RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 GRIN3BO60391 1043 aa20.81■□□□□ 0.92
CTNS-209ENST00000574776 SSFA2P28290 1259 aa20.81■□□□□ 0.92
CTNS-209ENST00000574776 UBR3Q6ZT12 1888 aa20.8■□□□□ 0.92
CTNS-209ENST00000574776 GNPATO15228 680 aa20.8■□□□□ 0.92
CTNS-209ENST00000574776 HSP90AB1P08238 724 aaKnown RBP20.8■□□□□ 0.92
CTNS-209ENST00000574776 ZNF530Q6P9A1 599 aaPredicted RBP20.8■□□□□ 0.92
CTNS-209ENST00000574776 AEBP1Q8IUX7 1158 aa20.8■□□□□ 0.92
CTNS-209ENST00000574776 DCAF5Q96JK2 942 aa20.8■□□□□ 0.92
CTNS-209ENST00000574776 AMOTQ4VCS5 1084 aa20.79■□□□□ 0.92
CTNS-209ENST00000574776 RBM42Q9BTD8 480 aaKnown RBP20.79■□□□□ 0.92
CTNS-209ENST00000574776 PLEKHG2Q9H7P9 1386 aa20.78■□□□□ 0.92
CTNS-209ENST00000574776 CABP4P57796 275 aa20.77■□□□□ 0.92
CTNS-209ENST00000574776 SULT6B1Q6IMI4 303 aa20.77■□□□□ 0.92
CTNS-209ENST00000574776 SLC4A9Q96Q91 983 aa20.77■□□□□ 0.92
CTNS-209ENST00000574776 MTHFSP49914 203 aa20.76■□□□□ 0.91
CTNS-209ENST00000574776 IL13P35225 146 aa20.75■□□□□ 0.91
CTNS-209ENST00000574776 AMER1Q5JTC6 1135 aaPredicted RBP20.75■□□□□ 0.91
CTNS-209ENST00000574776 C1orf141Q5JVX7 400 aa20.74■□□□□ 0.91
CTNS-209ENST00000574776 TRAPPC3LQ5T215 181 aa20.74■□□□□ 0.91
CTNS-209ENST00000574776 RTCBQ9Y3I0 505 aaKnown RBP20.74■□□□□ 0.91
CTNS-209ENST00000574776 KIF7Q2M1P5 1343 aa20.74■□□□□ 0.91
CTNS-209ENST00000574776 KDM6AO15550 1401 aaPredicted RBP20.73■□□□□ 0.91
CTNS-209ENST00000574776 NFATC2IPQ8NCF5 419 aa20.73■□□□□ 0.91
CTNS-209ENST00000574776 WWC3Q9ULE0 1092 aa20.73■□□□□ 0.91
CTNS-209ENST00000574776 C1QTNF8P60827 252 aa20.72■□□□□ 0.91
CTNS-209ENST00000574776 KDRP35968 1356 aa20.72■□□□□ 0.91
CTNS-209ENST00000574776 PTCD1O75127 700 aaKnown RBP20.71■□□□□ 0.91
CTNS-209ENST00000574776 RC3H1Q5TC82 1133 aaKnown RBP20.71■□□□□ 0.91
CTNS-209ENST00000574776 MMP10P09238 476 aa20.7■□□□□ 0.9
CTNS-209ENST00000574776 ARHGEF1Q92888 912 aaKnown RBP20.7■□□□□ 0.9
CTNS-209ENST00000574776 PER1O15534 1290 aaPredicted RBP20.69■□□□□ 0.9
CTNS-209ENST00000574776 RPS6KA4O75676 772 aa20.68■□□□□ 0.9
CTNS-209ENST00000574776 NLGN1Q8N2Q7 840 aa20.68■□□□□ 0.9
CTNS-209ENST00000574776 GIGYF1O75420 1035 aaPredicted RBP20.67■□□□□ 0.9
CTNS-209ENST00000574776 RFC4P35249 363 aa20.67■□□□□ 0.9
CTNS-209ENST00000574776 CC2D1BQ5T0F9 858 aaKnown RBP20.67■□□□□ 0.9
CTNS-209ENST00000574776 CNTNAP4Q9C0A0 1308 aa20.67■□□□□ 0.9
CTNS-209ENST00000574776 HMOX1P09601 288 aa20.66■□□□□ 0.9
CTNS-209ENST00000574776 ADRA2BP18089 450 aa20.66■□□□□ 0.9
CTNS-209ENST00000574776 ZNF831Q5JPB2 1677 aa20.65■□□□□ 0.9
CTNS-209ENST00000574776 SENP3-EIF4A1A0A087X0R7 540 aa20.65■□□□□ 0.9
CTNS-209ENST00000574776 AKAP4Q5JQC9 854 aa20.65■□□□□ 0.9
CTNS-209ENST00000574776 LGR6Q9HBX8 967 aa20.65■□□□□ 0.9
CTNS-209ENST00000574776 GYS1P13807 737 aa20.64■□□□□ 0.89
CTNS-209ENST00000574776 CNGB1Q14028 1251 aaPredicted RBP20.64■□□□□ 0.89
CTNS-209ENST00000574776 MYH14Q7Z406 1995 aaKnown RBP20.64■□□□□ 0.89
CTNS-209ENST00000574776 CRKLP46109 303 aaKnown RBP20.63■□□□□ 0.89
CTNS-209ENST00000574776 COL5A3P25940 1745 aaPredicted RBP20.63■□□□□ 0.89
CTNS-209ENST00000574776 DIAPH1O60610 1272 aaKnown RBP20.62■□□□□ 0.89
CTNS-209ENST00000574776 ATP10DQ9P241 1426 aa20.61■□□□□ 0.89
CTNS-209ENST00000574776 A0A0G2JLW4 131 aa20.61■□□□□ 0.89
CTNS-209ENST00000574776 RNMTO43148 476 aaKnown RBP20.61■□□□□ 0.89
CTNS-209ENST00000574776 TGFB2P61812 414 aa20.61■□□□□ 0.89
CTNS-209ENST00000574776 SLC52A2Q9HAB3 445 aa20.61■□□□□ 0.89
CTNS-209ENST00000574776 PARP3Q9Y6F1 533 aa20.61■□□□□ 0.89
CTNS-209ENST00000574776 SCN11AQ9UI33 1791 aa20.6■□□□□ 0.89
CTNS-209ENST00000574776 MTHFSDQ2M296 383 aaKnown RBP20.6■□□□□ 0.89
CTNS-209ENST00000574776 SRP68Q9UHB9 627 aaKnown RBP20.6■□□□□ 0.89
CTNS-209ENST00000574776 SLC39A6Q13433 755 aa20.59■□□□□ 0.89
CTNS-209ENST00000574776 INTS5Q6P9B9 1019 aaKnown RBP20.59■□□□□ 0.89
CTNS-209ENST00000574776 CCDC87Q9NVE4 849 aa20.59■□□□□ 0.89
CTNS-209ENST00000574776 CICQ96RK0 1608 aaPredicted RBP20.59■□□□□ 0.89
CTNS-209ENST00000574776 DNAJC10Q8IXB1 793 aa20.58■□□□□ 0.89
CTNS-209ENST00000574776 ZNF526Q8TF50 670 aaPredicted RBP20.58■□□□□ 0.89
CTNS-209ENST00000574776 GPBP1L1Q9HC44 474 aaPredicted RBP20.58■□□□□ 0.89
CTNS-209ENST00000574776 DPEP1P16444 411 aa20.57■□□□□ 0.88
CTNS-209ENST00000574776 BCS1LQ9Y276 419 aa20.57■□□□□ 0.88
CTNS-209ENST00000574776 PXDNLA1KZ92 1463 aa20.56■□□□□ 0.88
CTNS-209ENST00000574776 FKBP8Q14318 412 aa20.56■□□□□ 0.88
CTNS-209ENST00000574776 N4BP2Q86UW6 1770 aaPredicted RBP20.56■□□□□ 0.88
CTNS-209ENST00000574776 KIF13BQ9NQT8 1826 aa20.55■□□□□ 0.88
CTNS-209ENST00000574776 ADCY9O60503 1353 aa20.55■□□□□ 0.88
CTNS-209ENST00000574776 TJP1Q07157 1748 aa20.55■□□□□ 0.88
CTNS-209ENST00000574776 USP42Q9H9J4 1324 aaKnown RBP20.54■□□□□ 0.88
CTNS-209ENST00000574776 C10orf71Q711Q0 1435 aa20.54■□□□□ 0.88
CTNS-209ENST00000574776 C4AP0C0L4 1744 aa20.54■□□□□ 0.88
CTNS-209ENST00000574776 U2SURPO15042 1029 aaKnown RBP20.54■□□□□ 0.88
CTNS-209ENST00000574776 CYP19A1P11511 503 aaPredicted RBP20.54■□□□□ 0.88
CTNS-209ENST00000574776 ARHGAP27Q6ZUM4 889 aa20.53■□□□□ 0.88
CTNS-209ENST00000574776 KIAA1551Q9HCM1 1747 aa20.53■□□□□ 0.88
CTNS-209ENST00000574776 NPC1L1Q9UHC9 1359 aa20.52■□□□□ 0.88
CTNS-209ENST00000574776 ZPR1O75312 459 aa20.52■□□□□ 0.88
CTNS-209ENST00000574776 FCHSD2O94868 740 aa20.52■□□□□ 0.88
CTNS-209ENST00000574776 KCNA3P22001 575 aa20.52■□□□□ 0.88
CTNS-209ENST00000574776 DDR1Q08345 913 aa20.52■□□□□ 0.88
CTNS-209ENST00000574776 TM4SF1P30408 202 aa20.51■□□□□ 0.87
CTNS-209ENST00000574776 USPL1Q5W0Q7 1092 aa20.51■□□□□ 0.87
CTNS-209ENST00000574776 VIRMAQ69YN4 1812 aaKnown RBP20.5■□□□□ 0.87
CTNS-209ENST00000574776 SOS1Q07889 1333 aaPredicted RBP20.5■□□□□ 0.87
CTNS-209ENST00000574776 MRC1P22897 1456 aa20.5■□□□□ 0.87
CTNS-209ENST00000574776 PIM2Q9P1W9 311 aa20.49■□□□□ 0.87
CTNS-209ENST00000574776 POLRMTO00411 1230 aaKnown RBP20.48■□□□□ 0.87
CTNS-209ENST00000574776 VSIG10Q8N0Z9 540 aa20.48■□□□□ 0.87
CTNS-209ENST00000574776 IL17REQ8NFR9 667 aa20.48■□□□□ 0.87
CTNS-209ENST00000574776 ZBTB1Q9Y2K1 713 aa20.48■□□□□ 0.87
CTNS-209ENST00000574776 KCPQ6ZWJ8 1503 aa20.48■□□□□ 0.87
CTNS-209ENST00000574776 GNAT3A8MTJ3 354 aa20.47■□□□□ 0.87
CTNS-209ENST00000574776 TTC5Q8N0Z6 440 aa20.47■□□□□ 0.87
CTNS-209ENST00000574776 NARFQ9UHQ1 456 aa20.47■□□□□ 0.87
CTNS-209ENST00000574776 COL3A1P02461 1466 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms