RNA–Protein interactions for RNA: ENST00000573331.5

TMEM256-PLSCR3-204, Transcript of TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

APPRIS P5 TSL 2 BASIC

Gene TMEM256-PLSCR3, Length 2,557 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3-204ENST00000573331 EXOC6BQ9Y2D4 811 aa28.54■■■□□ 2.16
TMEM256-PLSCR3-204ENST00000573331 PHAXQ9H814 394 aaKnown RBP28.54■■■□□ 2.16
TMEM256-PLSCR3-204ENST00000573331 ARHGEF25Q86VW2 580 aa28.53■■■□□ 2.16
TMEM256-PLSCR3-204ENST00000573331 PROSER2Q86WR7 435 aaPredicted RBP28.53■■■□□ 2.16
TMEM256-PLSCR3-204ENST00000573331 RBM42Q9BTD8 480 aaKnown RBP28.53■■■□□ 2.16
TMEM256-PLSCR3-204ENST00000573331 ZNF530Q6P9A1 599 aaPredicted RBP28.53■■■□□ 2.16
TMEM256-PLSCR3-204ENST00000573331 HSP90AB1P08238 724 aaKnown RBP28.52■■■□□ 2.16
TMEM256-PLSCR3-204ENST00000573331 FAM208AQ9UK61 1670 aaKnown RBP28.52■■■□□ 2.16
TMEM256-PLSCR3-204ENST00000573331 EIF4A1P60842 406 aaKnown RBP28.51■■■□□ 2.15
TMEM256-PLSCR3-204ENST00000573331 PLEKHO1Q53GL0 409 aaPredicted RBP28.51■■■□□ 2.15
TMEM256-PLSCR3-204ENST00000573331 MPRIPQ6WCQ1 1025 aa28.51■■■□□ 2.15
TMEM256-PLSCR3-204ENST00000573331 PNMA6EA0A0J9YXQ4 647 aa28.5■■■□□ 2.15
TMEM256-PLSCR3-204ENST00000573331 EIF5BO60841 1220 aaKnown RBP28.5■■■□□ 2.15
TMEM256-PLSCR3-204ENST00000573331 TEFQ10587 303 aa28.5■■■□□ 2.15
TMEM256-PLSCR3-204ENST00000573331 AKAP4Q5JQC9 854 aa28.5■■■□□ 2.15
TMEM256-PLSCR3-204ENST00000573331 CD2BP2O95400 341 aaKnown RBP28.5■■■□□ 2.15
TMEM256-PLSCR3-204ENST00000573331 KCNQ3O43525 872 aa28.49■■■□□ 2.15
TMEM256-PLSCR3-204ENST00000573331 ATP8B2P98198 1209 aa28.49■■■□□ 2.15
TMEM256-PLSCR3-204ENST00000573331 LRRFIP2Q9Y608 721 aaKnown RBP28.49■■■□□ 2.15
TMEM256-PLSCR3-204ENST00000573331 KRT28Q7Z3Y7 464 aa28.49■■■□□ 2.15
TMEM256-PLSCR3-204ENST00000573331 USP44Q9H0E7 712 aa28.48■■■□□ 2.15
TMEM256-PLSCR3-204ENST00000573331 CASC1Q6TDU7 716 aa28.48■■■□□ 2.15
TMEM256-PLSCR3-204ENST00000573331 ANKRD24Q8TF21 1146 aa28.48■■■□□ 2.15
TMEM256-PLSCR3-204ENST00000573331 PDE1AP54750 535 aa28.47■■■□□ 2.15
TMEM256-PLSCR3-204ENST00000573331 BTBD11A6QL63 1104 aa28.47■■■□□ 2.15
TMEM256-PLSCR3-204ENST00000573331 NCOA3Q9Y6Q9 1424 aa28.46■■■□□ 2.15
TMEM256-PLSCR3-204ENST00000573331 MCM4P33991 863 aa28.46■■■□□ 2.15
TMEM256-PLSCR3-204ENST00000573331 AMOTQ4VCS5 1084 aa28.46■■■□□ 2.15
TMEM256-PLSCR3-204ENST00000573331 LRRCC1Q9C099 1032 aa28.46■■■□□ 2.15
TMEM256-PLSCR3-204ENST00000573331 RGPD2P0DJD1 1756 aa28.45■■■□□ 2.15
TMEM256-PLSCR3-204ENST00000573331 UBTFL1P0CB47 393 aaPredicted RBP28.45■■■□□ 2.15
TMEM256-PLSCR3-204ENST00000573331 USP26Q9BXU7 913 aa28.45■■■□□ 2.15
TMEM256-PLSCR3-204ENST00000573331 C1orf141Q5JVX7 400 aa28.45■■■□□ 2.14
TMEM256-PLSCR3-204ENST00000573331 OSBPL3Q9H4L5 887 aa28.45■■■□□ 2.14
TMEM256-PLSCR3-204ENST00000573331 CHPF2Q9P2E5 772 aa28.45■■■□□ 2.14
TMEM256-PLSCR3-204ENST00000573331 AXIN2Q9Y2T1 843 aa28.45■■■□□ 2.14
TMEM256-PLSCR3-204ENST00000573331 CACNA1FO60840 1977 aa28.44■■■□□ 2.14
TMEM256-PLSCR3-204ENST00000573331 HSP90AA1P07900 732 aaKnown RBP28.44■■■□□ 2.14
TMEM256-PLSCR3-204ENST00000573331 K7ELQ4 463 aaPredicted RBP28.43■■■□□ 2.14
TMEM256-PLSCR3-204ENST00000573331 DDIT3P35638 169 aa28.43■■■□□ 2.14
TMEM256-PLSCR3-204ENST00000573331 TSHZ3Q63HK5 1081 aa28.43■■■□□ 2.14
TMEM256-PLSCR3-204ENST00000573331 HOXB7P09629 217 aa28.42■■■□□ 2.14
TMEM256-PLSCR3-204ENST00000573331 FOXD4L1Q9NU39 408 aa28.42■■■□□ 2.14
TMEM256-PLSCR3-204ENST00000573331 SRCIN1Q9C0H9 1055 aa28.42■■■□□ 2.14
TMEM256-PLSCR3-204ENST00000573331 C19orf44Q9H6X5 657 aa28.42■■■□□ 2.14
TMEM256-PLSCR3-204ENST00000573331 PHRF1Q9P1Y6 1649 aaKnown RBP28.41■■■□□ 2.14
TMEM256-PLSCR3-204ENST00000573331 RNMTO43148 476 aaKnown RBP28.41■■■□□ 2.14
TMEM256-PLSCR3-204ENST00000573331 PXDNLA1KZ92 1463 aa28.41■■■□□ 2.14
TMEM256-PLSCR3-204ENST00000573331 MED1Q15648 1581 aaPredicted RBP28.41■■■□□ 2.14
TMEM256-PLSCR3-204ENST00000573331 ANXA1P04083 346 aa28.41■■■□□ 2.14
TMEM256-PLSCR3-204ENST00000573331 SLIT3O75094 1523 aa28.4■■■□□ 2.14
TMEM256-PLSCR3-204ENST00000573331 CHMP4AQ9BY43 222 aa28.4■■■□□ 2.14
TMEM256-PLSCR3-204ENST00000573331 IBTKQ9P2D0 1353 aaPredicted RBP28.39■■■□□ 2.14
TMEM256-PLSCR3-204ENST00000573331 PI4KAP2A4QPH2 592 aa28.39■■■□□ 2.13
TMEM256-PLSCR3-204ENST00000573331 ZC3H6P61129 1189 aaKnown RBP28.39■■■□□ 2.13
TMEM256-PLSCR3-204ENST00000573331 PI4KAP1Q8N8J0 262 aa28.39■■■□□ 2.13
TMEM256-PLSCR3-204ENST00000573331 C1orf167Q5SNV9 1468 aa28.39■■■□□ 2.13
TMEM256-PLSCR3-204ENST00000573331 RABEP1Q15276 862 aa28.38■■■□□ 2.13
TMEM256-PLSCR3-204ENST00000573331 SALL3Q9BXA9 1300 aa28.37■■■□□ 2.13
TMEM256-PLSCR3-204ENST00000573331 PXDNQ92626 1479 aa28.37■■■□□ 2.13
TMEM256-PLSCR3-204ENST00000573331 MX1P20591 662 aa28.37■■■□□ 2.13
TMEM256-PLSCR3-204ENST00000573331 DNAAF4Q8WXU2 420 aa28.37■■■□□ 2.13
TMEM256-PLSCR3-204ENST00000573331 REC8O95072 547 aa28.36■■■□□ 2.13
TMEM256-PLSCR3-204ENST00000573331 CIZ1Q9ULV3 898 aaPredicted RBP28.36■■■□□ 2.13
TMEM256-PLSCR3-204ENST00000573331 ERC2O15083 957 aa28.35■■■□□ 2.13
TMEM256-PLSCR3-204ENST00000573331 PPP1R42Q7Z4L9 355 aa28.35■■■□□ 2.13
TMEM256-PLSCR3-204ENST00000573331 SSH3Q8TE77 659 aa28.35■■■□□ 2.13
TMEM256-PLSCR3-204ENST00000573331 LMO7Q8WWI1 1683 aa28.34■■■□□ 2.13
TMEM256-PLSCR3-204ENST00000573331 NBPF7P0C2Y1 421 aaPredicted RBP28.34■■■□□ 2.13
TMEM256-PLSCR3-204ENST00000573331 BEND3Q5T5X7 828 aa28.34■■■□□ 2.13
TMEM256-PLSCR3-204ENST00000573331 NCAPD2Q15021 1401 aa28.34■■■□□ 2.13
TMEM256-PLSCR3-204ENST00000573331 KDM3BQ7LBC6 1761 aa28.33■■■□□ 2.13
TMEM256-PLSCR3-204ENST00000573331 TNPO1Q92973 898 aaKnown RBP28.33■■■□□ 2.13
TMEM256-PLSCR3-204ENST00000573331 IL1RAPL2Q9NP60 686 aa28.33■■■□□ 2.13
TMEM256-PLSCR3-204ENST00000573331 DBF4Q9UBU7 674 aaPredicted RBP28.33■■■□□ 2.13
TMEM256-PLSCR3-204ENST00000573331 ATF3P18847 181 aa28.32■■■□□ 2.12
TMEM256-PLSCR3-204ENST00000573331 DDX17Q92841 729 aaKnown RBP28.32■■■□□ 2.12
TMEM256-PLSCR3-204ENST00000573331 SURF6O75683 361 aaKnown RBP28.32■■■□□ 2.12
TMEM256-PLSCR3-204ENST00000573331 IL27Q8NEV9 243 aa28.32■■■□□ 2.12
TMEM256-PLSCR3-204ENST00000573331 BRPF3Q9ULD4 1205 aa28.32■■■□□ 2.12
TMEM256-PLSCR3-204ENST00000573331 GIGYF1O75420 1035 aaPredicted RBP28.31■■■□□ 2.12
TMEM256-PLSCR3-204ENST00000573331 TRPM3Q9HCF6 1732 aaPredicted RBP28.31■■■□□ 2.12
TMEM256-PLSCR3-204ENST00000573331 TRIM6-TRIM34B2RNG4 842 aa28.31■■■□□ 2.12
TMEM256-PLSCR3-204ENST00000573331 RILPL2Q969X0 211 aa28.31■■■□□ 2.12
TMEM256-PLSCR3-204ENST00000573331 ERBB3P21860 1342 aa28.31■■■□□ 2.12
TMEM256-PLSCR3-204ENST00000573331 SRGAP3O43295 1099 aa28.3■■■□□ 2.12
TMEM256-PLSCR3-204ENST00000573331 RAB3GAP1Q15042 981 aa28.3■■■□□ 2.12
TMEM256-PLSCR3-204ENST00000573331 PRAMEF22A3QJZ6 481 aa28.29■■■□□ 2.12
TMEM256-PLSCR3-204ENST00000573331 TRAK2O60296 914 aa28.29■■■□□ 2.12
TMEM256-PLSCR3-204ENST00000573331 N4BP2Q86UW6 1770 aaPredicted RBP28.29■■■□□ 2.12
TMEM256-PLSCR3-204ENST00000573331 STAP2Q9UGK3 403 aa28.29■■■□□ 2.12
TMEM256-PLSCR3-204ENST00000573331 ADCY9O60503 1353 aa28.28■■■□□ 2.12
TMEM256-PLSCR3-204ENST00000573331 POLA2Q14181 598 aa28.28■■■□□ 2.12
TMEM256-PLSCR3-204ENST00000573331 GZF1Q9H116 711 aaPredicted RBP28.28■■■□□ 2.12
TMEM256-PLSCR3-204ENST00000573331 DDX11L8A8MPP1 907 aa28.28■■■□□ 2.12
TMEM256-PLSCR3-204ENST00000573331 PROSER3Q2NL68 480 aa28.28■■■□□ 2.12
TMEM256-PLSCR3-204ENST00000573331 NLRP2Q9NX02 1062 aa28.27■■■□□ 2.12
TMEM256-PLSCR3-204ENST00000573331 RAB11FIP3O75154 756 aa28.26■■■□□ 2.11
TMEM256-PLSCR3-204ENST00000573331 NUTM1Q86Y26 1132 aa28.26■■■□□ 2.11
TMEM256-PLSCR3-204ENST00000573331 RAPGEF4Q8WZA2 1011 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms