RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 LOC102724428A0A0B4J2F2 783 aa11.54□□□□□ -0.56
TRAPPC1-203ENST00000571739 SIK1P57059 783 aa11.54□□□□□ -0.56
TRAPPC1-203ENST00000571739 SLC39A6Q13433 755 aa11.54□□□□□ -0.56
TRAPPC1-203ENST00000571739 ITPK1Q13572 414 aa11.54□□□□□ -0.56
TRAPPC1-203ENST00000571739 ZNF827Q17R98 1081 aa11.54□□□□□ -0.56
TRAPPC1-203ENST00000571739 MCM10Q7L590 875 aa11.54□□□□□ -0.56
TRAPPC1-203ENST00000571739 CCDC146Q8IYE0 955 aa11.54□□□□□ -0.56
TRAPPC1-203ENST00000571739 PNISRQ8TF01 805 aaKnown RBP11.54□□□□□ -0.56
TRAPPC1-203ENST00000571739 SCN11AQ9UI33 1791 aa11.54□□□□□ -0.56
TRAPPC1-203ENST00000571739 CEMIPQ8WUJ3 1361 aa11.54□□□□□ -0.56
TRAPPC1-203ENST00000571739 LY75O60449 1722 aa11.53□□□□□ -0.56
TRAPPC1-203ENST00000571739 HTATSF1O43719 755 aaKnown RBP11.53□□□□□ -0.56
TRAPPC1-203ENST00000571739 ATP6V1AP38606 617 aa11.53□□□□□ -0.56
TRAPPC1-203ENST00000571739 WDR43Q15061 677 aaKnown RBP eCLIP11.53□□□□□ -0.56
TRAPPC1-203ENST00000571739 NFE2L2Q16236 605 aa11.53□□□□□ -0.56
TRAPPC1-203ENST00000571739 RBM42Q9BTD8 480 aaKnown RBP11.53□□□□□ -0.56
TRAPPC1-203ENST00000571739 STK32BQ9NY57 414 aa11.53□□□□□ -0.56
TRAPPC1-203ENST00000571739 ADAMTS7Q9UKP4 1686 aa11.52□□□□□ -0.56
TRAPPC1-203ENST00000571739 KCNQ3O43525 872 aa11.52□□□□□ -0.57
TRAPPC1-203ENST00000571739 PTCD1O75127 700 aaKnown RBP11.52□□□□□ -0.57
TRAPPC1-203ENST00000571739 NEFMP07197 916 aa11.52□□□□□ -0.57
TRAPPC1-203ENST00000571739 TMPOP42166 694 aaKnown RBP11.52□□□□□ -0.57
TRAPPC1-203ENST00000571739 RUNDC1Q96C34 613 aa11.52□□□□□ -0.57
TRAPPC1-203ENST00000571739 RIPK4P57078 832 aa11.51□□□□□ -0.57
TRAPPC1-203ENST00000571739 SMIM5Q71RC9 77 aa11.51□□□□□ -0.57
TRAPPC1-203ENST00000571739 LINC00116Q8NCU8 138 aa11.51□□□□□ -0.57
TRAPPC1-203ENST00000571739 RTF1Q92541 710 aaKnown RBP11.51□□□□□ -0.57
TRAPPC1-203ENST00000571739 THUMPD2Q9BTF0 503 aaKnown RBP11.51□□□□□ -0.57
TRAPPC1-203ENST00000571739 RRP7AQ9Y3A4 280 aaKnown RBP11.51□□□□□ -0.57
TRAPPC1-203ENST00000571739 TEFQ10587 303 aa11.5□□□□□ -0.57
TRAPPC1-203ENST00000571739 AMIGO3Q86WK7 504 aa11.5□□□□□ -0.57
TRAPPC1-203ENST00000571739 MRS2Q9HD23 443 aa11.5□□□□□ -0.57
TRAPPC1-203ENST00000571739 MAPK8IP3Q9UPT6 1336 aa11.5□□□□□ -0.57
TRAPPC1-203ENST00000571739 MRC1P22897 1456 aa11.5□□□□□ -0.57
TRAPPC1-203ENST00000571739 PAPPAQ13219 1627 aa11.49□□□□□ -0.57
TRAPPC1-203ENST00000571739 VIRMAQ69YN4 1812 aaKnown RBP11.49□□□□□ -0.57
TRAPPC1-203ENST00000571739 BTBD11A6QL63 1104 aa11.49□□□□□ -0.57
TRAPPC1-203ENST00000571739 TAF7Q15545 349 aaPredicted RBP11.49□□□□□ -0.57
TRAPPC1-203ENST00000571739 NEUROD2Q15784 382 aa11.49□□□□□ -0.57
TRAPPC1-203ENST00000571739 ZNF790Q6PG37 636 aa11.49□□□□□ -0.57
TRAPPC1-203ENST00000571739 MIS18AQ9NYP9 233 aa11.49□□□□□ -0.57
TRAPPC1-203ENST00000571739 TFCP2L1Q9NZI6 479 aa11.49□□□□□ -0.57
TRAPPC1-203ENST00000571739 TRIM35Q9UPQ4 493 aa11.49□□□□□ -0.57
TRAPPC1-203ENST00000571739 PNPLA7Q6ZV29 1317 aa11.49□□□□□ -0.57
TRAPPC1-203ENST00000571739 APAF1O14727 1248 aa11.48□□□□□ -0.57
TRAPPC1-203ENST00000571739 COL23A1Q86Y22 540 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC1-203ENST00000571739 ZNF496Q96IT1 587 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC1-203ENST00000571739 DLG5Q8TDM6 1919 aa11.47□□□□□ -0.57
TRAPPC1-203ENST00000571739 DNAJC10Q8IXB1 793 aa11.47□□□□□ -0.57
TRAPPC1-203ENST00000571739 TAF1LQ8IZX4 1826 aa11.46□□□□□ -0.57
TRAPPC1-203ENST00000571739 SENP3-EIF4A1A0A087X0R7 540 aa11.46□□□□□ -0.57
TRAPPC1-203ENST00000571739 ZBTB7AO95365 584 aa11.46□□□□□ -0.57
TRAPPC1-203ENST00000571739 HMGB2P26583 209 aaKnown RBP11.46□□□□□ -0.57
TRAPPC1-203ENST00000571739 RC3H1Q5TC82 1133 aaKnown RBP11.46□□□□□ -0.57
TRAPPC1-203ENST00000571739 INTS5Q6P9B9 1019 aaKnown RBP11.46□□□□□ -0.57
TRAPPC1-203ENST00000571739 CYP19A1P11511 503 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC1-203ENST00000571739 TTC5Q8N0Z6 440 aa11.45□□□□□ -0.58
TRAPPC1-203ENST00000571739 VSIG10Q8N0Z9 540 aa11.45□□□□□ -0.58
TRAPPC1-203ENST00000571739 AK7Q96M32 723 aa11.45□□□□□ -0.58
TRAPPC1-203ENST00000571739 ATF5Q9Y2D1 282 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC1-203ENST00000571739 USP16Q9Y5T5 823 aa11.45□□□□□ -0.58
TRAPPC1-203ENST00000571739 SIPA1L3O60292 1781 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC1-203ENST00000571739 KCPQ6ZWJ8 1503 aa11.45□□□□□ -0.58
TRAPPC1-203ENST00000571739 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.44□□□□□ -0.58
TRAPPC1-203ENST00000571739 PRAMEF22A3QJZ6 481 aa11.44□□□□□ -0.58
TRAPPC1-203ENST00000571739 RPS6KA4O75676 772 aa11.44□□□□□ -0.58
TRAPPC1-203ENST00000571739 PTGER2P43116 358 aa11.44□□□□□ -0.58
TRAPPC1-203ENST00000571739 CRKLP46109 303 aaKnown RBP11.44□□□□□ -0.58
TRAPPC1-203ENST00000571739 DIEXFQ68CQ4 756 aaKnown RBP11.44□□□□□ -0.58
TRAPPC1-203ENST00000571739 FAM9BQ8IZU0 186 aa11.44□□□□□ -0.58
TRAPPC1-203ENST00000571739 C4BP0C0L5 1744 aa11.43□□□□□ -0.58
TRAPPC1-203ENST00000571739 HEG1Q9ULI3 1381 aa11.43□□□□□ -0.58
TRAPPC1-203ENST00000571739 C5P01031 1676 aa11.43□□□□□ -0.58
TRAPPC1-203ENST00000571739 ZNF831Q5JPB2 1677 aa11.43□□□□□ -0.58
TRAPPC1-203ENST00000571739 MYH14Q7Z406 1995 aaKnown RBP11.43□□□□□ -0.58
TRAPPC1-203ENST00000571739 CNTNAP4Q9C0A0 1308 aa11.43□□□□□ -0.58
TRAPPC1-203ENST00000571739 GNPATO15228 680 aa11.43□□□□□ -0.58
TRAPPC1-203ENST00000571739 PHF14O94880 888 aa11.43□□□□□ -0.58
TRAPPC1-203ENST00000571739 EIF4A1P60842 406 aaKnown RBP11.43□□□□□ -0.58
TRAPPC1-203ENST00000571739 SLC16A10Q8TF71 515 aa11.43□□□□□ -0.58
TRAPPC1-203ENST00000571739 ARHGEF1Q92888 912 aaKnown RBP11.43□□□□□ -0.58
TRAPPC1-203ENST00000571739 FMNL2Q96PY5 1086 aa11.43□□□□□ -0.58
TRAPPC1-203ENST00000571739 SGIP1Q9BQI5 828 aa11.43□□□□□ -0.58
TRAPPC1-203ENST00000571739 SPON1Q9HCB6 807 aa11.43□□□□□ -0.58
TRAPPC1-203ENST00000571739 CASZ1Q86V15 1759 aa11.43□□□□□ -0.58
TRAPPC1-203ENST00000571739 CHL1O00533 1208 aa11.42□□□□□ -0.58
TRAPPC1-203ENST00000571739 SSFA2P28290 1259 aa11.42□□□□□ -0.58
TRAPPC1-203ENST00000571739 LMOD3Q0VAK6 560 aa11.42□□□□□ -0.58
TRAPPC1-203ENST00000571739 TRAPPC3LQ5T215 181 aa11.42□□□□□ -0.58
TRAPPC1-203ENST00000571739 MIER1Q8N108 512 aa11.42□□□□□ -0.58
TRAPPC1-203ENST00000571739 FLAD1Q8NFF5 587 aa11.42□□□□□ -0.58
TRAPPC1-203ENST00000571739 MTFR1LQ9H019 292 aa11.42□□□□□ -0.58
TRAPPC1-203ENST00000571739 RTCBQ9Y3I0 505 aaKnown RBP11.42□□□□□ -0.58
TRAPPC1-203ENST00000571739 TUBGCP6Q96RT7 1819 aa11.42□□□□□ -0.58
TRAPPC1-203ENST00000571739 CCER2I3L3R5 266 aa11.41□□□□□ -0.58
TRAPPC1-203ENST00000571739 MSH5O43196 834 aa11.41□□□□□ -0.58
TRAPPC1-203ENST00000571739 A1BGP04217 495 aa11.41□□□□□ -0.58
TRAPPC1-203ENST00000571739 SNRPA1P09661 255 aaKnown RBP11.41□□□□□ -0.58
TRAPPC1-203ENST00000571739 TEX13AQ9BXU3 409 aaPredicted RBP11.41□□□□□ -0.58
TRAPPC1-203ENST00000571739 CCDC87Q9NVE4 849 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms