RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 CCDC102BQ68D86 513 aa9.73□□□□□ -0.85
CDC27-216ENST00000574304 NPAS3Q8IXF0 933 aa9.73□□□□□ -0.85
CDC27-216ENST00000574304 LARGE2Q8N3Y3 721 aa9.73□□□□□ -0.85
CDC27-216ENST00000574304 CCDC155Q8N6L0 562 aa9.73□□□□□ -0.85
CDC27-216ENST00000574304 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.73□□□□□ -0.85
CDC27-216ENST00000574304 CCDC97Q96F63 343 aaPredicted RBP9.73□□□□□ -0.85
CDC27-216ENST00000574304 ZNF594Q96JF6 807 aaPredicted RBP9.73□□□□□ -0.85
CDC27-216ENST00000574304 VRTNQ9H8Y1 702 aa9.73□□□□□ -0.85
CDC27-216ENST00000574304 ZNF358Q9NW07 568 aa9.73□□□□□ -0.85
CDC27-216ENST00000574304 SPATA31C2B4DYI2 1134 aa9.72□□□□□ -0.85
CDC27-216ENST00000574304 BACH1O14867 736 aa9.72□□□□□ -0.85
CDC27-216ENST00000574304 PPFIA3O75145 1194 aa9.72□□□□□ -0.85
CDC27-216ENST00000574304 RFX1P22670 979 aa9.72□□□□□ -0.85
CDC27-216ENST00000574304 GTF2E1P29083 439 aaPredicted RBP9.72□□□□□ -0.85
CDC27-216ENST00000574304 SMTNP53814 917 aa9.72□□□□□ -0.85
CDC27-216ENST00000574304 TMEM214Q6NUQ4 689 aaKnown RBP9.72□□□□□ -0.85
CDC27-216ENST00000574304 NBPF10Q6P3W6 841 aaKnown RBP9.72□□□□□ -0.85
CDC27-216ENST00000574304 LARP1Q6PKG0 1096 aaKnown RBP9.72□□□□□ -0.85
CDC27-216ENST00000574304 NBPF15Q8N660 670 aa9.72□□□□□ -0.85
CDC27-216ENST00000574304 SLC4A9Q96Q91 983 aa9.72□□□□□ -0.85
CDC27-216ENST00000574304 SERPINA10Q9UK55 444 aa9.72□□□□□ -0.85
CDC27-216ENST00000574304 TIMELESSQ9UNS1 1208 aa9.72□□□□□ -0.85
CDC27-216ENST00000574304 SENP3-EIF4A1A0A087X0R7 540 aa9.71□□□□□ -0.86
CDC27-216ENST00000574304 H3BM21 787 aa9.71□□□□□ -0.86
CDC27-216ENST00000574304 NFX1Q12986 1120 aaKnown RBP9.71□□□□□ -0.86
CDC27-216ENST00000574304 GNASQ5JWF2 1037 aa9.71□□□□□ -0.86
CDC27-216ENST00000574304 TAS1R3Q7RTX0 852 aa9.71□□□□□ -0.86
CDC27-216ENST00000574304 SLC16A10Q8TF71 515 aa9.71□□□□□ -0.86
CDC27-216ENST00000574304 WDR44Q5JSH3 913 aa9.7□□□□□ -0.86
CDC27-216ENST00000574304 TREML4Q6UXN2 200 aa9.7□□□□□ -0.86
CDC27-216ENST00000574304 PPARGC1BQ86YN6 1023 aaKnown RBP9.7□□□□□ -0.86
CDC27-216ENST00000574304 SIX5Q8N196 739 aa9.7□□□□□ -0.86
CDC27-216ENST00000574304 RBM19Q9Y4C8 960 aaKnown RBP9.7□□□□□ -0.86
CDC27-216ENST00000574304 A6NJY4 79 aa9.69□□□□□ -0.86
CDC27-216ENST00000574304 WFS1O76024 890 aa9.69□□□□□ -0.86
CDC27-216ENST00000574304 CRTC2Q53ET0 693 aaPredicted RBP9.69□□□□□ -0.86
CDC27-216ENST00000574304 RHBDD1Q8TEB9 315 aa9.69□□□□□ -0.86
CDC27-216ENST00000574304 C1orf115Q9H7X2 142 aa9.69□□□□□ -0.86
CDC27-216ENST00000574304 DKK1O94907 266 aa9.68□□□□□ -0.86
CDC27-216ENST00000574304 PTK7Q13308 1070 aa9.68□□□□□ -0.86
CDC27-216ENST00000574304 MTFR1Q15390 333 aa9.68□□□□□ -0.86
CDC27-216ENST00000574304 C4orf17Q53FE4 359 aa9.68□□□□□ -0.86
CDC27-216ENST00000574304 CDCA8Q53HL2 280 aa9.68□□□□□ -0.86
CDC27-216ENST00000574304 TIMMDC1Q9NPL8 285 aa9.68□□□□□ -0.86
CDC27-216ENST00000574304 FAM196BA6NMK8 535 aa9.67□□□□□ -0.86
CDC27-216ENST00000574304 USP17L15C9J2P7 530 aa9.67□□□□□ -0.86
CDC27-216ENST00000574304 USP17L10C9JJH3 530 aa9.67□□□□□ -0.86
CDC27-216ENST00000574304 USP17L13C9JLJ4 530 aa9.67□□□□□ -0.86
CDC27-216ENST00000574304 USP17L12C9JPN9 530 aa9.67□□□□□ -0.86
CDC27-216ENST00000574304 USP17L11C9JVI0 530 aa9.67□□□□□ -0.86
CDC27-216ENST00000574304 USP17L21D6R901 530 aa9.67□□□□□ -0.86
CDC27-216ENST00000574304 USP17L18D6R9N7 530 aa9.67□□□□□ -0.86
CDC27-216ENST00000574304 USP17L22D6RA61 530 aa9.67□□□□□ -0.86
CDC27-216ENST00000574304 USP17L17D6RBQ6 530 aa9.67□□□□□ -0.86
CDC27-216ENST00000574304 USP17L19D6RCP7 530 aa9.67□□□□□ -0.86
CDC27-216ENST00000574304 USP17L20D6RJB6 530 aa9.67□□□□□ -0.86
CDC27-216ENST00000574304 CDK2AP1O14519 115 aa9.67□□□□□ -0.86
CDC27-216ENST00000574304 PHKA2P46019 1235 aa9.67□□□□□ -0.86
CDC27-216ENST00000574304 USP17L24Q0WX57 530 aa9.67□□□□□ -0.86
CDC27-216ENST00000574304 CCDC82Q8N4S0 544 aa9.67□□□□□ -0.86
CDC27-216ENST00000574304 SFI1A8K8P3 1242 aa9.66□□□□□ -0.86
CDC27-216ENST00000574304 ITGA6P23229 1130 aa9.66□□□□□ -0.86
CDC27-216ENST00000574304 TNS4Q8IZW8 715 aa9.66□□□□□ -0.86
CDC27-216ENST00000574304 SCHIP1Q9P0W5 487 aaPredicted RBP9.66□□□□□ -0.86
CDC27-216ENST00000574304 IQSEC3Q9UPP2 1182 aaPredicted RBP9.66□□□□□ -0.86
CDC27-216ENST00000574304 DYRK1BQ9Y463 629 aa9.66□□□□□ -0.86
CDC27-216ENST00000574304 M0R2N6 131 aa9.65□□□□□ -0.86
CDC27-216ENST00000574304 EPHA4P54764 986 aa9.65□□□□□ -0.86
CDC27-216ENST00000574304 SEC13P55735 322 aa9.65□□□□□ -0.86
CDC27-216ENST00000574304 ANKMY2Q8IV38 441 aa9.65□□□□□ -0.86
CDC27-216ENST00000574304 IRF7Q92985 503 aa9.65□□□□□ -0.86
CDC27-216ENST00000574304 NIFKQ9BYG3 293 aaKnown RBP9.65□□□□□ -0.86
CDC27-216ENST00000574304 USP3Q9Y6I4 520 aa9.65□□□□□ -0.86
CDC27-216ENST00000574304 ERBB4Q15303 1308 aa9.64□□□□□ -0.87
CDC27-216ENST00000574304 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.64□□□□□ -0.87
CDC27-216ENST00000574304 PLA2G4AP47712 749 aa9.64□□□□□ -0.87
CDC27-216ENST00000574304 DPYDQ12882 1025 aa9.64□□□□□ -0.87
CDC27-216ENST00000574304 LCE2AQ5TA79 106 aaPredicted RBP9.64□□□□□ -0.87
CDC27-216ENST00000574304 TSEN2Q8NCE0 465 aaKnown RBP9.64□□□□□ -0.87
CDC27-216ENST00000574304 GAS2L1Q99501 681 aaPredicted RBP9.64□□□□□ -0.87
CDC27-216ENST00000574304 SUPT5HO00267 1087 aaKnown RBP9.63□□□□□ -0.87
CDC27-216ENST00000574304 SRPK2P78362 688 aaKnown RBP9.63□□□□□ -0.87
CDC27-216ENST00000574304 FOXK2Q01167 660 aa9.63□□□□□ -0.87
CDC27-216ENST00000574304 LCE2CQ5TA81 110 aa9.63□□□□□ -0.87
CDC27-216ENST00000574304 SLC9A9Q8IVB4 645 aa9.63□□□□□ -0.87
CDC27-216ENST00000574304 ZNF295-AS1Q8N0V1 137 aa9.63□□□□□ -0.87
CDC27-216ENST00000574304 CABP1Q9NZU7 370 aa9.63□□□□□ -0.87
CDC27-216ENST00000574304 A0A1B0GTH6 734 aa9.62□□□□□ -0.87
CDC27-216ENST00000574304 F11P03951 625 aa9.62□□□□□ -0.87
CDC27-216ENST00000574304 VSIG8P0DPA2 414 aa9.62□□□□□ -0.87
CDC27-216ENST00000574304 RIPOR1Q6ZS17 1223 aa9.62□□□□□ -0.87
CDC27-216ENST00000574304 NANOS1Q8WY41 292 aaKnown RBP9.62□□□□□ -0.87
CDC27-216ENST00000574304 ARXQ96QS3 562 aa9.62□□□□□ -0.87
CDC27-216ENST00000574304 CDC14CA4D256 554 aa9.61□□□□□ -0.87
CDC27-216ENST00000574304 TBCELQ5QJ74 424 aa9.61□□□□□ -0.87
CDC27-216ENST00000574304 VWA5B2Q8N398 1253 aa9.61□□□□□ -0.87
CDC27-216ENST00000574304 PBXIP1Q96AQ6 731 aa9.61□□□□□ -0.87
CDC27-216ENST00000574304 GPAMQ9HCL2 828 aa9.61□□□□□ -0.87
CDC27-216ENST00000574304 CUEDC1Q9NWM3 386 aaPredicted RBP9.61□□□□□ -0.87
CDC27-216ENST00000574304 TSPAN10Q9H1Z9 355 aaPredicted RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms