aa		10.45	□□□□□ -0.74
TOM1L1-222	ENST00000575909	BCL2L13	Q9BXK5	485 aa		10.45	□□□□□ -0.74
TOM1L1-222	ENST00000575909	TTC24	A2A3L6	582 aa	Predicted RBP	10.44	□□□□□ -0.74
TOM1L1-222	ENST00000575909	CENPC	Q03188	943 aa		10.44	□□□□□ -0.74
TOM1L1-222	ENST00000575909	TEAD4	Q15561	434 aa		10.44	□□□□□ -0.74
TOM1L1-222	ENST00000575909	NLRP3	Q96P20	1036 aa		10.44	□□□□□ -0.74
TOM1L1-222	ENST00000575909	PRKD2	Q9BZL6	878 aa		10.44	□□□□□ -0.74
TOM1L1-222	ENST00000575909	SAP130	Q9H0E3	1048 aa		10.44	□□□□□ -0.74
TOM1L1-222	ENST00000575909	SERTM1	A2A2V5	107 aa		10.43	□□□□□ -0.74
TOM1L1-222	ENST00000575909	HIRA	P54198	1017 aa	Predicted RBP	10.43	□□□□□ -0.74
TOM1L1-222	ENST00000575909	WDR4	P57081	412 aa	Known RBP	10.43	□□□□□ -0.74
TOM1L1-222	ENST00000575909	COX20	Q5RI15	118 aa		10.43	□□□□□ -0.74
TOM1L1-222	ENST00000575909	CYP4X1	Q8N118	509 aa		10.43	□□□□□ -0.74
TOM1L1-222	ENST00000575909	FHDC1	Q9C0D6	1143 aa	Predicted RBP	10.43	□□□□□ -0.74
TOM1L1-222	ENST00000575909	PLA2G2E	Q9NZK7	142 aa		10.43	□□□□□ -0.74
TOM1L1-222	ENST00000575909		J3QL48	77 aa		10.42	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms