RNA–Protein interactions for RNA: ENST00000573725.1

PRPF8-209, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 5

Gene PRPF8, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-209ENST00000573725 RRS1Q15050 365 aaKnown RBP8.38□□□□□ -1.07
PRPF8-209ENST00000573725 SLC27A3Q5K4L6 730 aa8.38□□□□□ -1.07
PRPF8-209ENST00000573725 ZNF784Q8NCA9 323 aaPredicted RBP8.38□□□□□ -1.07
PRPF8-209ENST00000573725 VIRMAQ69YN4 1812 aaKnown RBP8.38□□□□□ -1.07
PRPF8-209ENST00000573725 RTL1A6NKG5 1358 aa8.37□□□□□ -1.07
PRPF8-209ENST00000573725 FYB1O15117 783 aa8.37□□□□□ -1.07
PRPF8-209ENST00000573725 NBPF6Q5VWK0 638 aa8.37□□□□□ -1.07
PRPF8-209ENST00000573725 ZCRB1Q8TBF4 217 aaKnown RBP8.37□□□□□ -1.07
PRPF8-209ENST00000573725 SYTL4Q96C24 671 aaPredicted RBP8.37□□□□□ -1.07
PRPF8-209ENST00000573725 NBPF4Q96M43 638 aa8.37□□□□□ -1.07
PRPF8-209ENST00000573725 GGNBP2Q9H3C7 697 aa8.37□□□□□ -1.07
PRPF8-209ENST00000573725 ANP32CO43423 234 aa8.36□□□□□ -1.07
PRPF8-209ENST00000573725 RGS3P49796 1198 aa8.36□□□□□ -1.07
PRPF8-209ENST00000573725 DDX10Q13206 875 aaKnown RBP8.36□□□□□ -1.07
PRPF8-209ENST00000573725 NFKBIBQ15653 356 aa8.36□□□□□ -1.07
PRPF8-209ENST00000573725 PAXIP1Q6ZW49 1069 aaPredicted RBP8.36□□□□□ -1.07
PRPF8-209ENST00000573725 USHBP1Q8N6Y0 703 aa8.36□□□□□ -1.07
PRPF8-209ENST00000573725 SLC16A10Q8TF71 515 aa8.36□□□□□ -1.07
PRPF8-209ENST00000573725 BBXQ8WY36 941 aaPredicted RBP8.36□□□□□ -1.07
PRPF8-209ENST00000573725 TFCP2L1Q9NZI6 479 aa8.36□□□□□ -1.07
PRPF8-209ENST00000573725 C4BP0C0L5 1744 aa8.36□□□□□ -1.07
PRPF8-209ENST00000573725 USP47Q96K76 1375 aa8.35□□□□□ -1.07
PRPF8-209ENST00000573725 CLCN1P35523 988 aa8.35□□□□□ -1.07
PRPF8-209ENST00000573725 PDCL3Q9H2J4 239 aa8.35□□□□□ -1.07
PRPF8-209ENST00000573725 PNNQ9H307 717 aaKnown RBP8.35□□□□□ -1.07
PRPF8-209ENST00000573725 INSRP06213 1382 aa8.35□□□□□ -1.07
PRPF8-209ENST00000573725 TMF1P82094 1093 aa8.34□□□□□ -1.07
PRPF8-209ENST00000573725 HSP90AB2PQ58FF8 381 aa8.34□□□□□ -1.07
PRPF8-209ENST00000573725 CCNL1Q9UK58 526 aaPredicted RBP8.34□□□□□ -1.07
PRPF8-209ENST00000573725 MYH14Q7Z406 1995 aaKnown RBP8.33□□□□□ -1.08
PRPF8-209ENST00000573725 CGNL1Q0VF96 1302 aa8.33□□□□□ -1.08
PRPF8-209ENST00000573725 TPM2P07951 284 aa8.33□□□□□ -1.08
PRPF8-209ENST00000573725 POLD1P28340 1107 aa8.33□□□□□ -1.08
PRPF8-209ENST00000573725 HNRNPUQ00839 825 aaKnown RBP eCLIP8.33□□□□□ -1.08
PRPF8-209ENST00000573725 GPR162Q16538 588 aa8.33□□□□□ -1.08
PRPF8-209ENST00000573725 SMG6Q86US8 1419 aaKnown RBP8.33□□□□□ -1.08
PRPF8-209ENST00000573725 COL23A1Q86Y22 540 aaPredicted RBP8.33□□□□□ -1.08
PRPF8-209ENST00000573725 NLGN2Q8NFZ4 835 aa8.33□□□□□ -1.08
PRPF8-209ENST00000573725 DDRGK1Q96HY6 314 aa8.33□□□□□ -1.08
PRPF8-209ENST00000573725 CARD14Q9BXL6 1004 aa8.33□□□□□ -1.08
PRPF8-209ENST00000573725 KIF13BQ9NQT8 1826 aa8.33□□□□□ -1.08
PRPF8-209ENST00000573725 FLT4P35916 1363 aa8.33□□□□□ -1.08
PRPF8-209ENST00000573725 NCAPD2Q15021 1401 aa8.32□□□□□ -1.08
PRPF8-209ENST00000573725 CYP27B1O15528 508 aa8.32□□□□□ -1.08
PRPF8-209ENST00000573725 TATP17735 454 aaPredicted RBP8.32□□□□□ -1.08
PRPF8-209ENST00000573725 CANXP27824 592 aaKnown RBP8.32□□□□□ -1.08
PRPF8-209ENST00000573725 RAPGEF4Q8WZA2 1011 aa8.32□□□□□ -1.08
PRPF8-209ENST00000573725 CHMP4BQ9H444 224 aaKnown RBP8.32□□□□□ -1.08
PRPF8-209ENST00000573725 EMILIN1Q9Y6C2 1016 aa8.32□□□□□ -1.08
PRPF8-209ENST00000573725 N4BP2Q86UW6 1770 aaPredicted RBP8.32□□□□□ -1.08
PRPF8-209ENST00000573725 KIF24Q5T7B8 1368 aa8.32□□□□□ -1.08
PRPF8-209ENST00000573725 PCDH11XQ9BZA7 1347 aa8.31□□□□□ -1.08
PRPF8-209ENST00000573725 PCDH11YQ9BZA8 1340 aa8.31□□□□□ -1.08
PRPF8-209ENST00000573725 NSD3Q9BZ95 1437 aa8.31□□□□□ -1.08
PRPF8-209ENST00000573725 MSL1Q68DK7 614 aa8.31□□□□□ -1.08
PRPF8-209ENST00000573725 BRCA1P38398 1863 aaKnown RBP8.31□□□□□ -1.08
PRPF8-209ENST00000573725 PALLDQ8WX93 1383 aa8.31□□□□□ -1.08
PRPF8-209ENST00000573725 COL5A3P25940 1745 aaPredicted RBP8.31□□□□□ -1.08
PRPF8-209ENST00000573725 KIAA1551Q9HCM1 1747 aa8.31□□□□□ -1.08
PRPF8-209ENST00000573725 YBX3P16989 372 aaKnown RBP eCLIP8.3□□□□□ -1.081e-6■■□□□ 13.7
PRPF8-209ENST00000573725 C1QTNF8P60827 252 aa8.3□□□□□ -1.08
PRPF8-209ENST00000573725 MPRIPQ6WCQ1 1025 aa8.3□□□□□ -1.08
PRPF8-209ENST00000573725 NPM2Q86SE8 214 aaKnown RBP8.3□□□□□ -1.08
PRPF8-209ENST00000573725 AMIGO3Q86WK7 504 aa8.3□□□□□ -1.08
PRPF8-209ENST00000573725 SMAP1Q8IYB5 467 aaPredicted RBP8.3□□□□□ -1.08
PRPF8-209ENST00000573725 ZNF831Q5JPB2 1677 aa8.3□□□□□ -1.08
PRPF8-209ENST00000573725 C4AP0C0L4 1744 aa8.29□□□□□ -1.08
PRPF8-209ENST00000573725 BRD2P25440 801 aaKnown RBP8.29□□□□□ -1.08
PRPF8-209ENST00000573725 CDCA8Q53HL2 280 aa8.29□□□□□ -1.08
PRPF8-209ENST00000573725 L1TD1Q5T7N2 865 aaKnown RBP8.29□□□□□ -1.08
PRPF8-209ENST00000573725 SCN11AQ9UI33 1791 aa8.29□□□□□ -1.08
PRPF8-209ENST00000573725 CEP350Q5VT06 3117 aa8.29□□□□□ -1.08
PRPF8-209ENST00000573725 TCERG1O14776 1098 aaKnown RBP8.28□□□□□ -1.08
PRPF8-209ENST00000573725 NKX1-1Q15270 411 aaPredicted RBP8.28□□□□□ -1.08
PRPF8-209ENST00000573725 SMIM5Q71RC9 77 aa8.28□□□□□ -1.08
PRPF8-209ENST00000573725 PIGBQ92521 554 aa8.28□□□□□ -1.08
PRPF8-209ENST00000573725 ARFGEF1Q9Y6D6 1849 aa8.27□□□□□ -1.09
PRPF8-209ENST00000573725 ZBTB22O15209 634 aa8.27□□□□□ -1.09
PRPF8-209ENST00000573725 EYA1Q99502 592 aa8.27□□□□□ -1.09
PRPF8-209ENST00000573725 SBF1O95248 1867 aa8.27□□□□□ -1.09
PRPF8-209ENST00000573725 CCDC88AQ3V6T2 1871 aa8.27□□□□□ -1.09
PRPF8-209ENST00000573725 RNF123Q5XPI4 1314 aa8.27□□□□□ -1.09
PRPF8-209ENST00000573725 SENP3-EIF4A1A0A087X0R7 540 aa8.26□□□□□ -1.09
PRPF8-209ENST00000573725 NCLP19338 710 aaKnown RBP8.26□□□□□ -1.09
PRPF8-209ENST00000573725 CNGB1Q14028 1251 aaPredicted RBP8.26□□□□□ -1.09
PRPF8-209ENST00000573725 LINC00116Q8NCU8 138 aa8.26□□□□□ -1.09
PRPF8-209ENST00000573725 FLAD1Q8NFF5 587 aa8.26□□□□□ -1.09
PRPF8-209ENST00000573725 SMARCC1Q92922 1105 aaPredicted RBP8.26□□□□□ -1.09
PRPF8-209ENST00000573725 POLKQ9UBT6 870 aa8.26□□□□□ -1.09
PRPF8-209ENST00000573725 ASAP1Q9ULH1 1129 aa8.26□□□□□ -1.09
PRPF8-209ENST00000573725 CD2APQ9Y5K6 639 aa8.26□□□□□ -1.09
PRPF8-209ENST00000573725 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.25□□□□□ -1.09
PRPF8-209ENST00000573725 LOC102724428A0A0B4J2F2 783 aa8.25□□□□□ -1.09
PRPF8-209ENST00000573725 GRIN3BO60391 1043 aa8.25□□□□□ -1.09
PRPF8-209ENST00000573725 GIGYF1O75420 1035 aaPredicted RBP8.25□□□□□ -1.09
PRPF8-209ENST00000573725 PHF14O94880 888 aa8.25□□□□□ -1.09
PRPF8-209ENST00000573725 MS4A1P11836 297 aa8.25□□□□□ -1.09
PRPF8-209ENST00000573725 PDE4AP27815 886 aa8.25□□□□□ -1.09
PRPF8-209ENST00000573725 SIK1P57059 783 aa8.25□□□□□ -1.09
PRPF8-209ENST00000573725 UTP14CQ5TAP6 766 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms