RNA–Protein interactions for RNA: ENST00000571627.5

LITAF-208, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-208ENST00000571627 ADAMTS7Q9UKP4 1686 aa19.54■□□□□ 0.72
LITAF-208ENST00000571627 COL24A1Q17RW2 1714 aa19.54■□□□□ 0.72
LITAF-208ENST00000571627 ITPK1Q13572 414 aa19.53■□□□□ 0.72
LITAF-208ENST00000571627 NFATC2IPQ8NCF5 419 aa19.53■□□□□ 0.72
LITAF-208ENST00000571627 LGR6Q9HBX8 967 aa19.53■□□□□ 0.72
LITAF-208ENST00000571627 COL5A3P25940 1745 aaPredicted RBP19.53■□□□□ 0.72
LITAF-208ENST00000571627 ZNF831Q5JPB2 1677 aa19.52■□□□□ 0.72
LITAF-208ENST00000571627 MSH5O43196 834 aa19.52■□□□□ 0.72
LITAF-208ENST00000571627 ATP6V1AP38606 617 aa19.52■□□□□ 0.72
LITAF-208ENST00000571627 AMIGO3Q86WK7 504 aa19.52■□□□□ 0.72
LITAF-208ENST00000571627 COL23A1Q86Y22 540 aaPredicted RBP19.52■□□□□ 0.72
LITAF-208ENST00000571627 SGIP1Q9BQI5 828 aa19.52■□□□□ 0.72
LITAF-208ENST00000571627 RBM42Q9BTD8 480 aaKnown RBP19.52■□□□□ 0.72
LITAF-208ENST00000571627 MRC1P22897 1456 aa19.52■□□□□ 0.72
LITAF-208ENST00000571627 SMIM5Q71RC9 77 aa19.51■□□□□ 0.71
LITAF-208ENST00000571627 AK7Q96M32 723 aa19.51■□□□□ 0.71
LITAF-208ENST00000571627 SLC4A9Q96Q91 983 aa19.51■□□□□ 0.71
LITAF-208ENST00000571627 RNMTO43148 476 aaKnown RBP19.5■□□□□ 0.71
LITAF-208ENST00000571627 PRKAR2BP31323 418 aa19.5■□□□□ 0.71
LITAF-208ENST00000571627 RSPH6AQ9H0K4 717 aa19.5■□□□□ 0.71
LITAF-208ENST00000571627 NUDCQ9Y266 331 aa19.5■□□□□ 0.71
LITAF-208ENST00000571627 TJP1Q07157 1748 aa19.49■□□□□ 0.71
LITAF-208ENST00000571627 U2AF1L5P0DN76 240 aaPredicted RBP19.49■□□□□ 0.71
LITAF-208ENST00000571627 U2AF1Q01081 240 aaKnown RBP eCLIP19.49■□□□□ 0.71
LITAF-208ENST00000571627 SLC16A10Q8TF71 515 aa19.49■□□□□ 0.71
LITAF-208ENST00000571627 PTCD1O75127 700 aaKnown RBP19.48■□□□□ 0.71
LITAF-208ENST00000571627 PHF14O94880 888 aa19.48■□□□□ 0.71
LITAF-208ENST00000571627 PHACTR3Q96KR7 559 aa19.48■□□□□ 0.71
LITAF-208ENST00000571627 SLC52A2Q9HAB3 445 aa19.48■□□□□ 0.71
LITAF-208ENST00000571627 MAP3K5Q99683 1374 aa19.47■□□□□ 0.71
LITAF-208ENST00000571627 MYH14Q7Z406 1995 aaKnown RBP19.47■□□□□ 0.71
LITAF-208ENST00000571627 MSL1Q68DK7 614 aa19.47■□□□□ 0.71
LITAF-208ENST00000571627 SIPA1L3O60292 1781 aaPredicted RBP19.47■□□□□ 0.71
LITAF-208ENST00000571627 HMGB2P26583 209 aaKnown RBP19.46■□□□□ 0.71
LITAF-208ENST00000571627 GAS2L2Q8NHY3 880 aa19.46■□□□□ 0.71
LITAF-208ENST00000571627 ARXQ96QS3 562 aa19.46■□□□□ 0.71
LITAF-208ENST00000571627 FHDC1Q9C0D6 1143 aaPredicted RBP19.46■□□□□ 0.71
LITAF-208ENST00000571627 CICQ96RK0 1608 aaPredicted RBP19.46■□□□□ 0.71
LITAF-208ENST00000571627 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.45■□□□□ 0.7
LITAF-208ENST00000571627 GNPATO15228 680 aa19.45■□□□□ 0.7
LITAF-208ENST00000571627 SLC39A6Q13433 755 aa19.44■□□□□ 0.7
LITAF-208ENST00000571627 FLAD1Q8NFF5 587 aa19.44■□□□□ 0.7
LITAF-208ENST00000571627 UBR2Q8IWV8 1755 aa19.44■□□□□ 0.7
LITAF-208ENST00000571627 KCPQ6ZWJ8 1503 aa19.43■□□□□ 0.7
LITAF-208ENST00000571627 GNAT3A8MTJ3 354 aa19.43■□□□□ 0.7
LITAF-208ENST00000571627 POLD1P28340 1107 aa19.43■□□□□ 0.7
LITAF-208ENST00000571627 FCHSD2O94868 740 aa19.42■□□□□ 0.7
LITAF-208ENST00000571627 SSFA2P28290 1259 aa19.42■□□□□ 0.7
LITAF-208ENST00000571627 RALBP1Q15311 655 aa19.42■□□□□ 0.7
LITAF-208ENST00000571627 IL17REQ8NFR9 667 aa19.42■□□□□ 0.7
LITAF-208ENST00000571627 DLG5Q8TDM6 1919 aa19.42■□□□□ 0.7
LITAF-208ENST00000571627 C4AP0C0L4 1744 aa19.42■□□□□ 0.7
LITAF-208ENST00000571627 KLHL34Q8N239 644 aa19.41■□□□□ 0.7
LITAF-208ENST00000571627 SYT17Q9BSW7 474 aa19.41■□□□□ 0.7
LITAF-208ENST00000571627 CNTNAP4Q9C0A0 1308 aa19.4■□□□□ 0.7
LITAF-208ENST00000571627 TEFQ10587 303 aa19.39■□□□□ 0.69
LITAF-208ENST00000571627 RTCBQ9Y3I0 505 aaKnown RBP19.39■□□□□ 0.69
LITAF-208ENST00000571627 ZNF316A6NFI3 1004 aaPredicted RBP19.38■□□□□ 0.69
LITAF-208ENST00000571627 CRKLP46109 303 aaKnown RBP19.38■□□□□ 0.69
LITAF-208ENST00000571627 RC3H1Q5TC82 1133 aaKnown RBP19.38■□□□□ 0.69
LITAF-208ENST00000571627 DNAJC10Q8IXB1 793 aa19.38■□□□□ 0.69
LITAF-208ENST00000571627 CEMIPQ8WUJ3 1361 aa19.38■□□□□ 0.69
LITAF-208ENST00000571627 MYBBP1AQ9BQG0 1328 aaKnown RBP19.36■□□□□ 0.69
LITAF-208ENST00000571627 MCM10Q7L590 875 aa19.36■□□□□ 0.69
LITAF-208ENST00000571627 RPS6KA4O75676 772 aa19.35■□□□□ 0.69
LITAF-208ENST00000571627 DCTN1Q14203 1278 aa19.35■□□□□ 0.69
LITAF-208ENST00000571627 TRAPPC3LQ5T215 181 aa19.35■□□□□ 0.69
LITAF-208ENST00000571627 TTC5Q8N0Z6 440 aa19.34■□□□□ 0.69
LITAF-208ENST00000571627 ARHGEF1Q92888 912 aaKnown RBP19.34■□□□□ 0.69
LITAF-208ENST00000571627 INTS5Q6P9B9 1019 aaKnown RBP19.33■□□□□ 0.68
LITAF-208ENST00000571627 NLGN2Q8NFZ4 835 aa19.33■□□□□ 0.68
LITAF-208ENST00000571627 RTF1Q92541 710 aaKnown RBP19.33■□□□□ 0.68
LITAF-208ENST00000571627 PLEKHF1Q96S99 279 aa19.33■□□□□ 0.68
LITAF-208ENST00000571627 CYP19A1P11511 503 aaPredicted RBP19.32■□□□□ 0.68
LITAF-208ENST00000571627 ZNF790Q6PG37 636 aa19.32■□□□□ 0.68
LITAF-208ENST00000571627 ZNF496Q96IT1 587 aaPredicted RBP19.32■□□□□ 0.68
LITAF-208ENST00000571627 CCDC87Q9NVE4 849 aa19.32■□□□□ 0.68
LITAF-208ENST00000571627 DCAF8L1A6NGE4 600 aa19.31■□□□□ 0.68
LITAF-208ENST00000571627 KCNQ3O43525 872 aa19.31■□□□□ 0.68
LITAF-208ENST00000571627 NEFMP07197 916 aa19.31■□□□□ 0.68
LITAF-208ENST00000571627 ADRA2BP18089 450 aa19.31■□□□□ 0.68
LITAF-208ENST00000571627 RFC4P35249 363 aa19.31■□□□□ 0.68
LITAF-208ENST00000571627 PRKRIP1Q9H875 184 aaPredicted RBP19.31■□□□□ 0.68
LITAF-208ENST00000571627 BTBD11A6QL63 1104 aa19.3■□□□□ 0.68
LITAF-208ENST00000571627 VSIG10Q8N0Z9 540 aa19.3■□□□□ 0.68
LITAF-208ENST00000571627 SRP68Q9UHB9 627 aaKnown RBP19.3■□□□□ 0.68
LITAF-208ENST00000571627 HEG1Q9ULI3 1381 aa19.3■□□□□ 0.68
LITAF-208ENST00000571627 MAPK8IP3Q9UPT6 1336 aa19.29■□□□□ 0.68
LITAF-208ENST00000571627 ZBTB1Q9Y2K1 713 aa19.29■□□□□ 0.68
LITAF-208ENST00000571627 GOLGB1Q14789 3259 aaKnown RBP19.29■□□□□ 0.68
LITAF-208ENST00000571627 SOS1Q07889 1333 aaPredicted RBP19.28■□□□□ 0.68
LITAF-208ENST00000571627 MMP10P09238 476 aa19.28■□□□□ 0.68
LITAF-208ENST00000571627 GYS1P13807 737 aa19.28■□□□□ 0.68
LITAF-208ENST00000571627 NFE2L2Q16236 605 aa19.28■□□□□ 0.68
LITAF-208ENST00000571627 HTATSF1O43719 755 aaKnown RBP19.27■□□□□ 0.68
LITAF-208ENST00000571627 FMNL2Q96PY5 1086 aa19.27■□□□□ 0.68
LITAF-208ENST00000571627 UTRNP46939 3433 aa19.27■□□□□ 0.68
LITAF-208ENST00000571627 KDM3BQ7LBC6 1761 aa19.27■□□□□ 0.67
LITAF-208ENST00000571627 USP42Q9H9J4 1324 aaKnown RBP19.26■□□□□ 0.67
LITAF-208ENST00000571627 THUMPD2Q9BTF0 503 aaKnown RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms