RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 CYP27B1O15528 508 aa17.52■□□□□ 0.4
TVP23A-207ENST00000573360 CCDC30Q5VVM6 783 aa17.52■□□□□ 0.4
TVP23A-207ENST00000573360 ZCRB1Q8TBF4 217 aaKnown RBP17.52■□□□□ 0.4
TVP23A-207ENST00000573360 NWD1Q149M9 1564 aa17.52■□□□□ 0.4
TVP23A-207ENST00000573360 API5Q9BZZ5 524 aaKnown RBP17.52■□□□□ 0.39
TVP23A-207ENST00000573360 RWDD1Q9H446 243 aaPredicted RBP17.51■□□□□ 0.39
TVP23A-207ENST00000573360 DCCP43146 1447 aa17.51■□□□□ 0.39
TVP23A-207ENST00000573360 NGLY1Q96IV0 654 aa17.51■□□□□ 0.39
TVP23A-207ENST00000573360 LNPKQ9C0E8 428 aa17.51■□□□□ 0.39
TVP23A-207ENST00000573360 FLIIQ13045 1269 aa17.5■□□□□ 0.39
TVP23A-207ENST00000573360 IL2RBP14784 551 aa17.5■□□□□ 0.39
TVP23A-207ENST00000573360 PHKG2P15735 406 aa17.5■□□□□ 0.39
TVP23A-207ENST00000573360 KIF24Q5T7B8 1368 aa17.49■□□□□ 0.39
TVP23A-207ENST00000573360 MEIS3Q99687 375 aa17.49■□□□□ 0.39
TVP23A-207ENST00000573360 RBM42Q9BTD8 480 aaKnown RBP17.49■□□□□ 0.39
TVP23A-207ENST00000573360 NFAT5O94916 1531 aa17.49■□□□□ 0.39
TVP23A-207ENST00000573360 CRB1P82279 1406 aa17.48■□□□□ 0.39
TVP23A-207ENST00000573360 JARID2Q92833 1246 aaPredicted RBP17.48■□□□□ 0.39
TVP23A-207ENST00000573360 ACSBG1Q96GR2 724 aa17.48■□□□□ 0.39
TVP23A-207ENST00000573360 ANKRD45Q5TZF3 282 aa17.48■□□□□ 0.39
TVP23A-207ENST00000573360 PXDNQ92626 1479 aa17.48■□□□□ 0.39
TVP23A-207ENST00000573360 WDR17Q8IZU2 1322 aa17.48■□□□□ 0.39
TVP23A-207ENST00000573360 EIF4A1P60842 406 aaKnown RBP17.48■□□□□ 0.39
TVP23A-207ENST00000573360 FAM161AQ3B820 660 aa17.48■□□□□ 0.39
TVP23A-207ENST00000573360 PROSER3Q2NL68 480 aa17.47■□□□□ 0.39
TVP23A-207ENST00000573360 PDZRN3Q9UPQ7 1066 aa17.47■□□□□ 0.39
TVP23A-207ENST00000573360 NCBP3Q53F19 620 aaKnown RBP17.47■□□□□ 0.39
TVP23A-207ENST00000573360 FAM182BQ5T319 152 aa17.47■□□□□ 0.39
TVP23A-207ENST00000573360 ZNF496Q96IT1 587 aaPredicted RBP17.47■□□□□ 0.39
TVP23A-207ENST00000573360 HTATSF1O43719 755 aaKnown RBP17.46■□□□□ 0.39
TVP23A-207ENST00000573360 MEX3CQ5U5Q3 659 aaKnown RBP17.46■□□□□ 0.39
TVP23A-207ENST00000573360 NCOA3Q9Y6Q9 1424 aa17.46■□□□□ 0.39
TVP23A-207ENST00000573360 MED1Q15648 1581 aaPredicted RBP17.46■□□□□ 0.39
TVP23A-207ENST00000573360 PI4KAP2A4QPH2 592 aa17.45■□□□□ 0.38
TVP23A-207ENST00000573360 PI4KAP1Q8N8J0 262 aa17.45■□□□□ 0.38
TVP23A-207ENST00000573360 ZNF790Q6PG37 636 aa17.45■□□□□ 0.38
TVP23A-207ENST00000573360 LTN1O94822 1766 aa17.44■□□□□ 0.38
TVP23A-207ENST00000573360 IL27Q8NEV9 243 aa17.44■□□□□ 0.38
TVP23A-207ENST00000573360 USP16Q9Y5T5 823 aa17.44■□□□□ 0.38
TVP23A-207ENST00000573360 MEGF6O75095 1541 aa17.44■□□□□ 0.38
TVP23A-207ENST00000573360 SLC52A2Q9HAB3 445 aa17.43■□□□□ 0.38
TVP23A-207ENST00000573360 ZBTB40Q9NUA8 1239 aa17.43■□□□□ 0.38
TVP23A-207ENST00000573360 ZBTB7BO15156 539 aaPredicted RBP17.42■□□□□ 0.38
TVP23A-207ENST00000573360 DCAF5Q96JK2 942 aa17.42■□□□□ 0.38
TVP23A-207ENST00000573360 EXOC5O00471 708 aa17.41■□□□□ 0.38
TVP23A-207ENST00000573360 FAM98CQ17RN3 349 aaKnown RBP17.41■□□□□ 0.38
TVP23A-207ENST00000573360 RIC3Q7Z5B4 369 aa17.41■□□□□ 0.38
TVP23A-207ENST00000573360 NFKBIBQ15653 356 aa17.41■□□□□ 0.38
TVP23A-207ENST00000573360 GIGYF1O75420 1035 aaPredicted RBP17.4■□□□□ 0.38
TVP23A-207ENST00000573360 KDM2BQ8NHM5 1336 aa17.4■□□□□ 0.38
TVP23A-207ENST00000573360 TMOD3Q9NYL9 352 aa17.4■□□□□ 0.38
TVP23A-207ENST00000573360 SMARCA5O60264 1052 aaPredicted RBP17.4■□□□□ 0.38
TVP23A-207ENST00000573360 CWF19L2Q2TBE0 894 aaKnown RBP17.4■□□□□ 0.38
TVP23A-207ENST00000573360 CARD10Q9BWT7 1032 aa17.4■□□□□ 0.38
TVP23A-207ENST00000573360 DLG5Q8TDM6 1919 aa17.4■□□□□ 0.38
TVP23A-207ENST00000573360 RGPD2P0DJD1 1756 aa17.39■□□□□ 0.37
TVP23A-207ENST00000573360 C9orf78Q9NZ63 289 aaPredicted RBP17.39■□□□□ 0.37
TVP23A-207ENST00000573360 ATP5J2-PTCD1G3V325 749 aa17.39■□□□□ 0.37
TVP23A-207ENST00000573360 MAP3K2Q9Y2U5 619 aa17.39■□□□□ 0.37
TVP23A-207ENST00000573360 CAMTA1Q9Y6Y1 1673 aa17.38■□□□□ 0.37
TVP23A-207ENST00000573360 EXOC6BQ9Y2D4 811 aa17.38■□□□□ 0.37
TVP23A-207ENST00000573360 ASAP1Q9ULH1 1129 aa17.38■□□□□ 0.37
TVP23A-207ENST00000573360 A1BGP04217 495 aa17.37■□□□□ 0.37
TVP23A-207ENST00000573360 KCNQ4P56696 695 aa17.37■□□□□ 0.37
TVP23A-207ENST00000573360 COPS6Q7L5N1 327 aa17.37■□□□□ 0.37
TVP23A-207ENST00000573360 SLKQ9H2G2 1235 aaPredicted RBP17.37■□□□□ 0.37
TVP23A-207ENST00000573360 DBF4Q9UBU7 674 aaPredicted RBP17.37■□□□□ 0.37
TVP23A-207ENST00000573360 PCDH11XQ9BZA7 1347 aa17.37■□□□□ 0.37
TVP23A-207ENST00000573360 PCDH11YQ9BZA8 1340 aa17.37■□□□□ 0.37
TVP23A-207ENST00000573360 HSP90AB1P08238 724 aaKnown RBP17.37■□□□□ 0.37
TVP23A-207ENST00000573360 ARHGAP45Q92619 1136 aa17.37■□□□□ 0.37
TVP23A-207ENST00000573360 LRRFIP2Q9Y608 721 aaKnown RBP17.37■□□□□ 0.37
TVP23A-207ENST00000573360 XAGE3Q8WTP9 111 aa17.36■□□□□ 0.37
TVP23A-207ENST00000573360 KIF1AQ12756 1690 aa17.36■□□□□ 0.37
TVP23A-207ENST00000573360 PRIM1P49642 420 aaKnown RBP17.36■□□□□ 0.37
TVP23A-207ENST00000573360 FMNL2Q96PY5 1086 aa17.36■□□□□ 0.37
TVP23A-207ENST00000573360 UBTFL1P0CB47 393 aaPredicted RBP17.36■□□□□ 0.37
TVP23A-207ENST00000573360 DDB1Q16531 1140 aa17.36■□□□□ 0.37
TVP23A-207ENST00000573360 C8orf34Q49A92 452 aa17.36■□□□□ 0.37
TVP23A-207ENST00000573360 SRCIN1Q9C0H9 1055 aa17.36■□□□□ 0.37
TVP23A-207ENST00000573360 ZBTB3Q9H5J0 574 aa17.36■□□□□ 0.37
TVP23A-207ENST00000573360 CHMP3Q9Y3E7 222 aa17.35■□□□□ 0.37
TVP23A-207ENST00000573360 SLIT3O75094 1523 aa17.35■□□□□ 0.37
TVP23A-207ENST00000573360 FAM177BA6PVY3 158 aa17.35■□□□□ 0.37
TVP23A-207ENST00000573360 OS9Q13438 667 aaPredicted RBP17.35■□□□□ 0.37
TVP23A-207ENST00000573360 RGPD5Q99666 1765 aa17.35■□□□□ 0.37
TVP23A-207ENST00000573360 SPRYD3Q8NCJ5 442 aa17.35■□□□□ 0.37
TVP23A-207ENST00000573360 DNAAF4Q8WXU2 420 aa17.35■□□□□ 0.37
TVP23A-207ENST00000573360 ABCC4O15439 1325 aa17.34■□□□□ 0.37
TVP23A-207ENST00000573360 PTPRCP08575 1304 aa17.34■□□□□ 0.37
TVP23A-207ENST00000573360 C16orf71Q8IYS4 520 aaPredicted RBP17.34■□□□□ 0.37
TVP23A-207ENST00000573360 CEMIPQ8WUJ3 1361 aa17.34■□□□□ 0.37
TVP23A-207ENST00000573360 CPDO75976 1380 aa17.34■□□□□ 0.37
TVP23A-207ENST00000573360 TSHZ3Q63HK5 1081 aa17.34■□□□□ 0.37
TVP23A-207ENST00000573360 CHMP4BQ9H444 224 aaKnown RBP17.34■□□□□ 0.37
TVP23A-207ENST00000573360 SNRPA1P09661 255 aaKnown RBP17.33■□□□□ 0.37
TVP23A-207ENST00000573360 HSPA1LP34931 641 aa17.33■□□□□ 0.37
TVP23A-207ENST00000573360 SIRT2Q8IXJ6 389 aa17.33■□□□□ 0.37
TVP23A-207ENST00000573360 FRAT2O75474 233 aaPredicted RBP17.33■□□□□ 0.36
TVP23A-207ENST00000573360 NBPF7P0C2Y1 421 aaPredicted RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms