RNA–Protein interactions for RNA: ENST00000575320.1

TFAP4-206, Transcript of transcription factor AP-4, humanhuman

TSL 2

Gene TFAP4, Length 6,491 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP4-206ENST00000575320 CRACR2BQ8N4Y2 399 aaPredicted RBP16.32■□□□□ 0.2
TFAP4-206ENST00000575320 CRACR2AQ9BSW2 395 aa16.32■□□□□ 0.2
TFAP4-206ENST00000575320 RFC4P35249 363 aa16.31■□□□□ 0.2
TFAP4-206ENST00000575320 GBP3Q9H0R5 595 aa16.31■□□□□ 0.2
TFAP4-206ENST00000575320 SCLT1Q96NL6 688 aa16.31■□□□□ 0.2
TFAP4-206ENST00000575320 TRIM21P19474 475 aaKnown RBP16.31■□□□□ 0.2
TFAP4-206ENST00000575320 JAKMIP3Q5VZ66 844 aa16.31■□□□□ 0.2
TFAP4-206ENST00000575320 BTBD11A6QL63 1104 aa16.31■□□□□ 0.2
TFAP4-206ENST00000575320 CFAP70Q5T0N1 1121 aa16.31■□□□□ 0.2
TFAP4-206ENST00000575320 CASTP20810 708 aaKnown RBP16.3■□□□□ 0.2
TFAP4-206ENST00000575320 FKBP4Q02790 459 aaKnown RBP eCLIP16.3■□□□□ 0.2
TFAP4-206ENST00000575320 CABP1Q9NZU7 370 aa16.3■□□□□ 0.2
TFAP4-206ENST00000575320 SSBP05455 408 aaKnown RBP eCLIP16.3■□□□□ 0.2
TFAP4-206ENST00000575320 ZSCAN25Q6NSZ9 544 aa16.3■□□□□ 0.2
TFAP4-206ENST00000575320 DYDC1Q8WWB3 177 aa16.3■□□□□ 0.2
TFAP4-206ENST00000575320 TEX14Q8IWB6 1497 aa16.3■□□□□ 0.2
TFAP4-206ENST00000575320 KIF2AO00139 706 aaPredicted RBP16.3■□□□□ 0.2
TFAP4-206ENST00000575320 RAI14Q9P0K7 980 aa16.3■□□□□ 0.2
TFAP4-206ENST00000575320 MPRIPQ6WCQ1 1025 aa16.29■□□□□ 0.2
TFAP4-206ENST00000575320 DDX11Q96FC9 970 aa16.29■□□□□ 0.2
TFAP4-206ENST00000575320 ZNF397Q8NF99 534 aaPredicted RBP16.29■□□□□ 0.2
TFAP4-206ENST00000575320 BMP2KQ9NSY1 1161 aaPredicted RBP16.29■□□□□ 0.2
TFAP4-206ENST00000575320 MYO1BO43795 1136 aa16.28■□□□□ 0.2
TFAP4-206ENST00000575320 MAP2K1Q02750 393 aaPredicted RBP16.28■□□□□ 0.2
TFAP4-206ENST00000575320 KRT32Q14532 448 aa16.28■□□□□ 0.2
TFAP4-206ENST00000575320 ZSCAN12O43309 604 aa16.28■□□□□ 0.2
TFAP4-206ENST00000575320 SULT6B1Q6IMI4 303 aa16.28■□□□□ 0.2
TFAP4-206ENST00000575320 MATR3P43243 847 aaKnown RBP eCLIP16.28■□□□□ 0.2
TFAP4-206ENST00000575320 SFPQP23246 707 aaKnown RBP eCLIP16.28■□□□□ 0.2
TFAP4-206ENST00000575320 NF2P35240 595 aa16.28■□□□□ 0.2
TFAP4-206ENST00000575320 CCDC183Q5T5S1 534 aa16.28■□□□□ 0.2
TFAP4-206ENST00000575320 CGNQ9P2M7 1197 aaKnown RBP16.28■□□□□ 0.2
TFAP4-206ENST00000575320 KRT28Q7Z3Y7 464 aa16.27■□□□□ 0.2
TFAP4-206ENST00000575320 IL1RAPL2Q9NP60 686 aa16.27■□□□□ 0.2
TFAP4-206ENST00000575320 A0A087WZG4 1122 aa16.27■□□□□ 0.2
TFAP4-206ENST00000575320 SRGAP3O43295 1099 aa16.27■□□□□ 0.2
TFAP4-206ENST00000575320 KIF18AQ8NI77 898 aa16.27■□□□□ 0.2
TFAP4-206ENST00000575320 ERBINQ96RT1 1412 aa16.27■□□□□ 0.2
TFAP4-206ENST00000575320 DNAI2Q9GZS0 605 aa16.27■□□□□ 0.2
TFAP4-206ENST00000575320 DNAJC5BQ9UF47 199 aa16.27■□□□□ 0.2
TFAP4-206ENST00000575320 PHF8Q9UPP1 1060 aa16.27■□□□□ 0.2
TFAP4-206ENST00000575320 LRRC9Q6ZRR7 1453 aa16.27■□□□□ 0.19
TFAP4-206ENST00000575320 CTNNA3Q9UI47 895 aa16.27■□□□□ 0.19
TFAP4-206ENST00000575320 URI1O94763 535 aaPredicted RBP16.27■□□□□ 0.19
TFAP4-206ENST00000575320 ZNF76P36508 570 aa16.26■□□□□ 0.19
TFAP4-206ENST00000575320 CCDC83Q8IWF9 413 aa16.26■□□□□ 0.19
TFAP4-206ENST00000575320 MAP9Q49MG5 647 aa16.26■□□□□ 0.19
TFAP4-206ENST00000575320 WASF1Q92558 559 aa16.26■□□□□ 0.19
TFAP4-206ENST00000575320 UBAC1Q9BSL1 405 aa16.26■□□□□ 0.19
TFAP4-206ENST00000575320 KIF5CO60282 957 aa16.26■□□□□ 0.19
TFAP4-206ENST00000575320 CAVIN4Q5BKX8 364 aa16.26■□□□□ 0.19
TFAP4-206ENST00000575320 CEP131Q9UPN4 1083 aa16.26■□□□□ 0.19
TFAP4-206ENST00000575320 POLR3GO15318 223 aaPredicted RBP16.26■□□□□ 0.19
TFAP4-206ENST00000575320 TDO2P48775 406 aa16.26■□□□□ 0.19
TFAP4-206ENST00000575320 SPA17Q15506 151 aa16.26■□□□□ 0.19
TFAP4-206ENST00000575320 PIBF1Q8WXW3 757 aa16.26■□□□□ 0.19
TFAP4-206ENST00000575320 CCDC113Q9H0I3 377 aa16.26■□□□□ 0.19
TFAP4-206ENST00000575320 GOLGA6L10A0A0M3HER8 536 aa16.25■□□□□ 0.19
TFAP4-206ENST00000575320 SSR1P43307 286 aaKnown RBP16.25■□□□□ 0.19
TFAP4-206ENST00000575320 PDIA4P13667 645 aaKnown RBP16.25■□□□□ 0.19
TFAP4-206ENST00000575320 AMOTL2Q9Y2J4 779 aa16.25■□□□□ 0.19
TFAP4-206ENST00000575320 NUTM1Q86Y26 1132 aa16.25■□□□□ 0.19
TFAP4-206ENST00000575320 CLIP2Q9UDT6 1046 aa16.25■□□□□ 0.19
TFAP4-206ENST00000575320 PRKCSHP14314 528 aaPredicted RBP16.25■□□□□ 0.19
TFAP4-206ENST00000575320 LMOD1P29536 600 aaPredicted RBP16.25■□□□□ 0.19
TFAP4-206ENST00000575320 NBPF1Q3BBV0 1214 aa16.25■□□□□ 0.19
TFAP4-206ENST00000575320 FERMT3Q86UX7 667 aa16.25■□□□□ 0.19
TFAP4-206ENST00000575320 ANO10Q9NW15 660 aa16.25■□□□□ 0.19
TFAP4-206ENST00000575320 SLF2Q8IX21 1173 aa16.25■□□□□ 0.19
TFAP4-206ENST00000575320 TOPBP1Q92547 1522 aa16.24■□□□□ 0.19
TFAP4-206ENST00000575320 CCDC91Q7Z6B0 441 aa16.24■□□□□ 0.19
TFAP4-206ENST00000575320 C9orf84Q5VXU9 1444 aa16.24■□□□□ 0.19
TFAP4-206ENST00000575320 TNIP1Q15025 636 aa16.24■□□□□ 0.19
TFAP4-206ENST00000575320 KIF4BQ2VIQ3 1234 aa16.24■□□□□ 0.19
TFAP4-206ENST00000575320 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.24■□□□□ 0.19
TFAP4-206ENST00000575320 CALCOCO1Q9P1Z2 691 aa16.24■□□□□ 0.19
TFAP4-206ENST00000575320 PTCD1O75127 700 aaKnown RBP16.23■□□□□ 0.19
TFAP4-206ENST00000575320 IMMTQ16891 758 aaKnown RBP16.23■□□□□ 0.19
TFAP4-206ENST00000575320 TMEM57Q8N5G2 664 aa16.23■□□□□ 0.19
TFAP4-206ENST00000575320 MCM3P25205 808 aa16.23■□□□□ 0.19
TFAP4-206ENST00000575320 TICAM2Q86XR7 235 aa16.23■□□□□ 0.19
TFAP4-206ENST00000575320 SLC12A5Q9H2X9 1139 aa16.23■□□□□ 0.19
TFAP4-206ENST00000575320 TMX1Q9H3N1 280 aa16.23■□□□□ 0.19
TFAP4-206ENST00000575320 STK32BQ9NY57 414 aa16.23■□□□□ 0.19
TFAP4-206ENST00000575320 ADGRL1O94910 1474 aa16.23■□□□□ 0.19
TFAP4-206ENST00000575320 C6orf229H3BNL8 230 aa16.23■□□□□ 0.19
TFAP4-206ENST00000575320 FOXO3O43524 673 aa16.23■□□□□ 0.19
TFAP4-206ENST00000575320 TNNT1P13805 278 aa16.23■□□□□ 0.19
TFAP4-206ENST00000575320 TRERF1Q96PN7 1200 aa16.23■□□□□ 0.19
TFAP4-206ENST00000575320 KIF21BO75037 1637 aa16.23■□□□□ 0.19
TFAP4-206ENST00000575320 DENND4BO75064 1496 aaPredicted RBP16.23■□□□□ 0.19
TFAP4-206ENST00000575320 ZNF287Q9HBT7 754 aa16.23■□□□□ 0.19
TFAP4-206ENST00000575320 NUDT16Q96DE0 195 aaKnown RBP16.23■□□□□ 0.19
TFAP4-206ENST00000575320 LRP2BPQ9P2M1 347 aa16.23■□□□□ 0.19
TFAP4-206ENST00000575320 TOP1P11387 765 aaKnown RBP16.22■□□□□ 0.19
TFAP4-206ENST00000575320 CA8P35219 290 aa16.22■□□□□ 0.19
TFAP4-206ENST00000575320 PPP4R3AQ6IN85 833 aa16.22■□□□□ 0.19
TFAP4-206ENST00000575320 MPHOSPH6Q99547 160 aaKnown RBP16.22■□□□□ 0.19
TFAP4-206ENST00000575320 RNF187Q5TA31 235 aaPredicted RBP16.22■□□□□ 0.19
TFAP4-206ENST00000575320 RPAP2Q8IXW5 612 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms