RNA–Protein interactions for RNA: ENST00000572694.1

ATP2A3-212, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 894 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-212ENST00000572694 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.26■■□□□ 1.31
ATP2A3-212ENST00000572694 IL13P35225 146 aa23.26■■□□□ 1.31
ATP2A3-212ENST00000572694 MSL1Q68DK7 614 aa23.26■■□□□ 1.31
ATP2A3-212ENST00000572694 PER1O15534 1290 aaPredicted RBP23.25■■□□□ 1.31
ATP2A3-212ENST00000572694 ITPK1Q13572 414 aa23.25■■□□□ 1.31
ATP2A3-212ENST00000572694 ZNF530Q6P9A1 599 aaPredicted RBP23.24■■□□□ 1.31
ATP2A3-212ENST00000572694 KDRP35968 1356 aa23.24■■□□□ 1.31
ATP2A3-212ENST00000572694 GRIN3BO60391 1043 aa23.23■■□□□ 1.31
ATP2A3-212ENST00000572694 SULT6B1Q6IMI4 303 aa23.23■■□□□ 1.31
ATP2A3-212ENST00000572694 ZNF831Q5JPB2 1677 aa23.22■■□□□ 1.31
ATP2A3-212ENST00000572694 AEBP1Q8IUX7 1158 aa23.22■■□□□ 1.31
ATP2A3-212ENST00000572694 PHF14O94880 888 aa23.21■■□□□ 1.31
ATP2A3-212ENST00000572694 MTHFSP49914 203 aa23.21■■□□□ 1.31
ATP2A3-212ENST00000572694 CABP4P57796 275 aa23.21■■□□□ 1.31
ATP2A3-212ENST00000572694 RC3H1Q5TC82 1133 aaKnown RBP23.21■■□□□ 1.31
ATP2A3-212ENST00000572694 GNPATO15228 680 aa23.2■■□□□ 1.3
ATP2A3-212ENST00000572694 C1orf141Q5JVX7 400 aa23.2■■□□□ 1.3
ATP2A3-212ENST00000572694 SLC4A9Q96Q91 983 aa23.2■■□□□ 1.3
ATP2A3-212ENST00000572694 KDM6AO15550 1401 aaPredicted RBP23.19■■□□□ 1.3
ATP2A3-212ENST00000572694 SMIM5Q71RC9 77 aa23.19■■□□□ 1.3
ATP2A3-212ENST00000572694 PELP1Q8IZL8 1130 aaKnown RBP23.19■■□□□ 1.3
ATP2A3-212ENST00000572694 RBM42Q9BTD8 480 aaKnown RBP23.18■■□□□ 1.3
ATP2A3-212ENST00000572694 YBX3P16989 372 aaKnown RBP eCLIP23.17■■□□□ 1.3
ATP2A3-212ENST00000572694 TRAPPC3LQ5T215 181 aa23.17■■□□□ 1.3
ATP2A3-212ENST00000572694 NFATC2IPQ8NCF5 419 aa23.16■■□□□ 1.3
ATP2A3-212ENST00000572694 RTCBQ9Y3I0 505 aaKnown RBP23.16■■□□□ 1.3
ATP2A3-212ENST00000572694 ADRA2BP18089 450 aa23.15■■□□□ 1.3
ATP2A3-212ENST00000572694 AKAP4Q5JQC9 854 aa23.15■■□□□ 1.3
ATP2A3-212ENST00000572694 CNTNAP4Q9C0A0 1308 aa23.14■■□□□ 1.3
ATP2A3-212ENST00000572694 GOLGB1Q14789 3259 aaKnown RBP23.14■■□□□ 1.3
ATP2A3-212ENST00000572694 RPS6KA4O75676 772 aa23.14■■□□□ 1.29
ATP2A3-212ENST00000572694 NPC1L1Q9UHC9 1359 aa23.14■■□□□ 1.29
ATP2A3-212ENST00000572694 NLGN1Q8N2Q7 840 aa23.13■■□□□ 1.29
ATP2A3-212ENST00000572694 ARHGEF1Q92888 912 aaKnown RBP23.11■■□□□ 1.29
ATP2A3-212ENST00000572694 SCN11AQ9UI33 1791 aa23.11■■□□□ 1.29
ATP2A3-212ENST00000572694 COL5A3P25940 1745 aaPredicted RBP23.11■■□□□ 1.29
ATP2A3-212ENST00000572694 DIAPH1O60610 1272 aaKnown RBP23.1■■□□□ 1.29
ATP2A3-212ENST00000572694 CC2D1BQ5T0F9 858 aaKnown RBP23.1■■□□□ 1.29
ATP2A3-212ENST00000572694 MYH14Q7Z406 1995 aaKnown RBP23.09■■□□□ 1.29
ATP2A3-212ENST00000572694 PTCD1O75127 700 aaKnown RBP23.09■■□□□ 1.29
ATP2A3-212ENST00000572694 MMP10P09238 476 aa23.08■■□□□ 1.29
ATP2A3-212ENST00000572694 SLC52A2Q9HAB3 445 aa23.08■■□□□ 1.29
ATP2A3-212ENST00000572694 HMOX1P09601 288 aa23.07■■□□□ 1.28
ATP2A3-212ENST00000572694 RFC4P35249 363 aa23.07■■□□□ 1.28
ATP2A3-212ENST00000572694 LGR6Q9HBX8 967 aa23.07■■□□□ 1.28
ATP2A3-212ENST00000572694 GYS1P13807 737 aa23.06■■□□□ 1.28
ATP2A3-212ENST00000572694 RNMTO43148 476 aaKnown RBP23.05■■□□□ 1.28
ATP2A3-212ENST00000572694 CRKLP46109 303 aaKnown RBP23.05■■□□□ 1.28
ATP2A3-212ENST00000572694 TGFB2P61812 414 aa23.05■■□□□ 1.28
ATP2A3-212ENST00000572694 MTHFSDQ2M296 383 aaKnown RBP23.05■■□□□ 1.28
ATP2A3-212ENST00000572694 CICQ96RK0 1608 aaPredicted RBP23.04■■□□□ 1.28
ATP2A3-212ENST00000572694 C1QTNF8P60827 252 aa23.04■■□□□ 1.28
ATP2A3-212ENST00000572694 KIF13BQ9NQT8 1826 aa23.03■■□□□ 1.28
ATP2A3-212ENST00000572694 INTS5Q6P9B9 1019 aaKnown RBP23.01■■□□□ 1.27
ATP2A3-212ENST00000572694 MRC1P22897 1456 aa23■■□□□ 1.27
ATP2A3-212ENST00000572694 CCDC87Q9NVE4 849 aa23■■□□□ 1.27
ATP2A3-212ENST00000572694 PARP3Q9Y6F1 533 aa23■■□□□ 1.27
ATP2A3-212ENST00000572694 VIRMAQ69YN4 1812 aaKnown RBP23■■□□□ 1.27
ATP2A3-212ENST00000572694 ADAMTS7Q9UKP4 1686 aa23■■□□□ 1.27
ATP2A3-212ENST00000572694 TJP1Q07157 1748 aa22.99■■□□□ 1.27
ATP2A3-212ENST00000572694 VSIG10Q8N0Z9 540 aa22.99■■□□□ 1.27
ATP2A3-212ENST00000572694 GIGYF1O75420 1035 aaPredicted RBP22.98■■□□□ 1.27
ATP2A3-212ENST00000572694 DNAJC10Q8IXB1 793 aa22.98■■□□□ 1.27
ATP2A3-212ENST00000572694 USP42Q9H9J4 1324 aaKnown RBP22.98■■□□□ 1.27
ATP2A3-212ENST00000572694 COL3A1P02461 1466 aaPredicted RBP22.98■■□□□ 1.27
ATP2A3-212ENST00000572694 C4AP0C0L4 1744 aa22.97■■□□□ 1.27
ATP2A3-212ENST00000572694 CYP19A1P11511 503 aaPredicted RBP22.97■■□□□ 1.27
ATP2A3-212ENST00000572694 SLC39A6Q13433 755 aa22.97■■□□□ 1.27
ATP2A3-212ENST00000572694 C10orf71Q711Q0 1435 aa22.96■■□□□ 1.27
ATP2A3-212ENST00000572694 PXDNLA1KZ92 1463 aa22.96■■□□□ 1.27
ATP2A3-212ENST00000572694 A0A0G2JLW4 131 aa22.95■■□□□ 1.26
ATP2A3-212ENST00000572694 FKBP8Q14318 412 aa22.95■■□□□ 1.26
ATP2A3-212ENST00000572694 GAS2L2Q8NHY3 880 aa22.95■■□□□ 1.26
ATP2A3-212ENST00000572694 KIAA1551Q9HCM1 1747 aa22.94■■□□□ 1.26
ATP2A3-212ENST00000572694 ADCY9O60503 1353 aa22.94■■□□□ 1.26
ATP2A3-212ENST00000572694 U2SURPO15042 1029 aaKnown RBP22.94■■□□□ 1.26
ATP2A3-212ENST00000572694 TM4SF1P30408 202 aa22.94■■□□□ 1.26
ATP2A3-212ENST00000572694 SRP68Q9UHB9 627 aaKnown RBP22.94■■□□□ 1.26
ATP2A3-212ENST00000572694 ATP10DQ9P241 1426 aa22.93■■□□□ 1.26
ATP2A3-212ENST00000572694 SOS1Q07889 1333 aaPredicted RBP22.93■■□□□ 1.26
ATP2A3-212ENST00000572694 GNAT3A8MTJ3 354 aa22.93■■□□□ 1.26
ATP2A3-212ENST00000572694 IL17REQ8NFR9 667 aa22.93■■□□□ 1.26
ATP2A3-212ENST00000572694 WWC3Q9ULE0 1092 aa22.93■■□□□ 1.26
ATP2A3-212ENST00000572694 N4BP2Q86UW6 1770 aaPredicted RBP22.92■■□□□ 1.26
ATP2A3-212ENST00000572694 ZPR1O75312 459 aa22.92■■□□□ 1.26
ATP2A3-212ENST00000572694 DPEP1P16444 411 aa22.92■■□□□ 1.26
ATP2A3-212ENST00000572694 CFAP53Q96M91 514 aa22.92■■□□□ 1.26
ATP2A3-212ENST00000572694 KCPQ6ZWJ8 1503 aa22.92■■□□□ 1.26
ATP2A3-212ENST00000572694 CNGB1Q14028 1251 aaPredicted RBP22.91■■□□□ 1.26
ATP2A3-212ENST00000572694 KCNA3P22001 575 aa22.9■■□□□ 1.26
ATP2A3-212ENST00000572694 GPBP1L1Q9HC44 474 aaPredicted RBP22.9■■□□□ 1.26
ATP2A3-212ENST00000572694 NARFQ9UHQ1 456 aa22.9■■□□□ 1.26
ATP2A3-212ENST00000572694 DDR1Q08345 913 aa22.89■■□□□ 1.25
ATP2A3-212ENST00000572694 USPL1Q5W0Q7 1092 aa22.89■■□□□ 1.25
ATP2A3-212ENST00000572694 TTC5Q8N0Z6 440 aa22.89■■□□□ 1.25
ATP2A3-212ENST00000572694 BCS1LQ9Y276 419 aa22.89■■□□□ 1.25
ATP2A3-212ENST00000572694 UBR2Q8IWV8 1755 aa22.89■■□□□ 1.25
ATP2A3-212ENST00000572694 POLRMTO00411 1230 aaKnown RBP22.88■■□□□ 1.25
ATP2A3-212ENST00000572694 TEFQ10587 303 aa22.88■■□□□ 1.25
ATP2A3-212ENST00000572694 TEX13AQ9BXU3 409 aaPredicted RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms