RNA–Protein interactions for RNA: ENST00000572290.1

NUP88-204, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 615 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-204ENST00000572290 AK7Q96M32 723 aa26.96■■□□□ 1.91
NUP88-204ENST00000572290 PRKAR2BP31323 418 aa26.95■■□□□ 1.9
NUP88-204ENST00000572290 GAS2L2Q8NHY3 880 aa26.95■■□□□ 1.9
NUP88-204ENST00000572290 RBM42Q9BTD8 480 aaKnown RBP26.95■■□□□ 1.9
NUP88-204ENST00000572290 RSPH6AQ9H0K4 717 aa26.95■■□□□ 1.9
NUP88-204ENST00000572290 MSH5O43196 834 aa26.94■■□□□ 1.9
NUP88-204ENST00000572290 ITPK1Q13572 414 aa26.94■■□□□ 1.9
NUP88-204ENST00000572290 COL23A1Q86Y22 540 aaPredicted RBP26.94■■□□□ 1.9
NUP88-204ENST00000572290 LINC00116Q8NCU8 138 aa26.94■■□□□ 1.9
NUP88-204ENST00000572290 SGIP1Q9BQI5 828 aa26.94■■□□□ 1.9
NUP88-204ENST00000572290 SLC52A2Q9HAB3 445 aa26.94■■□□□ 1.9
NUP88-204ENST00000572290 RALBP1Q15311 655 aa26.93■■□□□ 1.9
NUP88-204ENST00000572290 FLAD1Q8NFF5 587 aa26.93■■□□□ 1.9
NUP88-204ENST00000572290 FCHSD2O94868 740 aa26.91■■□□□ 1.9
NUP88-204ENST00000572290 SLC4A9Q96Q91 983 aa26.91■■□□□ 1.9
NUP88-204ENST00000572290 C5P01031 1676 aa26.91■■□□□ 1.9
NUP88-204ENST00000572290 PHACTR3Q96KR7 559 aa26.9■■□□□ 1.9
NUP88-204ENST00000572290 MAP3K5Q99683 1374 aa26.89■■□□□ 1.9
NUP88-204ENST00000572290 GNAT3A8MTJ3 354 aa26.89■■□□□ 1.9
NUP88-204ENST00000572290 PTCD1O75127 700 aaKnown RBP26.89■■□□□ 1.9
NUP88-204ENST00000572290 QSER1Q2KHR3 1735 aa26.88■■□□□ 1.89
NUP88-204ENST00000572290 ARXQ96QS3 562 aa26.88■■□□□ 1.89
NUP88-204ENST00000572290 C4BP0C0L5 1744 aa26.87■■□□□ 1.89
NUP88-204ENST00000572290 POLD1P28340 1107 aa26.87■■□□□ 1.89
NUP88-204ENST00000572290 GNPATO15228 680 aa26.86■■□□□ 1.89
NUP88-204ENST00000572290 PHF14O94880 888 aa26.86■■□□□ 1.89
NUP88-204ENST00000572290 SSFA2P28290 1259 aa26.86■■□□□ 1.89
NUP88-204ENST00000572290 AMIGO3Q86WK7 504 aa26.86■■□□□ 1.89
NUP88-204ENST00000572290 MRC1P22897 1456 aa26.86■■□□□ 1.89
NUP88-204ENST00000572290 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.85■■□□□ 1.89
NUP88-204ENST00000572290 IL17REQ8NFR9 667 aa26.85■■□□□ 1.89
NUP88-204ENST00000572290 SMIM5Q71RC9 77 aa26.84■■□□□ 1.89
NUP88-204ENST00000572290 SLC39A6Q13433 755 aa26.83■■□□□ 1.89
NUP88-204ENST00000572290 FHDC1Q9C0D6 1143 aaPredicted RBP26.83■■□□□ 1.89
NUP88-204ENST00000572290 SCN11AQ9UI33 1791 aa26.82■■□□□ 1.88
NUP88-204ENST00000572290 TAF1LQ8IZX4 1826 aa26.82■■□□□ 1.88
NUP88-204ENST00000572290 TUBGCP6Q96RT7 1819 aa26.82■■□□□ 1.88
NUP88-204ENST00000572290 TEFQ10587 303 aa26.82■■□□□ 1.88
NUP88-204ENST00000572290 RC3H1Q5TC82 1133 aaKnown RBP26.82■■□□□ 1.88
NUP88-204ENST00000572290 MSL1Q68DK7 614 aa26.81■■□□□ 1.88
NUP88-204ENST00000572290 MYBBP1AQ9BQG0 1328 aaKnown RBP26.81■■□□□ 1.88
NUP88-204ENST00000572290 CNTNAP4Q9C0A0 1308 aa26.81■■□□□ 1.88
NUP88-204ENST00000572290 ADAMTS7Q9UKP4 1686 aa26.8■■□□□ 1.88
NUP88-204ENST00000572290 RTCBQ9Y3I0 505 aaKnown RBP26.8■■□□□ 1.88
NUP88-204ENST00000572290 NEFMP07197 916 aa26.79■■□□□ 1.88
NUP88-204ENST00000572290 SYT17Q9BSW7 474 aa26.79■■□□□ 1.88
NUP88-204ENST00000572290 RTF1Q92541 710 aaKnown RBP26.78■■□□□ 1.88
NUP88-204ENST00000572290 ZNF831Q5JPB2 1677 aa26.78■■□□□ 1.88
NUP88-204ENST00000572290 CEMIPQ8WUJ3 1361 aa26.77■■□□□ 1.88
NUP88-204ENST00000572290 TRAPPC3LQ5T215 181 aa26.77■■□□□ 1.88
NUP88-204ENST00000572290 TTC5Q8N0Z6 440 aa26.77■■□□□ 1.88
NUP88-204ENST00000572290 RPS6KA4O75676 772 aa26.76■■□□□ 1.87
NUP88-204ENST00000572290 DNAJC10Q8IXB1 793 aa26.76■■□□□ 1.87
NUP88-204ENST00000572290 PNNQ9H307 717 aaKnown RBP26.76■■□□□ 1.87
NUP88-204ENST00000572290 ADRA2BP18089 450 aa26.75■■□□□ 1.87
NUP88-204ENST00000572290 CRKLP46109 303 aaKnown RBP26.75■■□□□ 1.87
NUP88-204ENST00000572290 HTATSF1O43719 755 aaKnown RBP26.74■■□□□ 1.87
NUP88-204ENST00000572290 VSIG10Q8N0Z9 540 aa26.74■■□□□ 1.87
NUP88-204ENST00000572290 KLHL34Q8N239 644 aa26.74■■□□□ 1.87
NUP88-204ENST00000572290 PLEKHF1Q96S99 279 aa26.74■■□□□ 1.87
NUP88-204ENST00000572290 DCAF8L1A6NGE4 600 aa26.73■■□□□ 1.87
NUP88-204ENST00000572290 PRKRIP1Q9H875 184 aaPredicted RBP26.73■■□□□ 1.87
NUP88-204ENST00000572290 KCPQ6ZWJ8 1503 aa26.72■■□□□ 1.87
NUP88-204ENST00000572290 ZNF790Q6PG37 636 aa26.72■■□□□ 1.87
NUP88-204ENST00000572290 MCM10Q7L590 875 aa26.72■■□□□ 1.87
NUP88-204ENST00000572290 ARHGEF1Q92888 912 aaKnown RBP26.72■■□□□ 1.87
NUP88-204ENST00000572290 UBR3Q6ZT12 1888 aa26.71■■□□□ 1.87
NUP88-204ENST00000572290 COL24A1Q17RW2 1714 aa26.7■■□□□ 1.87
NUP88-204ENST00000572290 MAPK8IP3Q9UPT6 1336 aa26.7■■□□□ 1.87
NUP88-204ENST00000572290 ZNF316A6NFI3 1004 aaPredicted RBP26.7■■□□□ 1.86
NUP88-204ENST00000572290 BTBD11A6QL63 1104 aa26.7■■□□□ 1.86
NUP88-204ENST00000572290 INTS5Q6P9B9 1019 aaKnown RBP26.7■■□□□ 1.86
NUP88-204ENST00000572290 CYP19A1P11511 503 aaPredicted RBP26.69■■□□□ 1.86
NUP88-204ENST00000572290 RFC4P35249 363 aa26.69■■□□□ 1.86
NUP88-204ENST00000572290 DCTN1Q14203 1278 aa26.69■■□□□ 1.86
NUP88-204ENST00000572290 ZNF496Q96IT1 587 aaPredicted RBP26.69■■□□□ 1.86
NUP88-204ENST00000572290 CCDC87Q9NVE4 849 aa26.69■■□□□ 1.86
NUP88-204ENST00000572290 NFE2L2Q16236 605 aa26.68■■□□□ 1.86
NUP88-204ENST00000572290 CICQ96RK0 1608 aaPredicted RBP26.68■■□□□ 1.86
NUP88-204ENST00000572290 COL5A3P25940 1745 aaPredicted RBP26.68■■□□□ 1.86
NUP88-204ENST00000572290 TJP1Q07157 1748 aa26.67■■□□□ 1.86
NUP88-204ENST00000572290 FMNL2Q96PY5 1086 aa26.66■■□□□ 1.86
NUP88-204ENST00000572290 HEG1Q9ULI3 1381 aa26.66■■□□□ 1.86
NUP88-204ENST00000572290 NLGN1Q8N2Q7 840 aa26.65■■□□□ 1.86
NUP88-204ENST00000572290 KCNQ3O43525 872 aa26.64■■□□□ 1.86
NUP88-204ENST00000572290 STARD3NLO95772 234 aa26.64■■□□□ 1.86
NUP88-204ENST00000572290 TEX13AQ9BXU3 409 aaPredicted RBP26.64■■□□□ 1.86
NUP88-204ENST00000572290 GYS1P13807 737 aa26.63■■□□□ 1.85
NUP88-204ENST00000572290 WDR43Q15061 677 aaKnown RBP eCLIP26.63■■□□□ 1.85
NUP88-204ENST00000572290 ZBTB1Q9Y2K1 713 aa26.63■■□□□ 1.85
NUP88-204ENST00000572290 SOS1Q07889 1333 aaPredicted RBP26.63■■□□□ 1.85
NUP88-204ENST00000572290 MMP10P09238 476 aa26.62■■□□□ 1.85
NUP88-204ENST00000572290 TAF7Q15545 349 aaPredicted RBP26.62■■□□□ 1.85
NUP88-204ENST00000572290 NLGN2Q8NFZ4 835 aa26.62■■□□□ 1.85
NUP88-204ENST00000572290 CD2APQ9Y5K6 639 aa26.61■■□□□ 1.85
NUP88-204ENST00000572290 SRP68Q9UHB9 627 aaKnown RBP26.6■■□□□ 1.85
NUP88-204ENST00000572290 USP42Q9H9J4 1324 aaKnown RBP26.6■■□□□ 1.85
NUP88-204ENST00000572290 CANXP27824 592 aaKnown RBP26.59■■□□□ 1.85
NUP88-204ENST00000572290 VIRMAQ69YN4 1812 aaKnown RBP26.59■■□□□ 1.85
NUP88-204ENST00000572290 SIPA1L3O60292 1781 aaPredicted RBP26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms