RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 PRKAR2BP31323 418 aa13.74□□□□□ -0.21
GTF3C1-213ENST00000571886 U2AF1Q01081 240 aaKnown RBP eCLIP13.74□□□□□ -0.21
GTF3C1-213ENST00000571886 ITPK1Q13572 414 aa13.74□□□□□ -0.21
GTF3C1-213ENST00000571886 SPON1Q9HCB6 807 aa13.74□□□□□ -0.21
GTF3C1-213ENST00000571886 QSER1Q2KHR3 1735 aa13.73□□□□□ -0.21
GTF3C1-213ENST00000571886 PTGER2P43116 358 aa13.73□□□□□ -0.21
GTF3C1-213ENST00000571886 LINC00116Q8NCU8 138 aa13.73□□□□□ -0.21
GTF3C1-213ENST00000571886 TFCP2L1Q9NZI6 479 aa13.73□□□□□ -0.21
GTF3C1-213ENST00000571886 NUDCQ9Y266 331 aa13.73□□□□□ -0.21
GTF3C1-213ENST00000571886 COL23A1Q86Y22 540 aaPredicted RBP13.72□□□□□ -0.21
GTF3C1-213ENST00000571886 C4BP0C0L5 1744 aa13.71□□□□□ -0.21
GTF3C1-213ENST00000571886 ATP6V1AP38606 617 aa13.71□□□□□ -0.21
GTF3C1-213ENST00000571886 SLC39A6Q13433 755 aa13.71□□□□□ -0.21
GTF3C1-213ENST00000571886 RALBP1Q15311 655 aa13.71□□□□□ -0.21
GTF3C1-213ENST00000571886 IL17REQ8NFR9 667 aa13.71□□□□□ -0.21
GTF3C1-213ENST00000571886 SGIP1Q9BQI5 828 aa13.71□□□□□ -0.21
GTF3C1-213ENST00000571886 RBM42Q9BTD8 480 aaKnown RBP13.71□□□□□ -0.21
GTF3C1-213ENST00000571886 SLC52A2Q9HAB3 445 aa13.71□□□□□ -0.21
GTF3C1-213ENST00000571886 ADAMTS7Q9UKP4 1686 aa13.71□□□□□ -0.21
GTF3C1-213ENST00000571886 PTCD1O75127 700 aaKnown RBP13.69□□□□□ -0.22
GTF3C1-213ENST00000571886 FCHSD2O94868 740 aa13.69□□□□□ -0.22
GTF3C1-213ENST00000571886 GAS2L2Q8NHY3 880 aa13.69□□□□□ -0.22
GTF3C1-213ENST00000571886 MTFR1LQ9H019 292 aa13.69□□□□□ -0.22
GTF3C1-213ENST00000571886 UBR3Q6ZT12 1888 aa13.69□□□□□ -0.22
GTF3C1-213ENST00000571886 MYH14Q7Z406 1995 aaKnown RBP13.69□□□□□ -0.22
GTF3C1-213ENST00000571886 GNAT3A8MTJ3 354 aa13.68□□□□□ -0.22
GTF3C1-213ENST00000571886 MAP3K5Q99683 1374 aa13.68□□□□□ -0.22
GTF3C1-213ENST00000571886 MRC1P22897 1456 aa13.67□□□□□ -0.22
GTF3C1-213ENST00000571886 ZNF316A6NFI3 1004 aaPredicted RBP13.67□□□□□ -0.22
GTF3C1-213ENST00000571886 MSH5O43196 834 aa13.67□□□□□ -0.22
GTF3C1-213ENST00000571886 PHF14O94880 888 aa13.67□□□□□ -0.22
GTF3C1-213ENST00000571886 AK7Q96M32 723 aa13.67□□□□□ -0.22
GTF3C1-213ENST00000571886 PLEKHF1Q96S99 279 aa13.67□□□□□ -0.22
GTF3C1-213ENST00000571886 PPP1R1BQ9UD71 204 aaPredicted RBP13.67□□□□□ -0.22
GTF3C1-213ENST00000571886 COL24A1Q17RW2 1714 aa13.67□□□□□ -0.22
GTF3C1-213ENST00000571886 MYBBP1AQ9BQG0 1328 aaKnown RBP13.66□□□□□ -0.22
GTF3C1-213ENST00000571886 ZNF831Q5JPB2 1677 aa13.66□□□□□ -0.22
GTF3C1-213ENST00000571886 DCTN1Q14203 1278 aa13.66□□□□□ -0.22
GTF3C1-213ENST00000571886 MSL1Q68DK7 614 aa13.66□□□□□ -0.22
GTF3C1-213ENST00000571886 SLC16A10Q8TF71 515 aa13.66□□□□□ -0.22
GTF3C1-213ENST00000571886 PRKRIP1Q9H875 184 aaPredicted RBP13.66□□□□□ -0.22
GTF3C1-213ENST00000571886 COL5A3P25940 1745 aaPredicted RBP13.66□□□□□ -0.22
GTF3C1-213ENST00000571886 SIPA1L3O60292 1781 aaPredicted RBP13.66□□□□□ -0.22
GTF3C1-213ENST00000571886 TJP1Q07157 1748 aa13.65□□□□□ -0.22
GTF3C1-213ENST00000571886 DLG5Q8TDM6 1919 aa13.65□□□□□ -0.22
GTF3C1-213ENST00000571886 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.65□□□□□ -0.22
GTF3C1-213ENST00000571886 KCNQ3O43525 872 aa13.65□□□□□ -0.22
GTF3C1-213ENST00000571886 MCM10Q7L590 875 aa13.65□□□□□ -0.22
GTF3C1-213ENST00000571886 CEMIPQ8WUJ3 1361 aa13.64□□□□□ -0.23
GTF3C1-213ENST00000571886 GNPATO15228 680 aa13.64□□□□□ -0.23
GTF3C1-213ENST00000571886 DNAJC10Q8IXB1 793 aa13.64□□□□□ -0.23
GTF3C1-213ENST00000571886 KCPQ6ZWJ8 1503 aa13.64□□□□□ -0.23
GTF3C1-213ENST00000571886 ARXQ96QS3 562 aa13.63□□□□□ -0.23
GTF3C1-213ENST00000571886 FHDC1Q9C0D6 1143 aaPredicted RBP13.63□□□□□ -0.23
GTF3C1-213ENST00000571886 HMGB2P26583 209 aaKnown RBP13.62□□□□□ -0.23
GTF3C1-213ENST00000571886 SSFA2P28290 1259 aa13.62□□□□□ -0.23
GTF3C1-213ENST00000571886 CRKLP46109 303 aaKnown RBP13.62□□□□□ -0.23
GTF3C1-213ENST00000571886 TEFQ10587 303 aa13.62□□□□□ -0.23
GTF3C1-213ENST00000571886 RC3H1Q5TC82 1133 aaKnown RBP13.62□□□□□ -0.23
GTF3C1-213ENST00000571886 INTS5Q6P9B9 1019 aaKnown RBP13.62□□□□□ -0.23
GTF3C1-213ENST00000571886 FLAD1Q8NFF5 587 aa13.62□□□□□ -0.23
GTF3C1-213ENST00000571886 UBR2Q8IWV8 1755 aa13.62□□□□□ -0.23
GTF3C1-213ENST00000571886 CNTNAP4Q9C0A0 1308 aa13.62□□□□□ -0.23
GTF3C1-213ENST00000571886 RPS6KA4O75676 772 aa13.61□□□□□ -0.23
GTF3C1-213ENST00000571886 CCDC184Q52MB2 194 aa13.61□□□□□ -0.23
GTF3C1-213ENST00000571886 ARHGEF1Q92888 912 aaKnown RBP13.61□□□□□ -0.23
GTF3C1-213ENST00000571886 ZNF496Q96IT1 587 aaPredicted RBP13.61□□□□□ -0.23
GTF3C1-213ENST00000571886 SYT17Q9BSW7 474 aa13.61□□□□□ -0.23
GTF3C1-213ENST00000571886 CYP19A1P11511 503 aaPredicted RBP13.6□□□□□ -0.23
GTF3C1-213ENST00000571886 ZNF790Q6PG37 636 aa13.6□□□□□ -0.23
GTF3C1-213ENST00000571886 THUMPD2Q9BTF0 503 aaKnown RBP13.6□□□□□ -0.23
GTF3C1-213ENST00000571886 RTCBQ9Y3I0 505 aaKnown RBP13.6□□□□□ -0.23
GTF3C1-213ENST00000571886 CICQ96RK0 1608 aaPredicted RBP13.6□□□□□ -0.23
GTF3C1-213ENST00000571886 BTBD11A6QL63 1104 aa13.59□□□□□ -0.23
GTF3C1-213ENST00000571886 NFE2L2Q16236 605 aa13.59□□□□□ -0.23
GTF3C1-213ENST00000571886 TRAPPC3LQ5T215 181 aa13.59□□□□□ -0.23
GTF3C1-213ENST00000571886 CCDC146Q8IYE0 955 aa13.59□□□□□ -0.23
GTF3C1-213ENST00000571886 RTF1Q92541 710 aaKnown RBP13.59□□□□□ -0.23
GTF3C1-213ENST00000571886 MIS18AQ9NYP9 233 aa13.59□□□□□ -0.23
GTF3C1-213ENST00000571886 ADAMTS8Q9UP79 889 aa13.59□□□□□ -0.23
GTF3C1-213ENST00000571886 HTATSF1O43719 755 aaKnown RBP13.58□□□□□ -0.24
GTF3C1-213ENST00000571886 POLD1P28340 1107 aa13.58□□□□□ -0.24
GTF3C1-213ENST00000571886 C4AP0C0L4 1744 aa13.57□□□□□ -0.24
GTF3C1-213ENST00000571886 PRAMEF22A3QJZ6 481 aa13.57□□□□□ -0.24
GTF3C1-213ENST00000571886 TTC5Q8N0Z6 440 aa13.57□□□□□ -0.24
GTF3C1-213ENST00000571886 VSIG10Q8N0Z9 540 aa13.57□□□□□ -0.24
GTF3C1-213ENST00000571886 KLHL34Q8N239 644 aa13.57□□□□□ -0.24
GTF3C1-213ENST00000571886 SRP68Q9UHB9 627 aaKnown RBP13.57□□□□□ -0.24
GTF3C1-213ENST00000571886 ZBTB1Q9Y2K1 713 aa13.57□□□□□ -0.24
GTF3C1-213ENST00000571886 HEG1Q9ULI3 1381 aa13.57□□□□□ -0.24
GTF3C1-213ENST00000571886 NEFMP07197 916 aa13.56□□□□□ -0.24
GTF3C1-213ENST00000571886 NLGN2Q8NFZ4 835 aa13.56□□□□□ -0.24
GTF3C1-213ENST00000571886 CCDC87Q9NVE4 849 aa13.56□□□□□ -0.24
GTF3C1-213ENST00000571886 RRP7AQ9Y3A4 280 aaKnown RBP13.56□□□□□ -0.24
GTF3C1-213ENST00000571886 GYS1P13807 737 aa13.55□□□□□ -0.24
GTF3C1-213ENST00000571886 RFC4P35249 363 aa13.55□□□□□ -0.24
GTF3C1-213ENST00000571886 TMPOP42166 694 aaKnown RBP13.55□□□□□ -0.24
GTF3C1-213ENST00000571886 RIPK4P57078 832 aa13.55□□□□□ -0.24
GTF3C1-213ENST00000571886 TAF7Q15545 349 aaPredicted RBP13.55□□□□□ -0.24
GTF3C1-213ENST00000571886 FMNL2Q96PY5 1086 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms